Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J8G:B1:D1
Extra
PDB:
ATOM 1 P G A 1 5.857 35.106 12.042 1.00 4.62 P
ATOM 2 OP1 G A 1 5.229 34.036 12.819 1.00 5.58 O
ATOM 3 OP2 G A 1 4.983 36.144 11.445 1.00 6.93 O
ATOM 4 O5' G A 1 6.975 35.874 12.930 1.00 4.42 O
ATOM 5 C5' G A 1 7.562 35.252 14.078 1.00 3.75 C
ATOM 6 C4' G A 1 8.316 33.993 13.778 1.00 3.02 C
ATOM 7 O4' G A 1 9.447 34.279 12.918 1.00 3.09 O
ATOM 8 C3' G A 1 8.950 33.382 15.013 1.00 2.83 C
ATOM 9 O3' G A 1 7.969 32.642 15.735 1.00 3.17 O
ATOM 10 C2' G A 1 10.065 32.530 14.404 1.00 2.79 C
ATOM 11 O2' G A 1 9.493 31.359 13.863 1.00 3.45 O
ATOM 12 C1' G A 1 10.544 33.452 13.278 1.00 2.76 C
ATOM 13 N9 G A 1 11.637 34.333 13.714 1.00 2.54 N
ATOM 14 C8 G A 1 11.653 35.708 13.748 1.00 2.73 C
ATOM 15 N7 G A 1 12.860 36.192 13.930 1.00 2.53 N
ATOM 16 C5 G A 1 13.670 35.089 14.000 1.00 2.26 C
ATOM 17 C6 G A 1 15.074 34.973 14.102 1.00 2.09 C
ATOM 18 O6 G A 1 15.907 35.902 14.229 1.00 2.15 O
ATOM 19 N1 G A 1 15.505 33.647 14.053 1.00 2.16 N
ATOM 20 C2 G A 1 14.668 32.543 14.015 1.00 2.25 C
ATOM 21 N2 G A 1 15.240 31.346 14.098 1.00 2.56 N
ATOM 22 N3 G A 1 13.349 32.640 13.916 1.00 2.32 N
ATOM 23 C4 G A 1 12.928 33.916 13.865 1.00 2.37 C
ATOM 24 P G A 2 8.077 32.443 17.305 1.00 2.84 P
ATOM 25 OP1 G A 2 6.770 31.844 17.689 1.00 3.75 O
ATOM 26 OP2 G A 2 8.566 33.692 17.962 1.00 3.62 O
ATOM 27 O5' G A 2 9.268 31.414 17.511 1.00 3.17 O
TER
ATOM 1 P G B 1 13.240 25.060 12.598 1.00 3.50 P
ATOM 2 OP1 G B 1 12.006 24.746 11.833 1.00 4.32 O
ATOM 3 OP2 G B 1 14.070 23.962 13.128 1.00 4.19 O
ATOM 4 O5' G B 1 14.212 25.978 11.731 1.00 3.92 O
ATOM 5 C5' G B 1 13.787 26.648 10.540 1.00 3.98 C
ATOM 6 C4' G B 1 12.778 27.725 10.802 1.00 3.63 C
ATOM 7 O4' G B 1 13.344 28.708 11.713 1.00 3.30 O
ATOM 8 C3' G B 1 12.408 28.550 9.573 1.00 3.69 C
ATOM 9 O3' G B 1 11.442 27.843 8.796 1.00 4.69 O
ATOM 10 C2' G B 1 11.918 29.841 10.191 1.00 3.51 C
ATOM 11 O2' G B 1 10.627 29.629 10.723 1.00 4.42 O
ATOM 12 C1' G B 1 12.939 30.008 11.332 1.00 3.09 C
ATOM 13 N9 G B 1 14.129 30.736 10.907 1.00 2.81 N
ATOM 14 C8 G B 1 15.437 30.278 10.876 1.00 2.99 C
ATOM 15 N7 G B 1 16.307 31.246 10.686 1.00 2.89 N
ATOM 16 C5 G B 1 15.533 32.394 10.620 1.00 2.50 C
ATOM 17 C6 G B 1 15.924 33.751 10.499 1.00 2.31 C
ATOM 18 O6 G B 1 17.083 34.205 10.383 1.00 2.49 O
ATOM 19 N1 G B 1 14.829 34.612 10.557 1.00 2.37 N
ATOM 20 C2 G B 1 13.508 34.201 10.598 1.00 2.47 C
ATOM 21 N2 G B 1 12.582 35.169 10.523 1.00 2.87 N
ATOM 22 N3 G B 1 13.138 32.931 10.711 1.00 2.73 N
ATOM 23 C4 G B 1 14.184 32.101 10.746 1.00 2.56 C
ATOM 24 P G B 2 11.321 28.099 7.219 1.00 4.59 P
