Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BNL:A20:B3
Extra
PDB:
ATOM 1 O3' C A 19 55.271 -2.465 19.163 1.00 74.89 O
ATOM 2 P G A 20 54.087 -3.111 20.052 1.00 75.60 P
ATOM 3 OP1 G A 20 54.688 -3.519 21.349 1.00 79.80 O
ATOM 4 OP2 G A 20 53.386 -4.123 19.222 1.00 83.86 O
ATOM 5 O5' G A 20 53.068 -1.909 20.309 1.00 54.88 O
ATOM 6 C5' G A 20 53.427 -0.820 21.152 1.00 54.93 C
ATOM 7 C4' G A 20 52.365 0.257 21.126 1.00 54.03 C
ATOM 8 O4' G A 20 52.183 0.738 19.767 1.00 62.10 O
ATOM 9 C3' G A 20 50.959 -0.137 21.540 1.00 49.89 C
ATOM 10 O3' G A 20 50.815 -0.161 22.950 1.00 52.34 O
ATOM 11 C2' G A 20 50.138 0.996 20.940 1.00 52.73 C
ATOM 12 O2' G A 20 50.214 2.179 21.705 1.00 45.77 O
ATOM 13 C1' G A 20 50.855 1.214 19.609 1.00 45.64 C
ATOM 14 N9 G A 20 50.217 0.498 18.505 1.00 42.95 N
ATOM 15 C8 G A 20 50.614 -0.684 17.923 1.00 41.15 C
ATOM 16 N7 G A 20 49.833 -1.063 16.944 1.00 40.52 N
ATOM 17 C5 G A 20 48.859 -0.072 16.880 1.00 34.28 C
ATOM 18 C6 G A 20 47.741 0.066 16.017 1.00 30.62 C
ATOM 19 O6 G A 20 47.367 -0.687 15.106 1.00 27.91 O
ATOM 20 N1 G A 20 47.023 1.222 16.298 1.00 27.36 N
ATOM 21 C2 G A 20 47.336 2.130 17.281 1.00 33.41 C
ATOM 22 N2 G A 20 46.526 3.195 17.397 1.00 29.03 N
ATOM 23 N3 G A 20 48.368 2.010 18.092 1.00 25.77 N
ATOM 24 C4 G A 20 49.081 0.895 17.838 1.00 33.36 C
ATOM 25 P C A 21 49.666 -1.064 23.611 1.00 48.97 P
ATOM 26 OP1 C A 21 49.874 -1.074 25.082 1.00 68.52 O
ATOM 27 OP2 C A 21 49.608 -2.352 22.862 1.00 32.26 O
ATOM 28 O5' C A 21 48.333 -0.247 23.336 1.00 44.46 O
TER
ATOM 1 O3' C B 2 43.043 7.327 11.929 1.00 41.08 O
ATOM 2 P G B 3 44.412 7.625 11.159 1.00 48.70 P
ATOM 3 OP1 G B 3 44.263 8.968 10.546 1.00 42.56 O
ATOM 4 OP2 G B 3 44.752 6.442 10.311 1.00 24.60 O
ATOM 5 O5' G B 3 45.504 7.691 12.314 1.00 43.73 O
ATOM 6 C5' G B 3 45.372 8.599 13.399 1.00 42.89 C
ATOM 7 C4' G B 3 46.377 8.264 14.470 1.00 38.59 C
ATOM 8 O4' G B 3 46.116 6.915 14.945 1.00 43.78 O
ATOM 9 C3' G B 3 47.818 8.200 13.995 1.00 43.09 C
ATOM 10 O3' G B 3 48.432 9.478 13.975 1.00 50.38 O
ATOM 11 C2' G B 3 48.449 7.293 15.036 1.00 44.81 C
ATOM 12 O2' G B 3 48.666 7.974 16.255 1.00 58.02 O
ATOM 13 C1' G B 3 47.343 6.255 15.217 1.00 48.26 C
ATOM 14 N9 G B 3 47.466 5.116 14.309 1.00 33.71 N
ATOM 15 C8 G B 3 46.670 4.821 13.225 1.00 30.34 C
ATOM 16 N7 G B 3 47.015 3.710 12.622 1.00 49.30 N
ATOM 17 C5 G B 3 48.107 3.247 13.348 1.00 21.18 C
ATOM 18 C6 G B 3 48.912 2.077 13.174 1.00 32.17 C
ATOM 19 O6 G B 3 48.813 1.182 12.323 1.00 44.40 O
ATOM 20 N1 G B 3 49.921 2.007 14.124 1.00 26.79 N
ATOM 21 C2 G B 3 50.133 2.932 15.116 1.00 32.74 C
ATOM 22 N2 G B 3 51.165 2.691 15.929 1.00 29.27 N
ATOM 23 N3 G B 3 49.392 4.016 15.298 1.00 18.43 N
ATOM 24 C4 G B 3 48.405 4.109 14.385 1.00 33.57 C
