Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3S4P:A19:B2
Extra
PDB:
ATOM 1 O3' C A 18 -11.371 6.721 33.293 1.00 56.77 O
ATOM 2 P G A 19 -11.929 5.214 33.203 1.00 59.11 P
ATOM 3 OP1 G A 19 -13.257 5.284 32.537 1.00 60.15 O
ATOM 4 OP2 G A 19 -11.825 4.590 34.549 1.00 59.63 O
ATOM 5 O5' G A 19 -10.895 4.484 32.235 1.00 56.35 O
ATOM 6 C5' G A 19 -10.748 4.904 30.885 1.00 56.55 C
ATOM 7 C4' G A 19 -9.647 4.125 30.213 1.00 57.23 C
ATOM 8 O4' G A 19 -8.358 4.528 30.747 1.00 56.80 O
ATOM 9 C3' G A 19 -9.678 2.627 30.442 1.00 59.33 C
ATOM 10 O3' G A 19 -10.616 1.984 29.585 1.00 63.08 O
ATOM 11 C2' G A 19 -8.238 2.241 30.133 1.00 58.83 C
ATOM 12 O2' G A 19 -7.979 2.184 28.746 1.00 59.48 O
ATOM 13 C1' G A 19 -7.474 3.415 30.752 1.00 57.41 C
ATOM 14 N9 G A 19 -7.065 3.158 32.131 1.00 56.27 N
ATOM 15 C8 G A 19 -7.699 3.593 33.272 1.00 56.31 C
ATOM 16 N7 G A 19 -7.116 3.185 34.371 1.00 55.32 N
ATOM 17 C5 G A 19 -6.029 2.441 33.931 1.00 53.43 C
ATOM 18 C6 G A 19 -5.039 1.749 34.668 1.00 52.71 C
ATOM 19 O6 G A 19 -4.925 1.643 35.895 1.00 52.69 O
ATOM 20 N1 G A 19 -4.118 1.132 33.831 1.00 52.48 N
ATOM 21 C2 G A 19 -4.149 1.168 32.459 1.00 53.04 C
ATOM 22 N2 G A 19 -3.172 0.496 31.833 1.00 51.39 N
ATOM 23 N3 G A 19 -5.071 1.811 31.755 1.00 52.28 N
ATOM 24 C4 G A 19 -5.975 2.420 32.551 1.00 53.94 C
ATOM 25 P C A 20 -10.938 0.417 29.783 1.00 66.50 P
ATOM 26 OP1 C A 20 -12.173 0.128 29.009 1.00 67.19 O
ATOM 27 OP2 C A 20 -10.889 0.072 31.227 1.00 65.91 O
ATOM 28 O5' C A 20 -9.714 -0.306 29.064 1.00 63.84 O
TER
ATOM 1 O3' C B 1 3.979 -0.897 32.453 1.00 65.55 O
ATOM 2 P G B 2 4.803 0.441 32.781 1.00 64.70 P
ATOM 3 OP1 G B 2 6.144 0.311 32.154 1.00 65.29 O
ATOM 4 OP2 G B 2 4.695 0.693 34.241 1.00 64.78 O
ATOM 5 O5' G B 2 3.993 1.555 31.986 1.00 62.92 O
ATOM 6 C5' G B 2 3.794 1.421 30.586 1.00 58.02 C
ATOM 7 C4' G B 2 2.518 2.098 30.168 1.00 55.17 C
ATOM 8 O4' G B 2 1.376 1.426 30.762 1.00 54.80 O
ATOM 9 C3' G B 2 2.340 3.517 30.658 1.00 54.59 C
ATOM 10 O3' G B 2 3.126 4.434 29.934 1.00 53.35 O
ATOM 11 C2' G B 2 0.845 3.722 30.465 1.00 54.33 C
ATOM 12 O2' G B 2 0.468 3.980 29.128 1.00 54.38 O
ATOM 13 C1' G B 2 0.311 2.361 30.916 1.00 54.05 C
ATOM 14 N9 G B 2 -0.061 2.421 32.321 1.00 51.54 N
ATOM 15 C8 G B 2 0.606 1.868 33.383 1.00 51.48 C
ATOM 16 N7 G B 2 0.054 2.150 34.533 1.00 52.07 N
ATOM 17 C5 G B 2 -1.047 2.926 34.204 1.00 50.18 C
ATOM 18 C6 G B 2 -2.020 3.531 35.031 1.00 50.96 C
ATOM 19 O6 G B 2 -2.107 3.508 36.267 1.00 53.64 O
ATOM 20 N1 G B 2 -2.965 4.224 34.284 1.00 51.08 N
ATOM 21 C2 G B 2 -2.976 4.316 32.915 1.00 50.76 C
ATOM 22 N2 G B 2 -3.982 5.019 32.378 1.00 49.67 N
ATOM 23 N3 G B 2 -2.068 3.759 32.132 1.00 50.60 N
ATOM 24 C4 G B 2 -1.140 3.086 32.841 1.00 50.70 C
