Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1E:A5:B3
Extra
PDB:
ATOM 1 O3' C A 4 -19.054 3.706 8.070 0.50 11.65 O
ATOM 2 P G A 5 -19.350 3.639 9.655 0.50 11.02 P
ATOM 3 OP1 G A 5 -20.811 3.677 9.817 0.50 12.03 O
ATOM 4 OP2 G A 5 -18.534 4.635 10.380 0.50 12.34 O
ATOM 5 O5' G A 5 -18.770 2.208 10.088 0.50 11.32 O
ATOM 6 C5' G A 5 -19.423 1.066 9.564 0.50 10.37 C
ATOM 7 C4' G A 5 -18.547 -0.172 9.601 0.50 10.10 C
ATOM 8 O4' G A 5 -17.347 0.079 8.838 0.50 8.98 O
ATOM 9 C3' G A 5 -17.970 -0.639 10.920 0.50 9.28 C
ATOM 10 O3' G A 5 -18.968 -1.340 11.657 0.50 9.68 O
ATOM 11 C2' G A 5 -16.892 -1.588 10.397 0.50 8.84 C
ATOM 12 O2' G A 5 -17.486 -2.729 9.809 0.50 9.41 O
ATOM 13 C1' G A 5 -16.276 -0.698 9.335 0.50 9.27 C
ATOM 14 N9 G A 5 -15.238 0.160 9.897 0.50 8.45 N
ATOM 15 C8 G A 5 -15.285 1.497 10.198 0.50 9.90 C
ATOM 16 N7 G A 5 -14.156 1.941 10.692 0.50 9.49 N
ATOM 17 C5 G A 5 -13.301 0.842 10.707 0.50 10.06 C
ATOM 18 C6 G A 5 -11.948 0.694 11.132 0.50 9.60 C
ATOM 19 O6 G A 5 -11.193 1.559 11.606 0.50 10.47 O
ATOM 20 N1 G A 5 -11.480 -0.611 10.954 0.50 10.10 N
ATOM 21 C2 G A 5 -12.250 -1.645 10.451 0.50 8.80 C
ATOM 22 N2 G A 5 -11.674 -2.848 10.373 0.50 9.87 N
ATOM 23 N3 G A 5 -13.508 -1.516 10.066 0.50 9.00 N
ATOM 24 C4 G A 5 -13.971 -0.256 10.208 0.50 8.54 C
ATOM 25 P G A 6 -18.731 -1.755 13.176 1.00 11.49 P
ATOM 26 OP1 G A 6 -19.998 -2.382 13.588 1.00 14.40 O
ATOM 27 OP2 G A 6 -18.167 -0.663 14.011 1.00 13.46 O
ATOM 28 O5' G A 6 -17.571 -2.843 13.169 1.00 12.06 O
TER
ATOM 1 P G B 3 -4.530 -6.240 7.172 1.00 9.84 P
ATOM 2 OP1 G B 3 -3.822 -7.306 6.382 1.00 10.40 O
ATOM 3 OP2 G B 3 -4.098 -4.837 7.055 1.00 10.75 O
ATOM 4 O5' G B 3 -6.067 -6.240 6.847 1.00 9.09 O
ATOM 5 C5' G B 3 -6.765 -7.484 6.736 1.00 9.25 C
ATOM 6 C4' G B 3 -8.213 -7.224 6.436 1.00 8.50 C
ATOM 7 O4' G B 3 -8.840 -6.518 7.539 1.00 8.90 O
ATOM 8 C3' G B 3 -8.464 -6.294 5.274 1.00 7.84 C
ATOM 9 O3' G B 3 -8.246 -6.954 4.049 1.00 8.36 O
ATOM 10 C2' G B 3 -9.899 -5.874 5.541 1.00 8.28 C
ATOM 11 O2' G B 3 -10.820 -6.917 5.273 1.00 8.74 O
ATOM 12 C1' G B 3 -9.843 -5.645 7.023 1.00 8.50 C
ATOM 13 N9 G B 3 -9.458 -4.265 7.373 1.00 8.37 N
ATOM 14 C8 G B 3 -8.258 -3.804 7.846 1.00 9.09 C
ATOM 15 N7 G B 3 -8.271 -2.516 8.057 1.00 8.79 N
ATOM 16 C5 G B 3 -9.534 -2.101 7.701 1.00 8.49 C
ATOM 17 C6 G B 3 -10.140 -0.819 7.754 1.00 8.47 C
ATOM 18 O6 G B 3 -9.643 0.246 8.181 1.00 8.87 O
ATOM 19 N1 G B 3 -11.437 -0.829 7.268 1.00 8.25 N
ATOM 20 C2 G B 3 -12.090 -1.955 6.806 1.00 7.80 C
ATOM 21 N2 G B 3 -13.311 -1.765 6.312 1.00 8.77 N
ATOM 22 N3 G B 3 -11.543 -3.167 6.826 1.00 7.92 N
ATOM 23 C4 G B 3 -10.278 -3.167 7.281 1.00 7.80 C
ATOM 24 P C B 4 -7.725 -6.133 2.783 1.00 8.63 P
