Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1P79:A0:A2
Extra
PDB:
ATOM 1 P G A 0 0.131 8.284 19.858 1.00 17.33 P
ATOM 2 OP1 G A 0 -1.106 8.006 20.628 1.00 18.61 O
ATOM 3 OP2 G A 0 1.315 7.392 19.976 1.00 20.19 O
ATOM 4 O5' G A 0 -0.199 8.426 18.302 1.00 12.48 O
ATOM 5 C5' G A 0 0.808 8.688 17.341 1.00 9.34 C
ATOM 6 C4' G A 0 0.234 8.376 15.984 1.00 6.95 C
ATOM 7 O4' G A 0 -0.875 9.231 15.690 1.00 5.91 O
ATOM 8 C3' G A 0 1.159 8.486 14.788 1.00 5.16 C
ATOM 9 O3' G A 0 1.829 7.236 14.669 1.00 5.28 O
ATOM 10 C2' G A 0 0.194 8.717 13.634 1.00 4.77 C
ATOM 11 C1' G A 0 -1.037 9.342 14.281 1.00 4.90 C
ATOM 12 N9 G A 0 -1.261 10.760 14.007 1.00 4.37 N
ATOM 13 C8 G A 0 -2.480 11.395 13.952 1.00 3.46 C
ATOM 14 N7 G A 0 -2.406 12.675 13.775 1.00 3.57 N
ATOM 15 C5 G A 0 -1.053 12.934 13.722 1.00 3.84 C
ATOM 16 C6 G A 0 -0.386 14.157 13.569 1.00 2.91 C
ATOM 17 O6 G A 0 -0.879 15.286 13.438 1.00 3.31 O
ATOM 18 N1 G A 0 0.990 14.006 13.608 1.00 3.04 N
ATOM 19 C2 G A 0 1.640 12.797 13.794 1.00 3.43 C
ATOM 20 N2 G A 0 2.978 12.827 13.823 1.00 3.52 N
ATOM 21 N3 G A 0 1.017 11.637 13.939 1.00 4.08 N
ATOM 22 C4 G A 0 -0.329 11.779 13.878 1.00 4.00 C
ATOM 23 P U A 1 3.414 7.131 14.824 1.00 5.36 P
ATOM 24 OP1 U A 1 3.711 5.689 14.792 1.00 6.61 O
ATOM 25 OP2 U A 1 3.919 7.970 15.944 1.00 6.71 O
ATOM 26 O5' U A 1 3.973 7.862 13.540 1.00 4.94 O
TER
ATOM 1 O3' U B 1 2.132 8.362 9.630 1.00 4.88 O
ATOM 2 P G B 2 1.482 8.083 8.194 1.00 4.25 P
ATOM 3 OP1 G B 2 1.868 6.716 7.765 1.00 5.35 O
ATOM 4 OP2 G B 2 1.777 9.222 7.289 1.00 4.52 O
ATOM 5 O5' G B 2 -0.052 8.170 8.577 1.00 5.19 O
ATOM 6 C5' G B 2 -0.664 7.137 9.335 1.00 4.80 C
ATOM 7 C4' G B 2 -1.968 7.666 9.888 1.00 4.22 C
ATOM 8 O4' G B 2 -1.709 8.671 10.880 1.00 4.23 O
ATOM 9 C3' G B 2 -2.843 8.364 8.845 1.00 4.24 C
ATOM 10 O3' G B 2 -3.678 7.428 8.189 1.00 5.20 O
ATOM 11 C2' G B 2 -3.606 9.404 9.642 1.00 4.19 C
ATOM 12 O2' G B 2 -4.714 8.834 10.326 1.00 5.21 O
ATOM 13 C1' G B 2 -2.546 9.782 10.631 1.00 4.47 C
ATOM 14 N9 G B 2 -1.707 10.942 10.367 1.00 3.48 N
ATOM 15 C8 G B 2 -0.329 10.987 10.393 1.00 4.20 C
ATOM 16 N7 G B 2 0.156 12.196 10.333 1.00 3.57 N
ATOM 17 C5 G B 2 -0.980 13.000 10.309 1.00 3.14 C
ATOM 18 C6 G B 2 -1.107 14.391 10.311 1.00 3.07 C
ATOM 19 O6 G B 2 -0.176 15.242 10.318 1.00 3.07 O
ATOM 20 N1 G B 2 -2.418 14.834 10.319 1.00 3.00 N
ATOM 21 C2 G B 2 -3.503 13.987 10.320 1.00 3.02 C
ATOM 22 N2 G B 2 -4.710 14.576 10.267 1.00 3.38 N
ATOM 23 N3 G B 2 -3.401 12.672 10.343 1.00 3.56 N
ATOM 24 C4 G B 2 -2.124 12.240 10.354 1.00 3.03 C
ATOM 25 P G B 3 -3.567 7.195 6.624 1.00 5.32 P
