Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2G5K:A20:B3
Extra
PDB:
ATOM 1 O3' C A 19 -15.598 5.355 98.492 1.00 96.38 O
ATOM 2 P G A 20 -16.798 5.106 99.524 1.00 92.26 P
ATOM 3 OP1 G A 20 -16.246 4.280 100.635 1.00 97.93 O
ATOM 4 OP2 G A 20 -17.957 4.611 98.733 1.00 71.21 O
ATOM 5 O5' G A 20 -17.140 6.557 100.089 1.00 66.87 O
ATOM 6 C5' G A 20 -16.289 7.172 101.044 1.00 65.84 C
ATOM 7 C4' G A 20 -16.730 8.591 101.330 1.00 80.95 C
ATOM 8 O4' G A 20 -16.876 9.320 100.082 1.00 92.63 O
ATOM 9 C3' G A 20 -18.090 8.804 101.970 1.00 86.32 C
ATOM 10 O3' G A 20 -18.085 8.573 103.363 1.00 94.94 O
ATOM 11 C2' G A 20 -18.318 10.282 101.701 1.00 82.95 C
ATOM 12 O2' G A 20 -17.581 11.123 102.570 1.00 56.52 O
ATOM 13 C1' G A 20 -17.784 10.396 100.277 1.00 81.24 C
ATOM 14 N9 G A 20 -18.874 10.286 99.319 1.00 63.89 N
ATOM 15 C8 G A 20 -19.164 9.246 98.471 1.00 54.77 C
ATOM 16 N7 G A 20 -20.207 9.481 97.716 1.00 65.13 N
ATOM 17 C5 G A 20 -20.628 10.749 98.098 1.00 43.35 C
ATOM 18 C6 G A 20 -21.701 11.547 97.623 1.00 51.18 C
ATOM 19 O6 G A 20 -22.511 11.294 96.720 1.00 59.70 O
ATOM 20 N1 G A 20 -21.774 12.760 98.299 1.00 41.57 N
ATOM 21 C2 G A 20 -20.921 13.163 99.291 1.00 56.44 C
ATOM 22 N2 G A 20 -21.154 14.371 99.818 1.00 45.34 N
ATOM 23 N3 G A 20 -19.909 12.435 99.735 1.00 62.41 N
ATOM 24 C4 G A 20 -19.824 11.250 99.095 1.00 59.31 C
ATOM 25 P C A 21 -19.469 8.253 104.107 1.00 89.81 P
ATOM 26 OP1 C A 21 -19.145 8.036 105.544 1.00 79.63 O
ATOM 27 OP2 C A 21 -20.149 7.185 103.326 1.00 47.25 O
ATOM 28 O5' C A 21 -20.300 9.608 103.993 1.00 62.40 O
TER
ATOM 1 O3' C B 2 -23.381 20.790 95.699 1.00 80.54 O
ATOM 2 P G B 3 -22.124 20.692 94.693 1.00 85.27 P
ATOM 3 OP1 G B 3 -21.700 22.070 94.348 1.00 65.06 O
ATOM 4 OP2 G B 3 -22.424 19.722 93.610 1.00 60.04 O
ATOM 5 O5' G B 3 -20.978 20.045 95.585 1.00 89.68 O
ATOM 6 C5' G B 3 -20.454 20.731 96.715 1.00 75.95 C
ATOM 7 C4' G B 3 -19.478 19.843 97.431 1.00 63.89 C
ATOM 8 O4' G B 3 -20.177 18.641 97.846 1.00 60.65 O
ATOM 9 C3' G B 3 -18.381 19.292 96.545 1.00 80.06 C
ATOM 10 O3' G B 3 -17.337 20.225 96.338 1.00 79.69 O
ATOM 11 C2' G B 3 -17.946 18.060 97.320 1.00 70.85 C
ATOM 12 O2' G B 3 -17.155 18.378 98.445 1.00 97.90 O
ATOM 13 C1' G B 3 -19.300 17.527 97.780 1.00 57.99 C
ATOM 14 N9 G B 3 -19.865 16.566 96.843 1.00 51.11 N
ATOM 15 C8 G B 3 -20.908 16.772 95.975 1.00 46.96 C
ATOM 16 N7 G B 3 -21.175 15.723 95.238 1.00 72.69 N
ATOM 17 C5 G B 3 -20.253 14.768 95.648 1.00 36.90 C
ATOM 18 C6 G B 3 -20.043 13.441 95.195 1.00 58.52 C
ATOM 19 O6 G B 3 -20.656 12.817 94.316 1.00 63.91 O
ATOM 20 N1 G B 3 -18.994 12.830 95.876 1.00 51.79 N
ATOM 21 C2 G B 3 -18.243 13.419 96.861 1.00 63.84 C
ATOM 22 N2 G B 3 -17.282 12.653 97.402 1.00 58.74 N
ATOM 23 N3 G B 3 -18.424 14.663 97.286 1.00 47.55 N
ATOM 24 C4 G B 3 -19.441 15.270 96.643 1.00 43.88 C