ATOM 25 OP1 G B 2 10.332 27.082 6.763 1.00 6.79 O
ATOM 26 OP2 G B 2 12.661 28.194 6.609 1.00 5.23 O
ATOM 27 O5' G B 2 10.711 29.555 7.086 1.00 4.52 O
TER
ATOM 2 OP1 G A 1 5.229 34.036 12.819 1.00 5.58 O
ATOM 3 OP2 G A 1 4.983 36.144 11.445 1.00 6.93 O
ATOM 4 O5' G A 1 6.975 35.874 12.930 1.00 4.42 O
ATOM 5 C5' G A 1 7.562 35.252 14.078 1.00 3.75 C
ATOM 6 C4' G A 1 8.316 33.993 13.778 1.00 3.02 C
ATOM 7 O4' G A 1 9.447 34.279 12.918 1.00 3.09 O
ATOM 8 C3' G A 1 8.950 33.382 15.013 1.00 2.83 C
ATOM 9 O3' G A 1 7.969 32.642 15.735 1.00 3.17 O
ATOM 10 C2' G A 1 10.065 32.530 14.404 1.00 2.79 C
ATOM 11 O2' G A 1 9.493 31.359 13.863 1.00 3.45 O
ATOM 12 C1' G A 1 10.544 33.452 13.278 1.00 2.76 C
ATOM 13 N9 G A 1 11.637 34.333 13.714 1.00 2.54 N
ATOM 14 C8 G A 1 11.653 35.708 13.748 1.00 2.73 C
ATOM 15 N7 G A 1 12.860 36.192 13.930 1.00 2.53 N
ATOM 16 C5 G A 1 13.670 35.089 14.000 1.00 2.26 C
ATOM 17 C6 G A 1 15.074 34.973 14.102 1.00 2.09 C
ATOM 18 O6 G A 1 15.907 35.902 14.229 1.00 2.15 O
ATOM 19 N1 G A 1 15.505 33.647 14.053 1.00 2.16 N
ATOM 20 C2 G A 1 14.668 32.543 14.015 1.00 2.25 C
ATOM 21 N2 G A 1 15.240 31.346 14.098 1.00 2.56 N
ATOM 22 N3 G A 1 13.349 32.640 13.916 1.00 2.32 N
ATOM 23 C4 G A 1 12.928 33.916 13.865 1.00 2.37 C
ATOM 24 P G A 2 8.077 32.443 17.305 1.00 2.84 P
ATOM 25 OP1 G A 2 6.770 31.844 17.689 1.00 3.75 O
ATOM 26 OP2 G A 2 8.566 33.692 17.962 1.00 3.62 O
ATOM 27 O5' G A 2 9.268 31.414 17.511 1.00 3.17 O
TER
ATOM 1 P G B 1 13.240 25.060 12.598 1.00 3.50 P
ATOM 2 OP1 G B 1 12.006 24.746 11.833 1.00 4.32 O
ATOM 3 OP2 G B 1 14.070 23.962 13.128 1.00 4.19 O
ATOM 4 O5' G B 1 14.212 25.978 11.731 1.00 3.92 O
ATOM 5 C5' G B 1 13.787 26.648 10.540 1.00 3.98 C
ATOM 6 C4' G B 1 12.778 27.725 10.802 1.00 3.63 C
ATOM 7 O4' G B 1 13.344 28.708 11.713 1.00 3.30 O
ATOM 8 C3' G B 1 12.408 28.550 9.573 1.00 3.69 C
ATOM 9 O3' G B 1 11.442 27.843 8.796 1.00 4.69 O
ATOM 10 C2' G B 1 11.918 29.841 10.191 1.00 3.51 C
ATOM 11 O2' G B 1 10.627 29.629 10.723 1.00 4.42 O
ATOM 12 C1' G B 1 12.939 30.008 11.332 1.00 3.09 C
ATOM 13 N9 G B 1 14.129 30.736 10.907 1.00 2.81 N
ATOM 14 C8 G B 1 15.437 30.278 10.876 1.00 2.99 C
ATOM 15 N7 G B 1 16.307 31.246 10.686 1.00 2.89 N
ATOM 16 C5 G B 1 15.533 32.394 10.620 1.00 2.50 C
ATOM 17 C6 G B 1 15.924 33.751 10.499 1.00 2.31 C
ATOM 18 O6 G B 1 17.083 34.205 10.383 1.00 2.49 O
ATOM 19 N1 G B 1 14.829 34.612 10.557 1.00 2.37 N
ATOM 20 C2 G B 1 13.508 34.201 10.598 1.00 2.47 C
ATOM 21 N2 G B 1 12.582 35.169 10.523 1.00 2.87 N
ATOM 22 N3 G B 1 13.138 32.931 10.711 1.00 2.73 N
ATOM 23 C4 G B 1 14.184 32.101 10.746 1.00 2.56 C
ATOM 24 P G B 2 11.321 28.099 7.219 1.00 4.59 P