ATOM 25 P U B 4 49.679 9.737 12.992 1.00 47.01 P
ATOM 26 OP1 U B 4 50.194 11.089 13.307 1.00 49.63 O
ATOM 27 OP2 U B 4 49.245 9.427 11.606 1.00 35.19 O
ATOM 28 O5' U B 4 50.754 8.647 13.446 1.00 39.15 O
TER
ATOM 2 P G A 20 54.087 -3.111 20.052 1.00 75.60 P
ATOM 3 OP1 G A 20 54.688 -3.519 21.349 1.00 79.80 O
ATOM 4 OP2 G A 20 53.386 -4.123 19.222 1.00 83.86 O
ATOM 5 O5' G A 20 53.068 -1.909 20.309 1.00 54.88 O
ATOM 6 C5' G A 20 53.427 -0.820 21.152 1.00 54.93 C
ATOM 7 C4' G A 20 52.365 0.257 21.126 1.00 54.03 C
ATOM 8 O4' G A 20 52.183 0.738 19.767 1.00 62.10 O
ATOM 9 C3' G A 20 50.959 -0.137 21.540 1.00 49.89 C
ATOM 10 O3' G A 20 50.815 -0.161 22.950 1.00 52.34 O
ATOM 11 C2' G A 20 50.138 0.996 20.940 1.00 52.73 C
ATOM 12 O2' G A 20 50.214 2.179 21.705 1.00 45.77 O
ATOM 13 C1' G A 20 50.855 1.214 19.609 1.00 45.64 C
ATOM 14 N9 G A 20 50.217 0.498 18.505 1.00 42.95 N
ATOM 15 C8 G A 20 50.614 -0.684 17.923 1.00 41.15 C
ATOM 16 N7 G A 20 49.833 -1.063 16.944 1.00 40.52 N
ATOM 17 C5 G A 20 48.859 -0.072 16.880 1.00 34.28 C
ATOM 18 C6 G A 20 47.741 0.066 16.017 1.00 30.62 C
ATOM 19 O6 G A 20 47.367 -0.687 15.106 1.00 27.91 O
ATOM 20 N1 G A 20 47.023 1.222 16.298 1.00 27.36 N
ATOM 21 C2 G A 20 47.336 2.130 17.281 1.00 33.41 C
ATOM 22 N2 G A 20 46.526 3.195 17.397 1.00 29.03 N
ATOM 23 N3 G A 20 48.368 2.010 18.092 1.00 25.77 N
ATOM 24 C4 G A 20 49.081 0.895 17.838 1.00 33.36 C
ATOM 25 P C A 21 49.666 -1.064 23.611 1.00 48.97 P
ATOM 26 OP1 C A 21 49.874 -1.074 25.082 1.00 68.52 O
ATOM 27 OP2 C A 21 49.608 -2.352 22.862 1.00 32.26 O
ATOM 28 O5' C A 21 48.333 -0.247 23.336 1.00 44.46 O
TER
ATOM 1 O3' C B 2 43.043 7.327 11.929 1.00 41.08 O
ATOM 2 P G B 3 44.412 7.625 11.159 1.00 48.70 P
ATOM 3 OP1 G B 3 44.263 8.968 10.546 1.00 42.56 O
ATOM 4 OP2 G B 3 44.752 6.442 10.311 1.00 24.60 O
ATOM 5 O5' G B 3 45.504 7.691 12.314 1.00 43.73 O
ATOM 6 C5' G B 3 45.372 8.599 13.399 1.00 42.89 C
ATOM 7 C4' G B 3 46.377 8.264 14.470 1.00 38.59 C
ATOM 8 O4' G B 3 46.116 6.915 14.945 1.00 43.78 O
ATOM 9 C3' G B 3 47.818 8.200 13.995 1.00 43.09 C
ATOM 10 O3' G B 3 48.432 9.478 13.975 1.00 50.38 O
ATOM 11 C2' G B 3 48.449 7.293 15.036 1.00 44.81 C
ATOM 12 O2' G B 3 48.666 7.974 16.255 1.00 58.02 O
ATOM 13 C1' G B 3 47.343 6.255 15.217 1.00 48.26 C
ATOM 14 N9 G B 3 47.466 5.116 14.309 1.00 33.71 N
ATOM 15 C8 G B 3 46.670 4.821 13.225 1.00 30.34 C
ATOM 16 N7 G B 3 47.015 3.710 12.622 1.00 49.30 N
ATOM 17 C5 G B 3 48.107 3.247 13.348 1.00 21.18 C
ATOM 18 C6 G B 3 48.912 2.077 13.174 1.00 32.17 C
ATOM 19 O6 G B 3 48.813 1.182 12.323 1.00 44.40 O
ATOM 20 N1 G B 3 49.921 2.007 14.124 1.00 26.79 N
ATOM 21 C2 G B 3 50.133 2.932 15.116 1.00 32.74 C
ATOM 22 N2 G B 3 51.165 2.691 15.929 1.00 29.27 N