ATOM 25 P U B 4 -16.581 20.242 94.926 1.00 72.96 P
ATOM 26 OP1 U B 4 -15.463 21.208 95.039 1.00 83.35 O
ATOM 27 OP2 U B 4 -17.587 20.417 93.854 1.00 83.57 O
ATOM 28 O5' U B 4 -15.986 18.765 94.812 1.00 81.40 O
TER
ATOM 2 P G A 20 -16.798 5.106 99.524 1.00 92.26 P
ATOM 3 OP1 G A 20 -16.246 4.280 100.635 1.00 97.93 O
ATOM 4 OP2 G A 20 -17.957 4.611 98.733 1.00 71.21 O
ATOM 5 O5' G A 20 -17.140 6.557 100.089 1.00 66.87 O
ATOM 6 C5' G A 20 -16.289 7.172 101.044 1.00 65.84 C
ATOM 7 C4' G A 20 -16.730 8.591 101.330 1.00 80.95 C
ATOM 8 O4' G A 20 -16.876 9.320 100.082 1.00 92.63 O
ATOM 9 C3' G A 20 -18.090 8.804 101.970 1.00 86.32 C
ATOM 10 O3' G A 20 -18.085 8.573 103.363 1.00 94.94 O
ATOM 11 C2' G A 20 -18.318 10.282 101.701 1.00 82.95 C
ATOM 12 O2' G A 20 -17.581 11.123 102.570 1.00 56.52 O
ATOM 13 C1' G A 20 -17.784 10.396 100.277 1.00 81.24 C
ATOM 14 N9 G A 20 -18.874 10.286 99.319 1.00 63.89 N
ATOM 15 C8 G A 20 -19.164 9.246 98.471 1.00 54.77 C
ATOM 16 N7 G A 20 -20.207 9.481 97.716 1.00 65.13 N
ATOM 17 C5 G A 20 -20.628 10.749 98.098 1.00 43.35 C
ATOM 18 C6 G A 20 -21.701 11.547 97.623 1.00 51.18 C
ATOM 19 O6 G A 20 -22.511 11.294 96.720 1.00 59.70 O
ATOM 20 N1 G A 20 -21.774 12.760 98.299 1.00 41.57 N
ATOM 21 C2 G A 20 -20.921 13.163 99.291 1.00 56.44 C
ATOM 22 N2 G A 20 -21.154 14.371 99.818 1.00 45.34 N
ATOM 23 N3 G A 20 -19.909 12.435 99.735 1.00 62.41 N
ATOM 24 C4 G A 20 -19.824 11.250 99.095 1.00 59.31 C
ATOM 25 P C A 21 -19.469 8.253 104.107 1.00 89.81 P
ATOM 26 OP1 C A 21 -19.145 8.036 105.544 1.00 79.63 O
ATOM 27 OP2 C A 21 -20.149 7.185 103.326 1.00 47.25 O
ATOM 28 O5' C A 21 -20.300 9.608 103.993 1.00 62.40 O
TER
ATOM 1 O3' C B 2 -23.381 20.790 95.699 1.00 80.54 O
ATOM 2 P G B 3 -22.124 20.692 94.693 1.00 85.27 P
ATOM 3 OP1 G B 3 -21.700 22.070 94.348 1.00 65.06 O
ATOM 4 OP2 G B 3 -22.424 19.722 93.610 1.00 60.04 O
ATOM 5 O5' G B 3 -20.978 20.045 95.585 1.00 89.68 O
ATOM 6 C5' G B 3 -20.454 20.731 96.715 1.00 75.95 C
ATOM 7 C4' G B 3 -19.478 19.843 97.431 1.00 63.89 C
ATOM 8 O4' G B 3 -20.177 18.641 97.846 1.00 60.65 O
ATOM 9 C3' G B 3 -18.381 19.292 96.545 1.00 80.06 C
ATOM 10 O3' G B 3 -17.337 20.225 96.338 1.00 79.69 O
ATOM 11 C2' G B 3 -17.946 18.060 97.320 1.00 70.85 C
ATOM 12 O2' G B 3 -17.155 18.378 98.445 1.00 97.90 O
ATOM 13 C1' G B 3 -19.300 17.527 97.780 1.00 57.99 C
ATOM 14 N9 G B 3 -19.865 16.566 96.843 1.00 51.11 N
ATOM 15 C8 G B 3 -20.908 16.772 95.975 1.00 46.96 C
ATOM 16 N7 G B 3 -21.175 15.723 95.238 1.00 72.69 N
ATOM 17 C5 G B 3 -20.253 14.768 95.648 1.00 36.90 C
ATOM 18 C6 G B 3 -20.043 13.441 95.195 1.00 58.52 C
ATOM 19 O6 G B 3 -20.656 12.817 94.316 1.00 63.91 O
ATOM 20 N1 G B 3 -18.994 12.830 95.876 1.00 51.79 N
ATOM 21 C2 G B 3 -18.243 13.419 96.861 1.00 63.84 C
ATOM 22 N2 G B 3 -17.282 12.653 97.402 1.00 58.74 N
ATOM 23 N3 G B 3 -18.424 14.663 97.286 1.00 47.55 N
