Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1RPU:C18:D1
Extra
PDB:
ATOM 1 O3' C A 17 -7.424 20.447 96.107 0.60 39.81 O
ATOM 2 P G A 18 -7.929 21.100 97.479 0.60 42.04 P
ATOM 3 OP1 G A 18 -7.403 20.269 98.590 0.60 42.66 O
ATOM 4 OP2 G A 18 -9.386 21.361 97.390 0.60 42.94 O
ATOM 5 O5' G A 18 -7.174 22.498 97.488 0.60 43.26 O
ATOM 6 C5' G A 18 -5.761 22.545 97.376 0.60 44.27 C
ATOM 7 C4' G A 18 -5.306 23.953 97.101 0.60 46.72 C
ATOM 8 O4' G A 18 -5.692 24.351 95.762 0.60 46.57 O
ATOM 9 C3' G A 18 -5.912 25.036 97.980 0.60 46.47 C
ATOM 10 O3' G A 18 -5.245 25.082 99.237 0.60 47.38 O
ATOM 11 C2' G A 18 -5.639 26.286 97.150 0.60 46.52 C
ATOM 12 O2' G A 18 -4.308 26.750 97.282 0.60 44.03 O
ATOM 13 C1' G A 18 -5.847 25.758 95.726 0.60 46.84 C
ATOM 14 N9 G A 18 -7.149 26.084 95.152 0.60 47.06 N
ATOM 15 C8 G A 18 -8.246 25.267 95.011 0.60 48.03 C
ATOM 16 N7 G A 18 -9.259 25.866 94.441 0.60 47.34 N
ATOM 17 C5 G A 18 -8.801 27.154 94.196 0.60 47.07 C
ATOM 18 C6 G A 18 -9.447 28.269 93.598 0.60 47.27 C
ATOM 19 O6 G A 18 -10.597 28.347 93.142 0.60 48.16 O
ATOM 20 N1 G A 18 -8.611 29.379 93.555 0.60 46.33 N
ATOM 21 C2 G A 18 -7.324 29.416 94.020 0.60 45.70 C
ATOM 22 N2 G A 18 -6.675 30.572 93.883 0.60 45.08 N
ATOM 23 N3 G A 18 -6.714 28.391 94.578 0.60 46.77 N
ATOM 24 C4 G A 18 -7.504 27.301 94.632 0.60 47.09 C
ATOM 25 P U A 19 -6.079 25.383 100.576 0.60 46.25 P
ATOM 26 OP1 U A 19 -5.416 24.603 101.647 0.60 46.58 O
ATOM 27 OP2 U A 19 -7.515 25.163 100.310 0.60 46.37 O
ATOM 28 O5' U A 19 -5.816 26.940 100.847 0.60 50.15 O
TER
ATOM 1 O3' C B 0 -6.955 35.925 88.195 0.60 25.91 O
ATOM 2 P G B 1 -6.546 34.831 87.102 0.60 27.42 P
ATOM 3 OP1 G B 1 -5.576 35.471 86.179 0.60 25.24 O
ATOM 4 OP2 G B 1 -7.796 34.220 86.569 0.60 25.90 O
ATOM 5 O5' G B 1 -5.781 33.728 87.948 0.60 27.13 O
ATOM 6 C5' G B 1 -4.571 34.048 88.611 0.60 29.96 C
ATOM 7 C4' G B 1 -4.028 32.833 89.306 0.60 31.22 C
ATOM 8 O4' G B 1 -4.978 32.406 90.316 0.60 31.82 O
ATOM 9 C3' G B 1 -3.878 31.606 88.429 0.60 31.90 C
ATOM 10 O3' G B 1 -2.681 31.656 87.666 0.60 34.57 O
ATOM 11 C2' G B 1 -3.856 30.502 89.470 0.60 31.77 C
ATOM 12 O2' G B 1 -2.619 30.460 90.151 0.60 31.99 O
ATOM 13 C1' G B 1 -4.932 30.996 90.437 0.60 32.00 C
ATOM 14 N9 G B 1 -6.265 30.458 90.173 0.60 30.71 N
ATOM 15 C8 G B 1 -7.312 31.075 89.533 0.60 30.13 C
ATOM 16 N7 G B 1 -8.388 30.337 89.480 0.60 28.80 N
ATOM 17 C5 G B 1 -8.025 29.160 90.121 0.60 31.45 C
ATOM 18 C6 G B 1 -8.776 27.972 90.385 0.60 32.73 C
ATOM 19 O6 G B 1 -9.960 27.716 90.099 0.60 32.50 O
ATOM 20 N1 G B 1 -8.005 27.026 91.055 0.60 32.81 N
ATOM 21 C2 G B 1 -6.695 27.191 91.427 0.60 31.76 C
ATOM 22 N2 G B 1 -6.128 26.165 92.071 0.60 32.72 N
ATOM 23 N3 G B 1 -5.991 28.282 91.190 0.60 31.67 N
ATOM 24 C4 G B 1 -6.713 29.219 90.541 0.60 30.82 C