ATOM 26 OP1 G B 3 -4.275 5.925 6.364 1.00 6.13 O
ATOM 27 OP2 G B 3 -2.178 7.359 6.179 1.00 6.45 O
ATOM 28 O5' G B 3 -4.394 8.402 6.000 1.00 5.18 O
TER
ATOM 2 OP1 G A 0 -1.106 8.006 20.628 1.00 18.61 O
ATOM 3 OP2 G A 0 1.315 7.392 19.976 1.00 20.19 O
ATOM 4 O5' G A 0 -0.199 8.426 18.302 1.00 12.48 O
ATOM 5 C5' G A 0 0.808 8.688 17.341 1.00 9.34 C
ATOM 6 C4' G A 0 0.234 8.376 15.984 1.00 6.95 C
ATOM 7 O4' G A 0 -0.875 9.231 15.690 1.00 5.91 O
ATOM 8 C3' G A 0 1.159 8.486 14.788 1.00 5.16 C
ATOM 9 O3' G A 0 1.829 7.236 14.669 1.00 5.28 O
ATOM 10 C2' G A 0 0.194 8.717 13.634 1.00 4.77 C
ATOM 11 C1' G A 0 -1.037 9.342 14.281 1.00 4.90 C
ATOM 12 N9 G A 0 -1.261 10.760 14.007 1.00 4.37 N
ATOM 13 C8 G A 0 -2.480 11.395 13.952 1.00 3.46 C
ATOM 14 N7 G A 0 -2.406 12.675 13.775 1.00 3.57 N
ATOM 15 C5 G A 0 -1.053 12.934 13.722 1.00 3.84 C
ATOM 16 C6 G A 0 -0.386 14.157 13.569 1.00 2.91 C
ATOM 17 O6 G A 0 -0.879 15.286 13.438 1.00 3.31 O
ATOM 18 N1 G A 0 0.990 14.006 13.608 1.00 3.04 N
ATOM 19 C2 G A 0 1.640 12.797 13.794 1.00 3.43 C
ATOM 20 N2 G A 0 2.978 12.827 13.823 1.00 3.52 N
ATOM 21 N3 G A 0 1.017 11.637 13.939 1.00 4.08 N
ATOM 22 C4 G A 0 -0.329 11.779 13.878 1.00 4.00 C
ATOM 23 P U A 1 3.414 7.131 14.824 1.00 5.36 P
ATOM 24 OP1 U A 1 3.711 5.689 14.792 1.00 6.61 O
ATOM 25 OP2 U A 1 3.919 7.970 15.944 1.00 6.71 O
ATOM 26 O5' U A 1 3.973 7.862 13.540 1.00 4.94 O
TER
ATOM 1 O3' U B 1 2.132 8.362 9.630 1.00 4.88 O
ATOM 2 P G B 2 1.482 8.083 8.194 1.00 4.25 P
ATOM 3 OP1 G B 2 1.868 6.716 7.765 1.00 5.35 O
ATOM 4 OP2 G B 2 1.777 9.222 7.289 1.00 4.52 O
ATOM 5 O5' G B 2 -0.052 8.170 8.577 1.00 5.19 O
ATOM 6 C5' G B 2 -0.664 7.137 9.335 1.00 4.80 C
ATOM 7 C4' G B 2 -1.968 7.666 9.888 1.00 4.22 C
ATOM 8 O4' G B 2 -1.709 8.671 10.880 1.00 4.23 O
ATOM 9 C3' G B 2 -2.843 8.364 8.845 1.00 4.24 C
ATOM 10 O3' G B 2 -3.678 7.428 8.189 1.00 5.20 O
ATOM 11 C2' G B 2 -3.606 9.404 9.642 1.00 4.19 C
ATOM 12 O2' G B 2 -4.714 8.834 10.326 1.00 5.21 O
ATOM 13 C1' G B 2 -2.546 9.782 10.631 1.00 4.47 C
ATOM 14 N9 G B 2 -1.707 10.942 10.367 1.00 3.48 N
ATOM 15 C8 G B 2 -0.329 10.987 10.393 1.00 4.20 C
ATOM 16 N7 G B 2 0.156 12.196 10.333 1.00 3.57 N
ATOM 17 C5 G B 2 -0.980 13.000 10.309 1.00 3.14 C
ATOM 18 C6 G B 2 -1.107 14.391 10.311 1.00 3.07 C
ATOM 19 O6 G B 2 -0.176 15.242 10.318 1.00 3.07 O
ATOM 20 N1 G B 2 -2.418 14.834 10.319 1.00 3.00 N
ATOM 21 C2 G B 2 -3.503 13.987 10.320 1.00 3.02 C
ATOM 22 N2 G B 2 -4.710 14.576 10.267 1.00 3.38 N
ATOM 23 N3 G B 2 -3.401 12.672 10.343 1.00 3.56 N
ATOM 24 C4 G B 2 -2.124 12.240 10.354 1.00 3.03 C