ATOM 25 P U B 3 3.711 5.712 30.691 1.00 53.11 P
ATOM 26 OP1 U B 3 4.706 6.367 29.805 1.00 54.81 O
ATOM 27 OP2 U B 3 4.115 5.267 32.048 1.00 54.01 O
ATOM 28 O5' U B 3 2.447 6.665 30.828 1.00 51.89 O
TER
ATOM 2 P G A 19 -11.929 5.214 33.203 1.00 59.11 P
ATOM 3 OP1 G A 19 -13.257 5.284 32.537 1.00 60.15 O
ATOM 4 OP2 G A 19 -11.825 4.590 34.549 1.00 59.63 O
ATOM 5 O5' G A 19 -10.895 4.484 32.235 1.00 56.35 O
ATOM 6 C5' G A 19 -10.748 4.904 30.885 1.00 56.55 C
ATOM 7 C4' G A 19 -9.647 4.125 30.213 1.00 57.23 C
ATOM 8 O4' G A 19 -8.358 4.528 30.747 1.00 56.80 O
ATOM 9 C3' G A 19 -9.678 2.627 30.442 1.00 59.33 C
ATOM 10 O3' G A 19 -10.616 1.984 29.585 1.00 63.08 O
ATOM 11 C2' G A 19 -8.238 2.241 30.133 1.00 58.83 C
ATOM 12 O2' G A 19 -7.979 2.184 28.746 1.00 59.48 O
ATOM 13 C1' G A 19 -7.474 3.415 30.752 1.00 57.41 C
ATOM 14 N9 G A 19 -7.065 3.158 32.131 1.00 56.27 N
ATOM 15 C8 G A 19 -7.699 3.593 33.272 1.00 56.31 C
ATOM 16 N7 G A 19 -7.116 3.185 34.371 1.00 55.32 N
ATOM 17 C5 G A 19 -6.029 2.441 33.931 1.00 53.43 C
ATOM 18 C6 G A 19 -5.039 1.749 34.668 1.00 52.71 C
ATOM 19 O6 G A 19 -4.925 1.643 35.895 1.00 52.69 O
ATOM 20 N1 G A 19 -4.118 1.132 33.831 1.00 52.48 N
ATOM 21 C2 G A 19 -4.149 1.168 32.459 1.00 53.04 C
ATOM 22 N2 G A 19 -3.172 0.496 31.833 1.00 51.39 N
ATOM 23 N3 G A 19 -5.071 1.811 31.755 1.00 52.28 N
ATOM 24 C4 G A 19 -5.975 2.420 32.551 1.00 53.94 C
ATOM 25 P C A 20 -10.938 0.417 29.783 1.00 66.50 P
ATOM 26 OP1 C A 20 -12.173 0.128 29.009 1.00 67.19 O
ATOM 27 OP2 C A 20 -10.889 0.072 31.227 1.00 65.91 O
ATOM 28 O5' C A 20 -9.714 -0.306 29.064 1.00 63.84 O
TER
ATOM 1 O3' C B 1 3.979 -0.897 32.453 1.00 65.55 O
ATOM 2 P G B 2 4.803 0.441 32.781 1.00 64.70 P
ATOM 3 OP1 G B 2 6.144 0.311 32.154 1.00 65.29 O
ATOM 4 OP2 G B 2 4.695 0.693 34.241 1.00 64.78 O
ATOM 5 O5' G B 2 3.993 1.555 31.986 1.00 62.92 O
ATOM 6 C5' G B 2 3.794 1.421 30.586 1.00 58.02 C
ATOM 7 C4' G B 2 2.518 2.098 30.168 1.00 55.17 C
ATOM 8 O4' G B 2 1.376 1.426 30.762 1.00 54.80 O
ATOM 9 C3' G B 2 2.340 3.517 30.658 1.00 54.59 C
ATOM 10 O3' G B 2 3.126 4.434 29.934 1.00 53.35 O
ATOM 11 C2' G B 2 0.845 3.722 30.465 1.00 54.33 C
ATOM 12 O2' G B 2 0.468 3.980 29.128 1.00 54.38 O
ATOM 13 C1' G B 2 0.311 2.361 30.916 1.00 54.05 C
ATOM 14 N9 G B 2 -0.061 2.421 32.321 1.00 51.54 N
ATOM 15 C8 G B 2 0.606 1.868 33.383 1.00 51.48 C
ATOM 16 N7 G B 2 0.054 2.150 34.533 1.00 52.07 N
ATOM 17 C5 G B 2 -1.047 2.926 34.204 1.00 50.18 C
ATOM 18 C6 G B 2 -2.020 3.531 35.031 1.00 50.96 C
ATOM 19 O6 G B 2 -2.107 3.508 36.267 1.00 53.64 O
ATOM 20 N1 G B 2 -2.965 4.224 34.284 1.00 51.08 N
ATOM 21 C2 G B 2 -2.976 4.316 32.915 1.00 50.76 C
ATOM 22 N2 G B 2 -3.982 5.019 32.378 1.00 49.67 N