ATOM 25 OP1 C B 4 -7.545 -7.149 1.689 1.00 9.92 O
ATOM 26 OP2 C B 4 -6.594 -5.254 3.150 1.00 9.49 O
ATOM 27 O5' C B 4 -8.927 -5.174 2.440 1.00 8.15 O
TER
ATOM 2 P G A 5 -19.350 3.639 9.655 0.50 11.02 P
ATOM 3 OP1 G A 5 -20.811 3.677 9.817 0.50 12.03 O
ATOM 4 OP2 G A 5 -18.534 4.635 10.380 0.50 12.34 O
ATOM 5 O5' G A 5 -18.770 2.208 10.088 0.50 11.32 O
ATOM 6 C5' G A 5 -19.423 1.066 9.564 0.50 10.37 C
ATOM 7 C4' G A 5 -18.547 -0.172 9.601 0.50 10.10 C
ATOM 8 O4' G A 5 -17.347 0.079 8.838 0.50 8.98 O
ATOM 9 C3' G A 5 -17.970 -0.639 10.920 0.50 9.28 C
ATOM 10 O3' G A 5 -18.968 -1.340 11.657 0.50 9.68 O
ATOM 11 C2' G A 5 -16.892 -1.588 10.397 0.50 8.84 C
ATOM 12 O2' G A 5 -17.486 -2.729 9.809 0.50 9.41 O
ATOM 13 C1' G A 5 -16.276 -0.698 9.335 0.50 9.27 C
ATOM 14 N9 G A 5 -15.238 0.160 9.897 0.50 8.45 N
ATOM 15 C8 G A 5 -15.285 1.497 10.198 0.50 9.90 C
ATOM 16 N7 G A 5 -14.156 1.941 10.692 0.50 9.49 N
ATOM 17 C5 G A 5 -13.301 0.842 10.707 0.50 10.06 C
ATOM 18 C6 G A 5 -11.948 0.694 11.132 0.50 9.60 C
ATOM 19 O6 G A 5 -11.193 1.559 11.606 0.50 10.47 O
ATOM 20 N1 G A 5 -11.480 -0.611 10.954 0.50 10.10 N
ATOM 21 C2 G A 5 -12.250 -1.645 10.451 0.50 8.80 C
ATOM 22 N2 G A 5 -11.674 -2.848 10.373 0.50 9.87 N
ATOM 23 N3 G A 5 -13.508 -1.516 10.066 0.50 9.00 N
ATOM 24 C4 G A 5 -13.971 -0.256 10.208 0.50 8.54 C
ATOM 25 P G A 6 -18.731 -1.755 13.176 1.00 11.49 P
ATOM 26 OP1 G A 6 -19.998 -2.382 13.588 1.00 14.40 O
ATOM 27 OP2 G A 6 -18.167 -0.663 14.011 1.00 13.46 O
ATOM 28 O5' G A 6 -17.571 -2.843 13.169 1.00 12.06 O
TER
ATOM 1 P G B 3 -4.530 -6.240 7.172 1.00 9.84 P
ATOM 2 OP1 G B 3 -3.822 -7.306 6.382 1.00 10.40 O
ATOM 3 OP2 G B 3 -4.098 -4.837 7.055 1.00 10.75 O
ATOM 4 O5' G B 3 -6.067 -6.240 6.847 1.00 9.09 O
ATOM 5 C5' G B 3 -6.765 -7.484 6.736 1.00 9.25 C
ATOM 6 C4' G B 3 -8.213 -7.224 6.436 1.00 8.50 C
ATOM 7 O4' G B 3 -8.840 -6.518 7.539 1.00 8.90 O
ATOM 8 C3' G B 3 -8.464 -6.294 5.274 1.00 7.84 C
ATOM 9 O3' G B 3 -8.246 -6.954 4.049 1.00 8.36 O
ATOM 10 C2' G B 3 -9.899 -5.874 5.541 1.00 8.28 C
ATOM 11 O2' G B 3 -10.820 -6.917 5.273 1.00 8.74 O
ATOM 12 C1' G B 3 -9.843 -5.645 7.023 1.00 8.50 C
ATOM 13 N9 G B 3 -9.458 -4.265 7.373 1.00 8.37 N
ATOM 14 C8 G B 3 -8.258 -3.804 7.846 1.00 9.09 C
ATOM 15 N7 G B 3 -8.271 -2.516 8.057 1.00 8.79 N
ATOM 16 C5 G B 3 -9.534 -2.101 7.701 1.00 8.49 C
ATOM 17 C6 G B 3 -10.140 -0.819 7.754 1.00 8.47 C
ATOM 18 O6 G B 3 -9.643 0.246 8.181 1.00 8.87 O
ATOM 19 N1 G B 3 -11.437 -0.829 7.268 1.00 8.25 N
ATOM 20 C2 G B 3 -12.090 -1.955 6.806 1.00 7.80 C
ATOM 21 N2 G B 3 -13.311 -1.765 6.312 1.00 8.77 N
ATOM 22 N3 G B 3 -11.543 -3.167 6.826 1.00 7.92 N
ATOM 23 C4 G B 3 -10.278 -3.167 7.281 1.00 7.80 C
