Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y59:Y28
Extra
PDB:
ATOM 1 O3' U A 58 4.785 26.032 44.841 1.00 29.01 O
ATOM 2 P A A 59 3.629 26.267 43.763 1.00 28.93 P
ATOM 3 OP1 A A 59 4.246 26.903 42.579 1.00 29.16 O
ATOM 4 OP2 A A 59 2.492 26.925 44.447 1.00 28.86 O
ATOM 5 O5' A A 59 3.180 24.779 43.378 1.00 28.95 O
ATOM 6 C5' A A 59 2.102 24.576 42.469 1.00 28.88 C
ATOM 7 C4' A A 59 1.837 23.096 42.260 1.00 28.70 C
ATOM 8 O4' A A 59 2.749 22.581 41.256 1.00 28.56 O
ATOM 9 C3' A A 59 2.045 22.230 43.495 1.00 28.64 C
ATOM 10 O3' A A 59 0.816 22.104 44.215 1.00 28.94 O
ATOM 11 C2' A A 59 2.499 20.899 42.901 1.00 28.61 C
ATOM 12 O2' A A 59 1.410 20.089 42.502 1.00 28.38 O
ATOM 13 C1' A A 59 3.279 21.335 41.666 1.00 28.10 C
ATOM 14 N9 A A 59 4.726 21.475 41.833 1.00 27.85 N
ATOM 15 C8 A A 59 5.436 22.643 41.862 1.00 27.63 C
ATOM 16 N7 A A 59 6.730 22.477 41.996 1.00 27.58 N
ATOM 17 C5 A A 59 6.886 21.102 42.043 1.00 27.63 C
ATOM 18 C6 A A 59 8.025 20.280 42.176 1.00 27.72 C
ATOM 19 N6 A A 59 9.270 20.757 42.284 1.00 27.46 N
ATOM 20 N1 A A 59 7.835 18.944 42.192 1.00 27.44 N
ATOM 21 C2 A A 59 6.587 18.472 42.083 1.00 27.44 C
ATOM 22 N3 A A 59 5.443 19.143 41.953 1.00 27.33 N
ATOM 23 C4 A A 59 5.662 20.467 41.940 1.00 27.70 C
ATOM 24 P A A 60 0.822 22.096 45.818 1.00 28.88 P
ATOM 25 OP1 A A 60 -0.577 22.067 46.296 1.00 29.05 O
ATOM 26 OP2 A A 60 1.722 23.178 46.270 1.00 28.76 O
ATOM 27 O5' A A 60 1.517 20.694 46.151 1.00 28.47 O
TER
ATOM 1 O3' G B 27 14.196 21.440 38.942 1.00 32.41 O
ATOM 2 P C B 28 15.245 21.522 40.145 1.00 32.21 P
ATOM 3 OP1 C B 28 15.652 22.934 40.317 1.00 32.72 O
ATOM 4 OP2 C B 28 16.269 20.475 39.924 1.00 32.38 O
ATOM 5 O5' C B 28 14.371 21.082 41.409 1.00 32.17 O
ATOM 6 C5' C B 28 13.318 21.917 41.868 1.00 31.38 C
ATOM 7 C4' C B 28 12.795 21.416 43.200 1.00 30.62 C
ATOM 8 O4' C B 28 12.164 20.122 43.030 1.00 30.12 O
ATOM 9 C3' C B 28 13.865 21.137 44.238 1.00 30.68 C
ATOM 10 O3' C B 28 14.306 22.342 44.840 1.00 30.56 O
ATOM 11 C2' C B 28 13.088 20.254 45.204 1.00 30.08 C
ATOM 12 O2' C B 28 12.187 20.996 45.999 1.00 30.48 O
ATOM 13 C1' C B 28 12.305 19.382 44.230 1.00 29.82 C
ATOM 14 N1 C B 28 12.964 18.076 43.934 1.00 29.26 N
ATOM 15 C2 C B 28 12.785 17.003 44.819 1.00 29.09 C
ATOM 16 O2 C B 28 12.087 17.156 45.833 1.00 28.55 O
ATOM 17 N3 C B 28 13.384 15.820 44.537 1.00 28.18 N
ATOM 18 C4 C B 28 14.130 15.692 43.438 1.00 28.92 C
ATOM 19 N4 C B 28 14.699 14.505 43.208 1.00 29.18 N
ATOM 20 C5 C B 28 14.330 16.775 42.529 1.00 28.69 C
ATOM 21 C6 C B 28 13.733 17.937 42.814 1.00 28.61 C