ATOM 25 P U B 2 -2.640 30.959 86.218 0.60 35.22 P
ATOM 26 OP1 U B 2 -1.329 31.236 85.579 0.60 35.89 O
ATOM 27 OP2 U B 2 -3.894 31.316 85.505 0.60 36.47 O
ATOM 28 O5' U B 2 -2.687 29.412 86.567 0.60 37.50 O
TER
ATOM 2 P G A 18 -7.929 21.100 97.479 0.60 42.04 P
ATOM 3 OP1 G A 18 -7.403 20.269 98.590 0.60 42.66 O
ATOM 4 OP2 G A 18 -9.386 21.361 97.390 0.60 42.94 O
ATOM 5 O5' G A 18 -7.174 22.498 97.488 0.60 43.26 O
ATOM 6 C5' G A 18 -5.761 22.545 97.376 0.60 44.27 C
ATOM 7 C4' G A 18 -5.306 23.953 97.101 0.60 46.72 C
ATOM 8 O4' G A 18 -5.692 24.351 95.762 0.60 46.57 O
ATOM 9 C3' G A 18 -5.912 25.036 97.980 0.60 46.47 C
ATOM 10 O3' G A 18 -5.245 25.082 99.237 0.60 47.38 O
ATOM 11 C2' G A 18 -5.639 26.286 97.150 0.60 46.52 C
ATOM 12 O2' G A 18 -4.308 26.750 97.282 0.60 44.03 O
ATOM 13 C1' G A 18 -5.847 25.758 95.726 0.60 46.84 C
ATOM 14 N9 G A 18 -7.149 26.084 95.152 0.60 47.06 N
ATOM 15 C8 G A 18 -8.246 25.267 95.011 0.60 48.03 C
ATOM 16 N7 G A 18 -9.259 25.866 94.441 0.60 47.34 N
ATOM 17 C5 G A 18 -8.801 27.154 94.196 0.60 47.07 C
ATOM 18 C6 G A 18 -9.447 28.269 93.598 0.60 47.27 C
ATOM 19 O6 G A 18 -10.597 28.347 93.142 0.60 48.16 O
ATOM 20 N1 G A 18 -8.611 29.379 93.555 0.60 46.33 N
ATOM 21 C2 G A 18 -7.324 29.416 94.020 0.60 45.70 C
ATOM 22 N2 G A 18 -6.675 30.572 93.883 0.60 45.08 N
ATOM 23 N3 G A 18 -6.714 28.391 94.578 0.60 46.77 N
ATOM 24 C4 G A 18 -7.504 27.301 94.632 0.60 47.09 C
ATOM 25 P U A 19 -6.079 25.383 100.576 0.60 46.25 P
ATOM 26 OP1 U A 19 -5.416 24.603 101.647 0.60 46.58 O
ATOM 27 OP2 U A 19 -7.515 25.163 100.310 0.60 46.37 O
ATOM 28 O5' U A 19 -5.816 26.940 100.847 0.60 50.15 O
TER
ATOM 1 O3' C B 0 -6.955 35.925 88.195 0.60 25.91 O
ATOM 2 P G B 1 -6.546 34.831 87.102 0.60 27.42 P
ATOM 3 OP1 G B 1 -5.576 35.471 86.179 0.60 25.24 O
ATOM 4 OP2 G B 1 -7.796 34.220 86.569 0.60 25.90 O
ATOM 5 O5' G B 1 -5.781 33.728 87.948 0.60 27.13 O
ATOM 6 C5' G B 1 -4.571 34.048 88.611 0.60 29.96 C
ATOM 7 C4' G B 1 -4.028 32.833 89.306 0.60 31.22 C
ATOM 8 O4' G B 1 -4.978 32.406 90.316 0.60 31.82 O
ATOM 9 C3' G B 1 -3.878 31.606 88.429 0.60 31.90 C
ATOM 10 O3' G B 1 -2.681 31.656 87.666 0.60 34.57 O
ATOM 11 C2' G B 1 -3.856 30.502 89.470 0.60 31.77 C
ATOM 12 O2' G B 1 -2.619 30.460 90.151 0.60 31.99 O
ATOM 13 C1' G B 1 -4.932 30.996 90.437 0.60 32.00 C
ATOM 14 N9 G B 1 -6.265 30.458 90.173 0.60 30.71 N
ATOM 15 C8 G B 1 -7.312 31.075 89.533 0.60 30.13 C
ATOM 16 N7 G B 1 -8.388 30.337 89.480 0.60 28.80 N
ATOM 17 C5 G B 1 -8.025 29.160 90.121 0.60 31.45 C
ATOM 18 C6 G B 1 -8.776 27.972 90.385 0.60 32.73 C
ATOM 19 O6 G B 1 -9.960 27.716 90.099 0.60 32.50 O
ATOM 20 N1 G B 1 -8.005 27.026 91.055 0.60 32.81 N
ATOM 21 C2 G B 1 -6.695 27.191 91.427 0.60 31.76 C
ATOM 22 N2 G B 1 -6.128 26.165 92.071 0.60 32.72 N
ATOM 23 N3 G B 1 -5.991 28.282 91.190 0.60 31.67 N
