Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3JXQ:K1:L5
Extra
PDB:
ATOM 1 P G A 1 3.711 -0.805 -13.245 1.00 27.72 P
ATOM 2 OP1 G A 1 4.702 0.306 -13.185 1.00 31.51 O
ATOM 3 OP2 G A 1 3.695 -1.889 -12.230 1.00 28.45 O
ATOM 4 O5' G A 1 2.253 -0.177 -13.303 1.00 21.51 O
ATOM 5 C5' G A 1 1.913 0.874 -14.201 1.00 22.88 C
ATOM 6 C4' G A 1 0.414 1.037 -14.235 1.00 22.92 C
ATOM 7 O4' G A 1 -0.230 -0.158 -14.740 1.00 22.55 O
ATOM 8 C3' G A 1 -0.262 1.223 -12.877 1.00 22.75 C
ATOM 9 O3' G A 1 -0.142 2.585 -12.484 1.00 28.97 O
ATOM 10 C2' G A 1 -1.702 0.911 -13.237 1.00 23.31 C
ATOM 11 O2' G A 1 -2.304 1.947 -13.975 1.00 24.59 O
ATOM 12 C1' G A 1 -1.501 -0.310 -14.122 1.00 19.77 C
ATOM 13 N9 G A 1 -1.490 -1.533 -13.329 1.00 16.08 N
ATOM 14 C8 G A 1 -0.432 -2.329 -12.940 1.00 18.56 C
ATOM 15 N7 G A 1 -0.798 -3.352 -12.199 1.00 18.99 N
ATOM 16 C5 G A 1 -2.199 -3.230 -12.101 1.00 17.62 C
ATOM 17 C6 G A 1 -3.213 -4.012 -11.443 1.00 18.30 C
ATOM 18 O6 G A 1 -3.086 -5.054 -10.766 1.00 19.20 O
ATOM 19 N1 G A 1 -4.496 -3.462 -11.589 1.00 15.05 N
ATOM 20 C2 G A 1 -4.790 -2.317 -12.300 1.00 16.96 C
ATOM 21 N2 G A 1 -6.074 -1.918 -12.343 1.00 15.37 N
ATOM 22 N3 G A 1 -3.864 -1.603 -12.921 1.00 18.47 N
ATOM 23 C4 G A 1 -2.620 -2.104 -12.783 1.00 17.34 C
ATOM 24 P C A 2 -0.179 2.970 -10.936 1.00 27.83 P
ATOM 25 OP1 C A 2 0.085 4.436 -10.879 1.00 34.65 O
ATOM 26 OP2 C A 2 0.667 2.066 -10.168 1.00 25.86 O
ATOM 27 O5' C A 2 -1.724 2.752 -10.512 1.00 27.23 O
TER
ATOM 1 P G B 5 -12.852 -5.789 -13.138 1.00 25.67 P
ATOM 2 OP1 G B 5 -14.239 -5.725 -13.645 1.00 31.99 O
ATOM 3 OP2 G B 5 -12.125 -7.060 -13.145 1.00 23.28 O
ATOM 4 O5' G B 5 -11.909 -4.797 -13.990 1.00 22.96 O
ATOM 5 C5' G B 5 -12.339 -3.475 -14.272 1.00 21.04 C
ATOM 6 C4' G B 5 -11.250 -2.801 -15.082 1.00 18.94 C
ATOM 7 O4' G B 5 -10.042 -2.685 -14.278 1.00 19.75 O
ATOM 8 C3' G B 5 -10.769 -3.560 -16.304 1.00 17.01 C
ATOM 9 O3' G B 5 -11.676 -3.289 -17.376 1.00 18.24 O
ATOM 10 C2' G B 5 -9.426 -2.911 -16.556 1.00 15.25 C
ATOM 11 O2' G B 5 -9.539 -1.614 -17.103 1.00 16.93 O
ATOM 12 C1' G B 5 -8.907 -2.796 -15.125 1.00 18.20 C
ATOM 13 N9 G B 5 -8.058 -3.887 -14.633 1.00 15.22 N
ATOM 14 C8 G B 5 -8.431 -4.963 -13.856 1.00 14.29 C
ATOM 15 N7 G B 5 -7.445 -5.752 -13.542 1.00 17.37 N
ATOM 16 C5 G B 5 -6.335 -5.175 -14.145 1.00 15.84 C
ATOM 17 C6 G B 5 -4.968 -5.564 -14.158 1.00 19.15 C
ATOM 18 O6 G B 5 -4.447 -6.551 -13.610 1.00 20.43 O
ATOM 19 N1 G B 5 -4.170 -4.694 -14.897 1.00 17.50 N
ATOM 20 C2 G B 5 -4.627 -3.562 -15.549 1.00 16.12 C
ATOM 21 N2 G B 5 -3.725 -2.812 -16.192 1.00 16.04 N
ATOM 22 N3 G B 5 -5.905 -3.184 -15.528 1.00 15.11 N