ATOM 22 P U B 29 15.853 22.513 45.212 1.00 30.85 P
ATOM 23 OP1 U B 29 16.085 23.946 45.499 1.00 31.18 O
ATOM 24 OP2 U B 29 16.657 21.828 44.177 1.00 30.05 O
ATOM 25 O5' U B 29 15.996 21.681 46.573 1.00 30.88 O
TER
ATOM 2 P A A 59 3.629 26.267 43.763 1.00 28.93 P
ATOM 3 OP1 A A 59 4.246 26.903 42.579 1.00 29.16 O
ATOM 4 OP2 A A 59 2.492 26.925 44.447 1.00 28.86 O
ATOM 5 O5' A A 59 3.180 24.779 43.378 1.00 28.95 O
ATOM 6 C5' A A 59 2.102 24.576 42.469 1.00 28.88 C
ATOM 7 C4' A A 59 1.837 23.096 42.260 1.00 28.70 C
ATOM 8 O4' A A 59 2.749 22.581 41.256 1.00 28.56 O
ATOM 9 C3' A A 59 2.045 22.230 43.495 1.00 28.64 C
ATOM 10 O3' A A 59 0.816 22.104 44.215 1.00 28.94 O
ATOM 11 C2' A A 59 2.499 20.899 42.901 1.00 28.61 C
ATOM 12 O2' A A 59 1.410 20.089 42.502 1.00 28.38 O
ATOM 13 C1' A A 59 3.279 21.335 41.666 1.00 28.10 C
ATOM 14 N9 A A 59 4.726 21.475 41.833 1.00 27.85 N
ATOM 15 C8 A A 59 5.436 22.643 41.862 1.00 27.63 C
ATOM 16 N7 A A 59 6.730 22.477 41.996 1.00 27.58 N
ATOM 17 C5 A A 59 6.886 21.102 42.043 1.00 27.63 C
ATOM 18 C6 A A 59 8.025 20.280 42.176 1.00 27.72 C
ATOM 19 N6 A A 59 9.270 20.757 42.284 1.00 27.46 N
ATOM 20 N1 A A 59 7.835 18.944 42.192 1.00 27.44 N
ATOM 21 C2 A A 59 6.587 18.472 42.083 1.00 27.44 C
ATOM 22 N3 A A 59 5.443 19.143 41.953 1.00 27.33 N
ATOM 23 C4 A A 59 5.662 20.467 41.940 1.00 27.70 C
ATOM 24 P A A 60 0.822 22.096 45.818 1.00 28.88 P
ATOM 25 OP1 A A 60 -0.577 22.067 46.296 1.00 29.05 O
ATOM 26 OP2 A A 60 1.722 23.178 46.270 1.00 28.76 O
ATOM 27 O5' A A 60 1.517 20.694 46.151 1.00 28.47 O
TER
ATOM 1 O3' G B 27 14.196 21.440 38.942 1.00 32.41 O
ATOM 2 P C B 28 15.245 21.522 40.145 1.00 32.21 P
ATOM 3 OP1 C B 28 15.652 22.934 40.317 1.00 32.72 O
ATOM 4 OP2 C B 28 16.269 20.475 39.924 1.00 32.38 O
ATOM 5 O5' C B 28 14.371 21.082 41.409 1.00 32.17 O
ATOM 6 C5' C B 28 13.318 21.917 41.868 1.00 31.38 C
ATOM 7 C4' C B 28 12.795 21.416 43.200 1.00 30.62 C
ATOM 8 O4' C B 28 12.164 20.122 43.030 1.00 30.12 O
ATOM 9 C3' C B 28 13.865 21.137 44.238 1.00 30.68 C
ATOM 10 O3' C B 28 14.306 22.342 44.840 1.00 30.56 O
ATOM 11 C2' C B 28 13.088 20.254 45.204 1.00 30.08 C
ATOM 12 O2' C B 28 12.187 20.996 45.999 1.00 30.48 O
ATOM 13 C1' C B 28 12.305 19.382 44.230 1.00 29.82 C
ATOM 14 N1 C B 28 12.964 18.076 43.934 1.00 29.26 N
ATOM 15 C2 C B 28 12.785 17.003 44.819 1.00 29.09 C
ATOM 16 O2 C B 28 12.087 17.156 45.833 1.00 28.55 O
ATOM 17 N3 C B 28 13.384 15.820 44.537 1.00 28.18 N
ATOM 18 C4 C B 28 14.130 15.692 43.438 1.00 28.92 C
ATOM 19 N4 C B 28 14.699 14.505 43.208 1.00 29.18 N