ATOM 24 C4 G B 1 -6.713 29.219 90.541 0.60 30.82 C
ATOM 25 P U B 2 -2.640 30.959 86.218 0.60 35.22 P
ATOM 26 OP1 U B 2 -1.329 31.236 85.579 0.60 35.89 O
ATOM 27 OP2 U B 2 -3.894 31.316 85.505 0.60 36.47 O
ATOM 28 O5' U B 2 -2.687 29.412 86.567 0.60 37.50 O
TER
Atoms:
OP1: (-7.403,20.269,98.590)
OP2: (-9.386,21.361,97.390)
C3': (-5.912,25.036,97.980)
C1': (-5.847,25.758,95.726)
C5': (-5.761,22.545,97.376)
O6: (-10.597,28.347,93.142)
O4': (-5.692,24.351,95.762)
C8: (-8.246,25.267,95.011)
C2: (-7.324,29.416,94.020)
C6: (-9.447,28.269,93.598)
C5: (-8.801,27.154,94.196)
C4: (-7.504,27.301,94.632)
P: (-7.929,21.100,97.479)
C4': (-5.306,23.953,97.101)
C2': (-5.639,26.286,97.150)
O2': (-4.308,26.750,97.282)
N1: (-8.611,29.379,93.555)
N2: (-6.675,30.572,93.883)
N3: (-6.714,28.391,94.578)
N7: (-9.259,25.866,94.441)
N9: (-7.149,26.084,95.152)
O5': (-7.174,22.498,97.488)
O3': (-5.245,25.082,99.237)
OP2: (-9.386,21.361,97.390)
C3': (-5.912,25.036,97.980)
C1': (-5.847,25.758,95.726)
C5': (-5.761,22.545,97.376)
O6: (-10.597,28.347,93.142)
O4': (-5.692,24.351,95.762)
C8: (-8.246,25.267,95.011)
C2: (-7.324,29.416,94.020)
C6: (-9.447,28.269,93.598)
C5: (-8.801,27.154,94.196)
C4: (-7.504,27.301,94.632)
P: (-7.929,21.100,97.479)
C4': (-5.306,23.953,97.101)
C2': (-5.639,26.286,97.150)
O2': (-4.308,26.750,97.282)
N1: (-8.611,29.379,93.555)
N2: (-6.675,30.572,93.883)
N3: (-6.714,28.391,94.578)
N7: (-9.259,25.866,94.441)
N9: (-7.149,26.084,95.152)
O5': (-7.174,22.498,97.488)
O3': (-5.245,25.082,99.237)
OP1: (-5.576,35.471,86.179)
OP2: (-7.796,34.220,86.569)
C3': (-3.878,31.606,88.429)
C1': (-4.932,30.996,90.437)
C5': (-4.571,34.048,88.611)
O6: (-9.960,27.716,90.099)
O4': (-4.978,32.406,90.316)
C8: (-7.312,31.075,89.533)
C2: (-6.695,27.191,91.427)
C6: (-8.776,27.972,90.385)
C5: (-8.025,29.160,90.121)
C4: (-6.713,29.219,90.541)
P: (-6.546,34.831,87.102)
C4': (-4.028,32.833,89.306)
C2': (-3.856,30.502,89.470)
O2': (-2.619,30.460,90.151)
N1: (-8.005,27.026,91.055)
N2: (-6.128,26.165,92.071)
N3: (-5.991,28.282,91.190)
N7: (-8.388,30.337,89.480)
N9: (-6.265,30.458,90.173)
O5': (-5.781,33.728,87.948)
O3': (-2.681,31.656,87.666)
OP2: (-7.796,34.220,86.569)
C3': (-3.878,31.606,88.429)
C1': (-4.932,30.996,90.437)
C5': (-4.571,34.048,88.611)
O6: (-9.960,27.716,90.099)
O4': (-4.978,32.406,90.316)
C8: (-7.312,31.075,89.533)
C2: (-6.695,27.191,91.427)
C6: (-8.776,27.972,90.385)
C5: (-8.025,29.160,90.121)
C4: (-6.713,29.219,90.541)
P: (-6.546,34.831,87.102)
C4': (-4.028,32.833,89.306)
C2': (-3.856,30.502,89.470)
O2': (-2.619,30.460,90.151)
N1: (-8.005,27.026,91.055)
N2: (-6.128,26.165,92.071)
N3: (-5.991,28.282,91.190)
N7: (-8.388,30.337,89.480)
N9: (-6.265,30.458,90.173)
O5': (-5.781,33.728,87.948)
O3': (-2.681,31.656,87.666)
Image (generated by PyMOL):