ATOM 23 C4 G B 5 -6.696 -4.014 -14.815 1.00 15.36 C
TER
ATOM 2 OP1 G A 1 4.702 0.306 -13.185 1.00 31.51 O
ATOM 3 OP2 G A 1 3.695 -1.889 -12.230 1.00 28.45 O
ATOM 4 O5' G A 1 2.253 -0.177 -13.303 1.00 21.51 O
ATOM 5 C5' G A 1 1.913 0.874 -14.201 1.00 22.88 C
ATOM 6 C4' G A 1 0.414 1.037 -14.235 1.00 22.92 C
ATOM 7 O4' G A 1 -0.230 -0.158 -14.740 1.00 22.55 O
ATOM 8 C3' G A 1 -0.262 1.223 -12.877 1.00 22.75 C
ATOM 9 O3' G A 1 -0.142 2.585 -12.484 1.00 28.97 O
ATOM 10 C2' G A 1 -1.702 0.911 -13.237 1.00 23.31 C
ATOM 11 O2' G A 1 -2.304 1.947 -13.975 1.00 24.59 O
ATOM 12 C1' G A 1 -1.501 -0.310 -14.122 1.00 19.77 C
ATOM 13 N9 G A 1 -1.490 -1.533 -13.329 1.00 16.08 N
ATOM 14 C8 G A 1 -0.432 -2.329 -12.940 1.00 18.56 C
ATOM 15 N7 G A 1 -0.798 -3.352 -12.199 1.00 18.99 N
ATOM 16 C5 G A 1 -2.199 -3.230 -12.101 1.00 17.62 C
ATOM 17 C6 G A 1 -3.213 -4.012 -11.443 1.00 18.30 C
ATOM 18 O6 G A 1 -3.086 -5.054 -10.766 1.00 19.20 O
ATOM 19 N1 G A 1 -4.496 -3.462 -11.589 1.00 15.05 N
ATOM 20 C2 G A 1 -4.790 -2.317 -12.300 1.00 16.96 C
ATOM 21 N2 G A 1 -6.074 -1.918 -12.343 1.00 15.37 N
ATOM 22 N3 G A 1 -3.864 -1.603 -12.921 1.00 18.47 N
ATOM 23 C4 G A 1 -2.620 -2.104 -12.783 1.00 17.34 C
ATOM 24 P C A 2 -0.179 2.970 -10.936 1.00 27.83 P
ATOM 25 OP1 C A 2 0.085 4.436 -10.879 1.00 34.65 O
ATOM 26 OP2 C A 2 0.667 2.066 -10.168 1.00 25.86 O
ATOM 27 O5' C A 2 -1.724 2.752 -10.512 1.00 27.23 O
TER
ATOM 1 P G B 5 -12.852 -5.789 -13.138 1.00 25.67 P
ATOM 2 OP1 G B 5 -14.239 -5.725 -13.645 1.00 31.99 O
ATOM 3 OP2 G B 5 -12.125 -7.060 -13.145 1.00 23.28 O
ATOM 4 O5' G B 5 -11.909 -4.797 -13.990 1.00 22.96 O
ATOM 5 C5' G B 5 -12.339 -3.475 -14.272 1.00 21.04 C
ATOM 6 C4' G B 5 -11.250 -2.801 -15.082 1.00 18.94 C
ATOM 7 O4' G B 5 -10.042 -2.685 -14.278 1.00 19.75 O
ATOM 8 C3' G B 5 -10.769 -3.560 -16.304 1.00 17.01 C
ATOM 9 O3' G B 5 -11.676 -3.289 -17.376 1.00 18.24 O
ATOM 10 C2' G B 5 -9.426 -2.911 -16.556 1.00 15.25 C
ATOM 11 O2' G B 5 -9.539 -1.614 -17.103 1.00 16.93 O
ATOM 12 C1' G B 5 -8.907 -2.796 -15.125 1.00 18.20 C
ATOM 13 N9 G B 5 -8.058 -3.887 -14.633 1.00 15.22 N
ATOM 14 C8 G B 5 -8.431 -4.963 -13.856 1.00 14.29 C
ATOM 15 N7 G B 5 -7.445 -5.752 -13.542 1.00 17.37 N
ATOM 16 C5 G B 5 -6.335 -5.175 -14.145 1.00 15.84 C
ATOM 17 C6 G B 5 -4.968 -5.564 -14.158 1.00 19.15 C
ATOM 18 O6 G B 5 -4.447 -6.551 -13.610 1.00 20.43 O
ATOM 19 N1 G B 5 -4.170 -4.694 -14.897 1.00 17.50 N
ATOM 20 C2 G B 5 -4.627 -3.562 -15.549 1.00 16.12 C
ATOM 21 N2 G B 5 -3.725 -2.812 -16.192 1.00 16.04 N
ATOM 22 N3 G B 5 -5.905 -3.184 -15.528 1.00 15.11 N
ATOM 23 C4 G B 5 -6.696 -4.014 -14.815 1.00 15.36 C
