ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZFT:C15:D2

Extra

PDB:
ATOM 1 O3' C A 14 39.353 -4.630 43.592 1.00 51.11 O
ATOM 2 P G A 15 40.731 -5.150 42.941 1.00 56.54 P
ATOM 3 OP1 G A 15 40.687 -6.632 42.980 1.00 58.67 O
ATOM 4 OP2 G A 15 41.877 -4.430 43.559 1.00 55.01 O
ATOM 5 O5' G A 15 40.622 -4.695 41.421 1.00 55.13 O
ATOM 6 C5' G A 15 39.554 -5.162 40.611 1.00 52.81 C
ATOM 7 C4' G A 15 39.596 -4.510 39.252 1.00 61.48 C
ATOM 8 O4' G A 15 39.274 -3.098 39.390 1.00 62.37 O
ATOM 9 C3' G A 15 40.949 -4.507 38.554 1.00 60.19 C
ATOM 10 O3' G A 15 41.247 -5.735 37.897 1.00 54.52 O
ATOM 11 C2' G A 15 40.787 -3.344 37.586 1.00 61.46 C
ATOM 12 O2' G A 15 39.981 -3.685 36.472 1.00 61.37 O
ATOM 13 C1' G A 15 40.026 -2.345 38.455 1.00 61.69 C
ATOM 14 N9 G A 15 40.952 -1.479 39.177 1.00 60.05 N
ATOM 15 C8 G A 15 41.347 -1.561 40.495 1.00 59.27 C
ATOM 16 N7 G A 15 42.216 -0.642 40.830 1.00 57.81 N
ATOM 17 C5 G A 15 42.394 0.096 39.666 1.00 58.15 C
ATOM 18 C6 G A 15 43.210 1.227 39.406 1.00 56.69 C
ATOM 19 O6 G A 15 43.948 1.842 40.186 1.00 54.98 O
ATOM 20 N1 G A 15 43.103 1.639 38.079 1.00 55.46 N
ATOM 21 C2 G A 15 42.303 1.050 37.127 1.00 58.36 C
ATOM 22 N2 G A 15 42.346 1.577 35.894 1.00 59.16 N
ATOM 23 N3 G A 15 41.523 0.016 37.362 1.00 57.22 N
ATOM 24 C4 G A 15 41.621 -0.410 38.639 1.00 59.32 C
ATOM 25 P A A 16 42.771 -6.232 37.793 1.00 61.36 P
ATOM 26 OP1 A A 16 42.701 -7.564 37.154 1.00 62.05 O
ATOM 27 OP2 A A 16 43.438 -6.081 39.108 1.00 58.28 O
ATOM 28 O5' A A 16 43.449 -5.183 36.801 1.00 60.29 O
TER

ATOM 1 O3' C B 1 43.030 8.739 33.387 1.00 48.86 O
ATOM 2 P G B 2 41.627 9.217 33.998 1.00 56.05 P
ATOM 3 OP1 G B 2 41.103 10.246 33.073 1.00 52.24 O
ATOM 4 OP2 G B 2 41.824 9.543 35.436 1.00 52.23 O
ATOM 5 O5' G B 2 40.694 7.931 33.903 1.00 56.98 O
ATOM 6 C5' G B 2 40.461 7.265 32.657 1.00 57.78 C
ATOM 7 C4' G B 2 39.821 5.919 32.907 1.00 58.23 C
ATOM 8 O4' G B 2 40.734 5.105 33.684 1.00 58.80 O
ATOM 9 C3' G B 2 38.550 5.956 33.735 1.00 59.78 C
ATOM 10 O3' G B 2 37.421 6.161 32.898 1.00 59.72 O
ATOM 11 C2' G B 2 38.524 4.565 34.351 1.00 56.51 C
ATOM 12 O2' G B 2 38.059 3.593 33.443 1.00 56.90 O
ATOM 13 C1' G B 2 40.009 4.323 34.614 1.00 55.85 C
ATOM 14 N9 G B 2 40.476 4.674 35.953 1.00 56.55 N
ATOM 15 C8 G B 2 41.277 5.742 36.294 1.00 55.54 C
ATOM 16 N7 G B 2 41.591 5.767 37.562 1.00 55.64 N
ATOM 17 C5 G B 2 40.947 4.657 38.095 1.00 53.23 C
ATOM 18 C6 G B 2 40.929 4.156 39.417 1.00 53.36 C
ATOM 19 O6 G B 2 41.501 4.609 40.423 1.00 53.21 O
ATOM 20 N1 G B 2 40.150 3.002 39.513 1.00 52.10 N
ATOM 21 C2 G B 2 39.478 2.402 38.471 1.00 54.35 C
ATOM 22 N2 G B 2 38.794 1.289 38.755 1.00 52.12 N
ATOM 23 N3 G B 2 39.484 2.861 37.238 1.00 52.80 N
ATOM 24 C4 G B 2 40.237 3.982 37.120 1.00 53.79 C
ATOM 25 P U B 3 36.104 6.850 33.499 1.00 63.07 P
ATOM 26 OP1 U B 3 35.124 7.025 32.394 1.00 60.39 O
ATOM 27 OP2 U B 3 36.549 8.024 34.287 1.00 60.85 O
ATOM 28 O5' U B 3 35.535 5.778 34.528 1.00 62.31 O
TER

Atoms:
OP1: (40.687,-6.632,42.980)
OP2: (41.877,-4.430,43.559)
C3': (40.949,-4.507,38.554)
C1': (40.026,-2.345,38.455)
C5': (39.554,-5.162,40.611)
O6: (43.948,1.842,40.186)
O4': (39.274,-3.098,39.390)
C8: (41.347,-1.561,40.495)
C2: (42.303,1.050,37.127)
C6: (43.210,1.227,39.406)
C5: (42.394,0.096,39.666)
C4: (41.621,-0.410,38.639)
P: (40.731,-5.150,42.941)
C4': (39.596,-4.510,39.252)
C2': (40.787,-3.344,37.586)
O2': (39.981,-3.685,36.472)
N1: (43.103,1.639,38.079)
N2: (42.346,1.577,35.894)
N3: (41.523,0.016,37.362)
N7: (42.216,-0.642,40.830)
N9: (40.952,-1.479,39.177)
O5': (40.622,-4.695,41.421)
O3': (41.247,-5.735,37.897)
OP1: (41.103,10.246,33.073)
OP2: (41.824,9.543,35.436)
C3': (38.550,5.956,33.735)
C1': (40.009,4.323,34.614)
C5': (40.461,7.265,32.657)
O6: (41.501,4.609,40.423)
O4': (40.734,5.105,33.684)
C8: (41.277,5.742,36.294)
C2: (39.478,2.402,38.471)
C6: (40.929,4.156,39.417)
C5: (40.947,4.657,38.095)
C4: (40.237,3.982,37.120)
P: (41.627,9.217,33.998)
C4': (39.821,5.919,32.907)
C2': (38.524,4.565,34.351)
O2': (38.059,3.593,33.443)
N1: (40.150,3.002,39.513)
N2: (38.794,1.289,38.755)
N3: (39.484,2.861,37.238)
N7: (41.591,5.767,37.562)
N9: (40.476,4.674,35.953)
O5': (40.694,7.931,33.903)
O3': (37.421,6.161,32.898)
Image (generated by PyMOL):
PyMOL image
show in jmol