ATOM 25 OP1 G B 2 10.332 27.082 6.763 1.00 6.79 O
ATOM 26 OP2 G B 2 12.661 28.194 6.609 1.00 5.23 O
ATOM 27 O5' G B 2 10.711 29.555 7.086 1.00 4.52 O
TER
Atoms:
OP1: (5.229,34.036,12.819)
OP2: (4.983,36.144,11.445)
C3': (8.950,33.382,15.013)
C1': (10.544,33.452,13.278)
C5': (7.562,35.252,14.078)
O6: (15.907,35.902,14.229)
O4': (9.447,34.279,12.918)
C8: (11.653,35.708,13.748)
C2: (14.668,32.543,14.015)
C6: (15.074,34.973,14.102)
C5: (13.670,35.089,14.000)
C4: (12.928,33.916,13.865)
P: (5.857,35.106,12.042)
C4': (8.316,33.993,13.778)
C2': (10.065,32.530,14.404)
O2': (9.493,31.359,13.863)
N1: (15.505,33.647,14.053)
N2: (15.240,31.346,14.098)
N3: (13.349,32.640,13.916)
N7: (12.860,36.192,13.930)
N9: (11.637,34.333,13.714)
O5': (6.975,35.874,12.930)
O3': (7.969,32.642,15.735)
OP2: (4.983,36.144,11.445)
C3': (8.950,33.382,15.013)
C1': (10.544,33.452,13.278)
C5': (7.562,35.252,14.078)
O6: (15.907,35.902,14.229)
O4': (9.447,34.279,12.918)
C8: (11.653,35.708,13.748)
C2: (14.668,32.543,14.015)
C6: (15.074,34.973,14.102)
C5: (13.670,35.089,14.000)
C4: (12.928,33.916,13.865)
P: (5.857,35.106,12.042)
C4': (8.316,33.993,13.778)
C2': (10.065,32.530,14.404)
O2': (9.493,31.359,13.863)
N1: (15.505,33.647,14.053)
N2: (15.240,31.346,14.098)
N3: (13.349,32.640,13.916)
N7: (12.860,36.192,13.930)
N9: (11.637,34.333,13.714)
O5': (6.975,35.874,12.930)
O3': (7.969,32.642,15.735)
OP1: (12.006,24.746,11.833)
OP2: (14.070,23.962,13.128)
C3': (12.408,28.550,9.573)
C1': (12.939,30.008,11.332)
C5': (13.787,26.648,10.540)
O6: (17.083,34.205,10.383)
O4': (13.344,28.708,11.713)
C8: (15.437,30.278,10.876)
C2: (13.508,34.201,10.598)
C6: (15.924,33.751,10.499)
C5: (15.533,32.394,10.620)
C4: (14.184,32.101,10.746)
P: (13.240,25.060,12.598)
C4': (12.778,27.725,10.802)
C2': (11.918,29.841,10.191)
O2': (10.627,29.629,10.723)
N1: (14.829,34.612,10.557)
N2: (12.582,35.169,10.523)
N3: (13.138,32.931,10.711)
N7: (16.307,31.246,10.686)
N9: (14.129,30.736,10.907)
O5': (14.212,25.978,11.731)
O3': (11.442,27.843,8.796)
OP2: (14.070,23.962,13.128)
C3': (12.408,28.550,9.573)
C1': (12.939,30.008,11.332)
C5': (13.787,26.648,10.540)
O6: (17.083,34.205,10.383)
O4': (13.344,28.708,11.713)
C8: (15.437,30.278,10.876)
C2: (13.508,34.201,10.598)
C6: (15.924,33.751,10.499)
C5: (15.533,32.394,10.620)
C4: (14.184,32.101,10.746)
P: (13.240,25.060,12.598)
C4': (12.778,27.725,10.802)
C2': (11.918,29.841,10.191)
O2': (10.627,29.629,10.723)
N1: (14.829,34.612,10.557)
N2: (12.582,35.169,10.523)
N3: (13.138,32.931,10.711)
N7: (16.307,31.246,10.686)
N9: (14.129,30.736,10.907)
O5': (14.212,25.978,11.731)
O3': (11.442,27.843,8.796)
Image (generated by PyMOL):