TER
Atoms:
OP1: (4.702,0.306,-13.185)
OP2: (3.695,-1.889,-12.230)
C3': (-0.262,1.223,-12.877)
C1': (-1.501,-0.310,-14.122)
C5': (1.913,0.874,-14.201)
O6: (-3.086,-5.054,-10.766)
O4': (-0.230,-0.158,-14.740)
C8: (-0.432,-2.329,-12.940)
C2: (-4.790,-2.317,-12.300)
C6: (-3.213,-4.012,-11.443)
C5: (-2.199,-3.230,-12.101)
C4: (-2.620,-2.104,-12.783)
P: (3.711,-0.805,-13.245)
C4': (0.414,1.037,-14.235)
C2': (-1.702,0.911,-13.237)
O2': (-2.304,1.947,-13.975)
N1: (-4.496,-3.462,-11.589)
N2: (-6.074,-1.918,-12.343)
N3: (-3.864,-1.603,-12.921)
N7: (-0.798,-3.352,-12.199)
N9: (-1.490,-1.533,-13.329)
O5': (2.253,-0.177,-13.303)
O3': (-0.142,2.585,-12.484)
OP2: (3.695,-1.889,-12.230)
C3': (-0.262,1.223,-12.877)
C1': (-1.501,-0.310,-14.122)
C5': (1.913,0.874,-14.201)
O6: (-3.086,-5.054,-10.766)
O4': (-0.230,-0.158,-14.740)
C8: (-0.432,-2.329,-12.940)
C2: (-4.790,-2.317,-12.300)
C6: (-3.213,-4.012,-11.443)
C5: (-2.199,-3.230,-12.101)
C4: (-2.620,-2.104,-12.783)
P: (3.711,-0.805,-13.245)
C4': (0.414,1.037,-14.235)
C2': (-1.702,0.911,-13.237)
O2': (-2.304,1.947,-13.975)
N1: (-4.496,-3.462,-11.589)
N2: (-6.074,-1.918,-12.343)
N3: (-3.864,-1.603,-12.921)
N7: (-0.798,-3.352,-12.199)
N9: (-1.490,-1.533,-13.329)
O5': (2.253,-0.177,-13.303)
O3': (-0.142,2.585,-12.484)
OP1: (-14.239,-5.725,-13.645)
OP2: (-12.125,-7.060,-13.145)
C3': (-10.769,-3.560,-16.304)
C1': (-8.907,-2.796,-15.125)
C5': (-12.339,-3.475,-14.272)
O6: (-4.447,-6.551,-13.610)
O4': (-10.042,-2.685,-14.278)
C8: (-8.431,-4.963,-13.856)
C2: (-4.627,-3.562,-15.549)
C6: (-4.968,-5.564,-14.158)
C5: (-6.335,-5.175,-14.145)
C4: (-6.696,-4.014,-14.815)
P: (-12.852,-5.789,-13.138)
C4': (-11.250,-2.801,-15.082)
C2': (-9.426,-2.911,-16.556)
O2': (-9.539,-1.614,-17.103)
N1: (-4.170,-4.694,-14.897)
N2: (-3.725,-2.812,-16.192)
N3: (-5.905,-3.184,-15.528)
N7: (-7.445,-5.752,-13.542)
N9: (-8.058,-3.887,-14.633)
O5': (-11.909,-4.797,-13.990)
O3': (-11.676,-3.289,-17.376)
OP2: (-12.125,-7.060,-13.145)
C3': (-10.769,-3.560,-16.304)
C1': (-8.907,-2.796,-15.125)
C5': (-12.339,-3.475,-14.272)
O6: (-4.447,-6.551,-13.610)
O4': (-10.042,-2.685,-14.278)
C8: (-8.431,-4.963,-13.856)
C2: (-4.627,-3.562,-15.549)
C6: (-4.968,-5.564,-14.158)
C5: (-6.335,-5.175,-14.145)
C4: (-6.696,-4.014,-14.815)
P: (-12.852,-5.789,-13.138)
C4': (-11.250,-2.801,-15.082)
C2': (-9.426,-2.911,-16.556)
O2': (-9.539,-1.614,-17.103)
N1: (-4.170,-4.694,-14.897)
N2: (-3.725,-2.812,-16.192)
N3: (-5.905,-3.184,-15.528)
N7: (-7.445,-5.752,-13.542)
N9: (-8.058,-3.887,-14.633)
O5': (-11.909,-4.797,-13.990)
O3': (-11.676,-3.289,-17.376)
Image (generated by PyMOL):