ATOM 24 P C B 4 -7.725 -6.133 2.783 1.00 8.63 P
ATOM 25 OP1 C B 4 -7.545 -7.149 1.689 1.00 9.92 O
ATOM 26 OP2 C B 4 -6.594 -5.254 3.150 1.00 9.49 O
ATOM 27 O5' C B 4 -8.927 -5.174 2.440 1.00 8.15 O
TER
Atoms:
OP1: (-20.811,3.677,9.817)
OP2: (-18.534,4.635,10.380)
C3': (-17.970,-0.639,10.920)
C1': (-16.276,-0.698,9.335)
C5': (-19.423,1.066,9.564)
O6: (-11.193,1.559,11.606)
O4': (-17.347,0.079,8.838)
C8: (-15.285,1.497,10.198)
C2: (-12.250,-1.645,10.451)
C6: (-11.948,0.694,11.132)
C5: (-13.301,0.842,10.707)
C4: (-13.971,-0.256,10.208)
P: (-19.350,3.639,9.655)
C4': (-18.547,-0.172,9.601)
C2': (-16.892,-1.588,10.397)
O2': (-17.486,-2.729,9.809)
N1: (-11.480,-0.611,10.954)
N2: (-11.674,-2.848,10.373)
N3: (-13.508,-1.516,10.066)
N7: (-14.156,1.941,10.692)
N9: (-15.238,0.160,9.897)
O5': (-18.770,2.208,10.088)
O3': (-18.968,-1.340,11.657)
OP2: (-18.534,4.635,10.380)
C3': (-17.970,-0.639,10.920)
C1': (-16.276,-0.698,9.335)
C5': (-19.423,1.066,9.564)
O6: (-11.193,1.559,11.606)
O4': (-17.347,0.079,8.838)
C8: (-15.285,1.497,10.198)
C2: (-12.250,-1.645,10.451)
C6: (-11.948,0.694,11.132)
C5: (-13.301,0.842,10.707)
C4: (-13.971,-0.256,10.208)
P: (-19.350,3.639,9.655)
C4': (-18.547,-0.172,9.601)
C2': (-16.892,-1.588,10.397)
O2': (-17.486,-2.729,9.809)
N1: (-11.480,-0.611,10.954)
N2: (-11.674,-2.848,10.373)
N3: (-13.508,-1.516,10.066)
N7: (-14.156,1.941,10.692)
N9: (-15.238,0.160,9.897)
O5': (-18.770,2.208,10.088)
O3': (-18.968,-1.340,11.657)
OP1: (-3.822,-7.306,6.382)
OP2: (-4.098,-4.837,7.055)
C3': (-8.464,-6.294,5.274)
C1': (-9.843,-5.645,7.023)
C5': (-6.765,-7.484,6.736)
O6: (-9.643,0.246,8.181)
O4': (-8.840,-6.518,7.539)
C8: (-8.258,-3.804,7.846)
C2: (-12.090,-1.955,6.806)
C6: (-10.140,-0.819,7.754)
C5: (-9.534,-2.101,7.701)
C4: (-10.278,-3.167,7.281)
P: (-4.530,-6.240,7.172)
C4': (-8.213,-7.224,6.436)
C2': (-9.899,-5.874,5.541)
O2': (-10.820,-6.917,5.273)
N1: (-11.437,-0.829,7.268)
N2: (-13.311,-1.765,6.312)
N3: (-11.543,-3.167,6.826)
N7: (-8.271,-2.516,8.057)
N9: (-9.458,-4.265,7.373)
O5': (-6.067,-6.240,6.847)
O3': (-8.246,-6.954,4.049)
OP2: (-4.098,-4.837,7.055)
C3': (-8.464,-6.294,5.274)
C1': (-9.843,-5.645,7.023)
C5': (-6.765,-7.484,6.736)
O6: (-9.643,0.246,8.181)
O4': (-8.840,-6.518,7.539)
C8: (-8.258,-3.804,7.846)
C2: (-12.090,-1.955,6.806)
C6: (-10.140,-0.819,7.754)
C5: (-9.534,-2.101,7.701)
C4: (-10.278,-3.167,7.281)
P: (-4.530,-6.240,7.172)
C4': (-8.213,-7.224,6.436)
C2': (-9.899,-5.874,5.541)
O2': (-10.820,-6.917,5.273)
N1: (-11.437,-0.829,7.268)
N2: (-13.311,-1.765,6.312)
N3: (-11.543,-3.167,6.826)
N7: (-8.271,-2.516,8.057)
N9: (-9.458,-4.265,7.373)
O5': (-6.067,-6.240,6.847)
O3': (-8.246,-6.954,4.049)
Image (generated by PyMOL):