ATOM 25 P G B 3 -3.567 7.195 6.624 1.00 5.32 P
ATOM 26 OP1 G B 3 -4.275 5.925 6.364 1.00 6.13 O
ATOM 27 OP2 G B 3 -2.178 7.359 6.179 1.00 6.45 O
ATOM 28 O5' G B 3 -4.394 8.402 6.000 1.00 5.18 O
TER
Atoms:
OP1: (-1.106,8.006,20.628)
OP2: (1.315,7.392,19.976)
C3': (1.159,8.486,14.788)
C1': (-1.037,9.342,14.281)
C5': (0.808,8.688,17.341)
O6: (-0.879,15.286,13.438)
O4': (-0.875,9.231,15.690)
C8: (-2.480,11.395,13.952)
C2: (1.640,12.797,13.794)
C6: (-0.386,14.157,13.569)
C5: (-1.053,12.934,13.722)
C4: (-0.329,11.779,13.878)
P: (0.131,8.284,19.858)
C4': (0.234,8.376,15.984)
C2': (0.194,8.717,13.634)
N1: (0.990,14.006,13.608)
N2: (2.978,12.827,13.823)
N3: (1.017,11.637,13.939)
N7: (-2.406,12.675,13.775)
N9: (-1.261,10.760,14.007)
O5': (-0.199,8.426,18.302)
O3': (1.829,7.236,14.669)
OP2: (1.315,7.392,19.976)
C3': (1.159,8.486,14.788)
C1': (-1.037,9.342,14.281)
C5': (0.808,8.688,17.341)
O6: (-0.879,15.286,13.438)
O4': (-0.875,9.231,15.690)
C8: (-2.480,11.395,13.952)
C2: (1.640,12.797,13.794)
C6: (-0.386,14.157,13.569)
C5: (-1.053,12.934,13.722)
C4: (-0.329,11.779,13.878)
P: (0.131,8.284,19.858)
C4': (0.234,8.376,15.984)
C2': (0.194,8.717,13.634)
N1: (0.990,14.006,13.608)
N2: (2.978,12.827,13.823)
N3: (1.017,11.637,13.939)
N7: (-2.406,12.675,13.775)
N9: (-1.261,10.760,14.007)
O5': (-0.199,8.426,18.302)
O3': (1.829,7.236,14.669)
OP1: (1.868,6.716,7.765)
OP2: (1.777,9.222,7.289)
C3': (-2.843,8.364,8.845)
C1': (-2.546,9.782,10.631)
C5': (-0.664,7.137,9.335)
O6: (-0.176,15.242,10.318)
O4': (-1.709,8.671,10.880)
C8: (-0.329,10.987,10.393)
C2: (-3.503,13.987,10.320)
C6: (-1.107,14.391,10.311)
C5: (-0.980,13.000,10.309)
C4: (-2.124,12.240,10.354)
P: (1.482,8.083,8.194)
C4': (-1.968,7.666,9.888)
C2': (-3.606,9.404,9.642)
O2': (-4.714,8.834,10.326)
N1: (-2.418,14.834,10.319)
N2: (-4.710,14.576,10.267)
N3: (-3.401,12.672,10.343)
N7: (0.156,12.196,10.333)
N9: (-1.707,10.942,10.367)
O5': (-0.052,8.170,8.577)
O3': (-3.678,7.428,8.189)
OP2: (1.777,9.222,7.289)
C3': (-2.843,8.364,8.845)
C1': (-2.546,9.782,10.631)
C5': (-0.664,7.137,9.335)
O6: (-0.176,15.242,10.318)
O4': (-1.709,8.671,10.880)
C8: (-0.329,10.987,10.393)
C2: (-3.503,13.987,10.320)
C6: (-1.107,14.391,10.311)
C5: (-0.980,13.000,10.309)
C4: (-2.124,12.240,10.354)
P: (1.482,8.083,8.194)
C4': (-1.968,7.666,9.888)
C2': (-3.606,9.404,9.642)
O2': (-4.714,8.834,10.326)
N1: (-2.418,14.834,10.319)
N2: (-4.710,14.576,10.267)
N3: (-3.401,12.672,10.343)
N7: (0.156,12.196,10.333)
N9: (-1.707,10.942,10.367)
O5': (-0.052,8.170,8.577)
O3': (-3.678,7.428,8.189)
Image (generated by PyMOL):