ATOM 24 C4 G B 3 -19.441 15.270 96.643 1.00 43.88 C
ATOM 25 P U B 4 -16.581 20.242 94.926 1.00 72.96 P
ATOM 26 OP1 U B 4 -15.463 21.208 95.039 1.00 83.35 O
ATOM 27 OP2 U B 4 -17.587 20.417 93.854 1.00 83.57 O
ATOM 28 O5' U B 4 -15.986 18.765 94.812 1.00 81.40 O
TER
Atoms:
OP1: (-16.246,4.280,100.635)
OP2: (-17.957,4.611,98.733)
C3': (-18.090,8.804,101.970)
C1': (-17.784,10.396,100.277)
C5': (-16.289,7.172,101.044)
O6: (-22.511,11.294,96.720)
O4': (-16.876,9.320,100.082)
C8: (-19.164,9.246,98.471)
C2: (-20.921,13.163,99.291)
C6: (-21.701,11.547,97.623)
C5: (-20.628,10.749,98.098)
C4: (-19.824,11.250,99.095)
P: (-16.798,5.106,99.524)
C4': (-16.730,8.591,101.330)
C2': (-18.318,10.282,101.701)
O2': (-17.581,11.123,102.570)
N1: (-21.774,12.760,98.299)
N2: (-21.154,14.371,99.818)
N3: (-19.909,12.435,99.735)
N7: (-20.207,9.481,97.716)
N9: (-18.874,10.286,99.319)
O5': (-17.140,6.557,100.089)
O3': (-18.085,8.573,103.363)
OP2: (-17.957,4.611,98.733)
C3': (-18.090,8.804,101.970)
C1': (-17.784,10.396,100.277)
C5': (-16.289,7.172,101.044)
O6: (-22.511,11.294,96.720)
O4': (-16.876,9.320,100.082)
C8: (-19.164,9.246,98.471)
C2: (-20.921,13.163,99.291)
C6: (-21.701,11.547,97.623)
C5: (-20.628,10.749,98.098)
C4: (-19.824,11.250,99.095)
P: (-16.798,5.106,99.524)
C4': (-16.730,8.591,101.330)
C2': (-18.318,10.282,101.701)
O2': (-17.581,11.123,102.570)
N1: (-21.774,12.760,98.299)
N2: (-21.154,14.371,99.818)
N3: (-19.909,12.435,99.735)
N7: (-20.207,9.481,97.716)
N9: (-18.874,10.286,99.319)
O5': (-17.140,6.557,100.089)
O3': (-18.085,8.573,103.363)
OP1: (-21.700,22.070,94.348)
OP2: (-22.424,19.722,93.610)
C3': (-18.381,19.292,96.545)
C1': (-19.300,17.527,97.780)
C5': (-20.454,20.731,96.715)
O6: (-20.656,12.817,94.316)
O4': (-20.177,18.641,97.846)
C8: (-20.908,16.772,95.975)
C2: (-18.243,13.419,96.861)
C6: (-20.043,13.441,95.195)
C5: (-20.253,14.768,95.648)
C4: (-19.441,15.270,96.643)
P: (-22.124,20.692,94.693)
C4': (-19.478,19.843,97.431)
C2': (-17.946,18.060,97.320)
O2': (-17.155,18.378,98.445)
N1: (-18.994,12.830,95.876)
N2: (-17.282,12.653,97.402)
N3: (-18.424,14.663,97.286)
N7: (-21.175,15.723,95.238)
N9: (-19.865,16.566,96.843)
O5': (-20.978,20.045,95.585)
O3': (-17.337,20.225,96.338)
OP2: (-22.424,19.722,93.610)
C3': (-18.381,19.292,96.545)
C1': (-19.300,17.527,97.780)
C5': (-20.454,20.731,96.715)
O6: (-20.656,12.817,94.316)
O4': (-20.177,18.641,97.846)
C8: (-20.908,16.772,95.975)
C2: (-18.243,13.419,96.861)
C6: (-20.043,13.441,95.195)
C5: (-20.253,14.768,95.648)
C4: (-19.441,15.270,96.643)
P: (-22.124,20.692,94.693)
C4': (-19.478,19.843,97.431)
C2': (-17.946,18.060,97.320)
O2': (-17.155,18.378,98.445)
N1: (-18.994,12.830,95.876)
N2: (-17.282,12.653,97.402)
N3: (-18.424,14.663,97.286)
N7: (-21.175,15.723,95.238)
N9: (-19.865,16.566,96.843)
O5': (-20.978,20.045,95.585)
O3': (-17.337,20.225,96.338)
Image (generated by PyMOL):