ATOM 23 N3 G B 2 -2.068 3.759 32.132 1.00 50.60 N
ATOM 24 C4 G B 2 -1.140 3.086 32.841 1.00 50.70 C
ATOM 25 P U B 3 3.711 5.712 30.691 1.00 53.11 P
ATOM 26 OP1 U B 3 4.706 6.367 29.805 1.00 54.81 O
ATOM 27 OP2 U B 3 4.115 5.267 32.048 1.00 54.01 O
ATOM 28 O5' U B 3 2.447 6.665 30.828 1.00 51.89 O
TER
Atoms:
OP1: (-13.257,5.284,32.537)
OP2: (-11.825,4.590,34.549)
C3': (-9.678,2.627,30.442)
C1': (-7.474,3.415,30.752)
C5': (-10.748,4.904,30.885)
O6: (-4.925,1.643,35.895)
O4': (-8.358,4.528,30.747)
C8: (-7.699,3.593,33.272)
C2: (-4.149,1.168,32.459)
C6: (-5.039,1.749,34.668)
C5: (-6.029,2.441,33.931)
C4: (-5.975,2.420,32.551)
P: (-11.929,5.214,33.203)
C4': (-9.647,4.125,30.213)
C2': (-8.238,2.241,30.133)
O2': (-7.979,2.184,28.746)
N1: (-4.118,1.132,33.831)
N2: (-3.172,0.496,31.833)
N3: (-5.071,1.811,31.755)
N7: (-7.116,3.185,34.371)
N9: (-7.065,3.158,32.131)
O5': (-10.895,4.484,32.235)
O3': (-10.616,1.984,29.585)
OP2: (-11.825,4.590,34.549)
C3': (-9.678,2.627,30.442)
C1': (-7.474,3.415,30.752)
C5': (-10.748,4.904,30.885)
O6: (-4.925,1.643,35.895)
O4': (-8.358,4.528,30.747)
C8: (-7.699,3.593,33.272)
C2: (-4.149,1.168,32.459)
C6: (-5.039,1.749,34.668)
C5: (-6.029,2.441,33.931)
C4: (-5.975,2.420,32.551)
P: (-11.929,5.214,33.203)
C4': (-9.647,4.125,30.213)
C2': (-8.238,2.241,30.133)
O2': (-7.979,2.184,28.746)
N1: (-4.118,1.132,33.831)
N2: (-3.172,0.496,31.833)
N3: (-5.071,1.811,31.755)
N7: (-7.116,3.185,34.371)
N9: (-7.065,3.158,32.131)
O5': (-10.895,4.484,32.235)
O3': (-10.616,1.984,29.585)
OP1: (6.144,0.311,32.154)
OP2: (4.695,0.693,34.241)
C3': (2.340,3.517,30.658)
C1': (0.311,2.361,30.916)
C5': (3.794,1.421,30.586)
O6: (-2.107,3.508,36.267)
O4': (1.376,1.426,30.762)
C8: (0.606,1.868,33.383)
C2: (-2.976,4.316,32.915)
C6: (-2.020,3.531,35.031)
C5: (-1.047,2.926,34.204)
C4: (-1.140,3.086,32.841)
P: (4.803,0.441,32.781)
C4': (2.518,2.098,30.168)
C2': (0.845,3.722,30.465)
O2': (0.468,3.980,29.128)
N1: (-2.965,4.224,34.284)
N2: (-3.982,5.019,32.378)
N3: (-2.068,3.759,32.132)
N7: (0.054,2.150,34.533)
N9: (-0.061,2.421,32.321)
O5': (3.993,1.555,31.986)
O3': (3.126,4.434,29.934)
OP2: (4.695,0.693,34.241)
C3': (2.340,3.517,30.658)
C1': (0.311,2.361,30.916)
C5': (3.794,1.421,30.586)
O6: (-2.107,3.508,36.267)
O4': (1.376,1.426,30.762)
C8: (0.606,1.868,33.383)
C2: (-2.976,4.316,32.915)
C6: (-2.020,3.531,35.031)
C5: (-1.047,2.926,34.204)
C4: (-1.140,3.086,32.841)
P: (4.803,0.441,32.781)
C4': (2.518,2.098,30.168)
C2': (0.845,3.722,30.465)
O2': (0.468,3.980,29.128)
N1: (-2.965,4.224,34.284)
N2: (-3.982,5.019,32.378)
N3: (-2.068,3.759,32.132)
N7: (0.054,2.150,34.533)
N9: (-0.061,2.421,32.321)
O5': (3.993,1.555,31.986)
O3': (3.126,4.434,29.934)
Image (generated by PyMOL):