ATOM 20 C5 C B 28 14.330 16.775 42.529 1.00 28.69 C
ATOM 21 C6 C B 28 13.733 17.937 42.814 1.00 28.61 C
ATOM 22 P U B 29 15.853 22.513 45.212 1.00 30.85 P
ATOM 23 OP1 U B 29 16.085 23.946 45.499 1.00 31.18 O
ATOM 24 OP2 U B 29 16.657 21.828 44.177 1.00 30.05 O
ATOM 25 O5' U B 29 15.996 21.681 46.573 1.00 30.88 O
TER
Atoms:
OP1: (4.246,26.903,42.579)
OP2: (2.492,26.925,44.447)
C3': (2.045,22.230,43.495)
C1': (3.279,21.335,41.666)
C5': (2.102,24.576,42.469)
O4': (2.749,22.581,41.256)
C8: (5.436,22.643,41.862)
O2': (1.410,20.089,42.502)
C6: (8.025,20.280,42.176)
C5: (6.886,21.102,42.043)
C4: (5.662,20.467,41.940)
P: (3.629,26.267,43.763)
C4': (1.837,23.096,42.260)
C2': (2.499,20.899,42.901)
C2: (6.587,18.472,42.083)
N1: (7.835,18.944,42.192)
N3: (5.443,19.143,41.953)
N6: (9.270,20.757,42.284)
N7: (6.730,22.477,41.996)
N9: (4.726,21.475,41.833)
O5': (3.180,24.779,43.378)
O3': (0.816,22.104,44.215)
OP2: (2.492,26.925,44.447)
C3': (2.045,22.230,43.495)
C1': (3.279,21.335,41.666)
C5': (2.102,24.576,42.469)
O4': (2.749,22.581,41.256)
C8: (5.436,22.643,41.862)
O2': (1.410,20.089,42.502)
C6: (8.025,20.280,42.176)
C5: (6.886,21.102,42.043)
C4: (5.662,20.467,41.940)
P: (3.629,26.267,43.763)
C4': (1.837,23.096,42.260)
C2': (2.499,20.899,42.901)
C2: (6.587,18.472,42.083)
N1: (7.835,18.944,42.192)
N3: (5.443,19.143,41.953)
N6: (9.270,20.757,42.284)
N7: (6.730,22.477,41.996)
N9: (4.726,21.475,41.833)
O5': (3.180,24.779,43.378)
O3': (0.816,22.104,44.215)
C2: (12.785,17.003,44.819)
OP1: (15.652,22.934,40.317)
OP2: (16.269,20.475,39.924)
C4: (14.130,15.692,43.438)
O5': (14.371,21.082,41.409)
C3': (13.865,21.137,44.238)
C1': (12.305,19.382,44.230)
O4': (12.164,20.122,43.030)
C5': (13.318,21.917,41.868)
P: (15.245,21.522,40.145)
O2: (12.087,17.156,45.833)
C4': (12.795,21.416,43.200)
C2': (13.088,20.254,45.204)
O2': (12.187,20.996,45.999)
N1: (12.964,18.076,43.934)
N3: (13.384,15.820,44.537)
N4: (14.699,14.505,43.208)
C6: (13.733,17.937,42.814)
C5: (14.330,16.775,42.529)
O3': (14.306,22.342,44.840)
OP1: (15.652,22.934,40.317)
OP2: (16.269,20.475,39.924)
C4: (14.130,15.692,43.438)
O5': (14.371,21.082,41.409)
C3': (13.865,21.137,44.238)
C1': (12.305,19.382,44.230)
O4': (12.164,20.122,43.030)
C5': (13.318,21.917,41.868)
P: (15.245,21.522,40.145)
O2: (12.087,17.156,45.833)
C4': (12.795,21.416,43.200)
C2': (13.088,20.254,45.204)
O2': (12.187,20.996,45.999)
N1: (12.964,18.076,43.934)
N3: (13.384,15.820,44.537)
N4: (14.699,14.505,43.208)
C6: (13.733,17.937,42.814)
C5: (14.330,16.775,42.529)
O3': (14.306,22.342,44.840)
Image (generated by PyMOL):