ATOM 23 N3 G B 3 49.392 4.016 15.298 1.00 18.43 N
ATOM 24 C4 G B 3 48.405 4.109 14.385 1.00 33.57 C
ATOM 25 P U B 4 49.679 9.737 12.992 1.00 47.01 P
ATOM 26 OP1 U B 4 50.194 11.089 13.307 1.00 49.63 O
ATOM 27 OP2 U B 4 49.245 9.427 11.606 1.00 35.19 O
ATOM 28 O5' U B 4 50.754 8.647 13.446 1.00 39.15 O
TER
Atoms:
OP1: (54.688,-3.519,21.349)
OP2: (53.386,-4.123,19.222)
C3': (50.959,-0.137,21.540)
C1': (50.855,1.214,19.609)
C5': (53.427,-0.820,21.152)
O6: (47.367,-0.687,15.106)
O4': (52.183,0.738,19.767)
C8: (50.614,-0.684,17.923)
C2: (47.336,2.130,17.281)
C6: (47.741,0.066,16.017)
C5: (48.859,-0.072,16.880)
C4: (49.081,0.895,17.838)
P: (54.087,-3.111,20.052)
C4': (52.365,0.257,21.126)
C2': (50.138,0.996,20.940)
O2': (50.214,2.179,21.705)
N1: (47.023,1.222,16.298)
N2: (46.526,3.195,17.397)
N3: (48.368,2.010,18.092)
N7: (49.833,-1.063,16.944)
N9: (50.217,0.498,18.505)
O5': (53.068,-1.909,20.309)
O3': (50.815,-0.161,22.950)
OP2: (53.386,-4.123,19.222)
C3': (50.959,-0.137,21.540)
C1': (50.855,1.214,19.609)
C5': (53.427,-0.820,21.152)
O6: (47.367,-0.687,15.106)
O4': (52.183,0.738,19.767)
C8: (50.614,-0.684,17.923)
C2: (47.336,2.130,17.281)
C6: (47.741,0.066,16.017)
C5: (48.859,-0.072,16.880)
C4: (49.081,0.895,17.838)
P: (54.087,-3.111,20.052)
C4': (52.365,0.257,21.126)
C2': (50.138,0.996,20.940)
O2': (50.214,2.179,21.705)
N1: (47.023,1.222,16.298)
N2: (46.526,3.195,17.397)
N3: (48.368,2.010,18.092)
N7: (49.833,-1.063,16.944)
N9: (50.217,0.498,18.505)
O5': (53.068,-1.909,20.309)
O3': (50.815,-0.161,22.950)
OP1: (44.263,8.968,10.546)
OP2: (44.752,6.442,10.311)
C3': (47.818,8.200,13.995)
C1': (47.343,6.255,15.217)
C5': (45.372,8.599,13.399)
O6: (48.813,1.182,12.323)
O4': (46.116,6.915,14.945)
C8: (46.670,4.821,13.225)
C2: (50.133,2.932,15.116)
C6: (48.912,2.077,13.174)
C5: (48.107,3.247,13.348)
C4: (48.405,4.109,14.385)
P: (44.412,7.625,11.159)
C4': (46.377,8.264,14.470)
C2': (48.449,7.293,15.036)
O2': (48.666,7.974,16.255)
N1: (49.921,2.007,14.124)
N2: (51.165,2.691,15.929)
N3: (49.392,4.016,15.298)
N7: (47.015,3.710,12.622)
N9: (47.466,5.116,14.309)
O5': (45.504,7.691,12.314)
O3': (48.432,9.478,13.975)
OP2: (44.752,6.442,10.311)
C3': (47.818,8.200,13.995)
C1': (47.343,6.255,15.217)
C5': (45.372,8.599,13.399)
O6: (48.813,1.182,12.323)
O4': (46.116,6.915,14.945)
C8: (46.670,4.821,13.225)
C2: (50.133,2.932,15.116)
C6: (48.912,2.077,13.174)
C5: (48.107,3.247,13.348)
C4: (48.405,4.109,14.385)
P: (44.412,7.625,11.159)
C4': (46.377,8.264,14.470)
C2': (48.449,7.293,15.036)
O2': (48.666,7.974,16.255)
N1: (49.921,2.007,14.124)
N2: (51.165,2.691,15.929)
N3: (49.392,4.016,15.298)
N7: (47.015,3.710,12.622)
N9: (47.466,5.116,14.309)
O5': (45.504,7.691,12.314)
O3': (48.432,9.478,13.975)
Image (generated by PyMOL):