ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3ADB:D53:D57

Extra

PDB:
ATOM 1 O3' C A 52 -68.636 221.974 93.397 1.00 69.10 O
ATOM 2 P G A 53 -68.726 222.923 92.107 1.00 76.96 P
ATOM 3 OP1 G A 53 -69.531 224.108 92.505 1.00 79.19 O
ATOM 4 OP2 G A 53 -69.154 222.093 90.948 1.00 76.26 O
ATOM 5 O5' G A 53 -67.224 223.389 91.863 1.00 76.52 O
ATOM 6 C5' G A 53 -66.544 224.185 92.824 1.00 82.46 C
ATOM 7 C4' G A 53 -65.131 224.453 92.369 1.00 87.90 C
ATOM 8 O4' G A 53 -64.448 223.189 92.184 1.00 84.09 O
ATOM 9 C3' G A 53 -64.985 225.143 91.022 1.00 93.44 C
ATOM 10 O3' G A 53 -65.089 226.560 91.163 1.00102.37 O
ATOM 11 C2' G A 53 -63.574 224.743 90.603 1.00 90.22 C
ATOM 12 O2' G A 53 -62.584 225.564 91.191 1.00 91.89 O
ATOM 13 C1' G A 53 -63.468 223.325 91.172 1.00 84.70 C
ATOM 14 N9 G A 53 -63.647 222.252 90.200 1.00 80.19 N
ATOM 15 C8 G A 53 -64.711 221.389 90.098 1.00 80.32 C
ATOM 16 N7 G A 53 -64.561 220.497 89.156 1.00 79.25 N
ATOM 17 C5 G A 53 -63.329 220.796 88.594 1.00 79.72 C
ATOM 18 C6 G A 53 -62.623 220.168 87.531 1.00 80.94 C
ATOM 19 O6 G A 53 -62.955 219.182 86.858 1.00 77.45 O
ATOM 20 N1 G A 53 -61.410 220.803 87.282 1.00 83.83 N
ATOM 21 C2 G A 53 -60.931 221.900 87.969 1.00 85.10 C
ATOM 22 N2 G A 53 -59.733 222.374 87.581 1.00 85.75 N
ATOM 23 N3 G A 53 -61.577 222.486 88.963 1.00 81.92 N
ATOM 24 C4 G A 53 -62.758 221.887 89.220 1.00 79.90 C
ATOM 25 P A A 54 -65.524 227.457 89.902 1.00108.19 P
ATOM 26 OP1 A A 54 -64.715 228.703 89.912 1.00108.13 O
ATOM 27 OP2 A A 54 -67.010 227.538 89.914 1.00106.59 O
ATOM 28 O5' A A 54 -65.080 226.582 88.649 1.00108.70 O
TER

ATOM 1 O3' U B 56 -52.242 222.050 86.298 1.00104.54 O
ATOM 2 P G B 57 -52.980 220.746 86.886 1.00100.88 P
ATOM 3 OP1 G B 57 -51.932 219.799 87.322 1.00 97.06 O
ATOM 4 OP2 G B 57 -53.984 220.302 85.979 1.00101.10 O
ATOM 5 O5' G B 57 -53.752 221.284 88.158 1.00100.49 O
ATOM 6 C5' G B 57 -53.156 221.169 89.483 1.00100.24 C
ATOM 7 C4' G B 57 -54.002 221.862 90.533 1.00 99.16 C
ATOM 8 O4' G B 57 -55.133 222.532 89.910 1.00100.51 O
ATOM 9 C3' G B 57 -54.595 220.944 91.600 1.00 97.43 C
ATOM 10 O3' G B 57 -53.707 220.737 92.698 1.00 91.24 O
ATOM 11 C2' G B 57 -55.803 221.744 92.046 1.00100.11 C
ATOM 12 O2' G B 57 -55.514 222.773 92.976 1.00100.50 O
ATOM 13 C1' G B 57 -56.272 222.338 90.713 1.00101.27 C
ATOM 14 N9 G B 57 -57.147 221.425 89.993 1.00102.68 N
ATOM 15 C8 G B 57 -56.914 220.850 88.765 1.00105.01 C
ATOM 16 N7 G B 57 -57.867 220.034 88.394 1.00104.80 N
ATOM 17 C5 G B 57 -58.790 220.080 89.434 1.00100.69 C
ATOM 18 C6 G B 57 -60.047 219.397 89.606 1.00 97.61 C
ATOM 19 O6 G B 57 -60.615 218.588 88.851 1.00 95.07 O
ATOM 20 N1 G B 57 -60.652 219.747 90.805 1.00 94.07 N
ATOM 21 C2 G B 57 -60.136 220.627 91.720 1.00 93.61 C
ATOM 22 N2 G B 57 -60.871 220.835 92.808 1.00 94.28 N
ATOM 23 N3 G B 57 -58.982 221.262 91.581 1.00 96.84 N
ATOM 24 C4 G B 57 -58.365 220.944 90.423 1.00100.71 C
ATOM 25 P G B 58 -53.432 219.243 93.242 1.00 88.01 P
ATOM 26 OP1 G B 58 -52.157 219.297 94.003 1.00 88.87 O
ATOM 27 OP2 G B 58 -53.542 218.325 92.074 1.00 84.66 O
ATOM 28 O5' G B 58 -54.625 218.945 94.264 1.00 86.19 O
TER

Atoms:
OP1: (-69.531,224.108,92.505)
OP2: (-69.154,222.093,90.948)
C3': (-64.985,225.143,91.022)
C1': (-63.468,223.325,91.172)
C5': (-66.544,224.185,92.824)
O6: (-62.955,219.182,86.858)
O4': (-64.448,223.189,92.184)
C8: (-64.711,221.389,90.098)
C2: (-60.931,221.900,87.969)
C6: (-62.623,220.168,87.531)
C5: (-63.329,220.796,88.594)
C4: (-62.758,221.887,89.220)
P: (-68.726,222.923,92.107)
C4': (-65.131,224.453,92.369)
C2': (-63.574,224.743,90.603)
O2': (-62.584,225.564,91.191)
N1: (-61.410,220.803,87.282)
N2: (-59.733,222.374,87.581)
N3: (-61.577,222.486,88.963)
N7: (-64.561,220.497,89.156)
N9: (-63.647,222.252,90.200)
O5': (-67.224,223.389,91.863)
O3': (-65.089,226.560,91.163)
OP1: (-51.932,219.799,87.322)
OP2: (-53.984,220.302,85.979)
C3': (-54.595,220.944,91.600)
C1': (-56.272,222.338,90.713)
C5': (-53.156,221.169,89.483)
O6: (-60.615,218.588,88.851)
O4': (-55.133,222.532,89.910)
C8: (-56.914,220.850,88.765)
C2: (-60.136,220.627,91.720)
C6: (-60.047,219.397,89.606)
C5: (-58.790,220.080,89.434)
C4: (-58.365,220.944,90.423)
P: (-52.980,220.746,86.886)
C4': (-54.002,221.862,90.533)
C2': (-55.803,221.744,92.046)
O2': (-55.514,222.773,92.976)
N1: (-60.652,219.747,90.805)
N2: (-60.871,220.835,92.808)
N3: (-58.982,221.262,91.581)
N7: (-57.867,220.034,88.394)
N9: (-57.147,221.425,89.993)
O5': (-53.752,221.284,88.158)
O3': (-53.707,220.737,92.698)
Image (generated by PyMOL):
PyMOL image
show in jmol