Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0128:0130
Extra
PDB:
ATOM 1 O3' C A 127 96.638 145.508 13.148 1.00 76.28 O
ATOM 2 P G A 128 96.867 147.048 13.549 1.00 73.90 P
ATOM 3 OP1 G A 128 97.790 147.666 12.555 1.00 73.90 O
ATOM 4 OP2 G A 128 97.198 147.109 14.996 1.00 73.20 O
ATOM 5 O5' G A 128 95.429 147.688 13.326 1.00 69.43 O
ATOM 6 C5' G A 128 95.228 149.094 13.434 1.00 63.37 C
ATOM 7 C4' G A 128 93.765 149.392 13.634 1.00 59.71 C
ATOM 8 O4' G A 128 93.016 149.056 12.449 1.00 58.84 O
ATOM 9 C3' G A 128 93.066 148.559 14.688 1.00 57.19 C
ATOM 10 O3' G A 128 93.408 149.066 15.972 1.00 55.57 O
ATOM 11 C2' G A 128 91.591 148.767 14.333 1.00 58.01 C
ATOM 12 O2' G A 128 91.053 149.961 14.872 1.00 56.43 O
ATOM 13 C1' G A 128 91.655 148.900 12.804 1.00 58.17 C
ATOM 14 N9 G A 128 91.098 147.810 12.010 1.00 58.57 N
ATOM 15 C8 G A 128 90.354 147.941 10.865 1.00 58.40 C
ATOM 16 N7 G A 128 90.030 146.798 10.329 1.00 59.08 N
ATOM 17 C5 G A 128 90.587 145.851 11.176 1.00 59.13 C
ATOM 18 C6 G A 128 90.576 144.437 11.105 1.00 59.88 C
ATOM 19 O6 G A 128 90.069 143.711 10.240 1.00 59.02 O
ATOM 20 N1 G A 128 91.242 143.867 12.182 1.00 60.68 N
ATOM 21 C2 G A 128 91.844 144.561 13.197 1.00 60.57 C
ATOM 22 N2 G A 128 92.419 143.821 14.164 1.00 60.38 N
ATOM 23 N3 G A 128 91.878 145.882 13.266 1.00 60.83 N
ATOM 24 C4 G A 128 91.234 146.458 12.230 1.00 58.96 C
ATOM 25 P C A 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 26 OP1 C A 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 27 OP2 C A 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 28 O5' C A 129 91.308 148.895 17.317 1.00 52.80 O
TER
ATOM 1 O3' C B 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 2 P G B 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 3 OP1 G B 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 4 OP2 G B 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 5 O5' G B 130 85.975 149.478 14.005 1.00 50.94 O
ATOM 6 C5' G B 130 85.877 149.998 12.675 1.00 49.09 C
ATOM 7 C4' G B 130 85.704 148.864 11.689 1.00 49.63 C
ATOM 8 O4' G B 130 86.950 148.134 11.533 1.00 50.02 O
ATOM 9 C3' G B 130 84.714 147.790 12.098 1.00 48.98 C
ATOM 10 O3' G B 130 83.377 148.166 11.836 1.00 50.04 O
ATOM 11 C2' G B 130 85.147 146.611 11.246 1.00 48.37 C
ATOM 12 O2' G B 130 84.691 146.736 9.921 1.00 47.59 O
ATOM 13 C1' G B 130 86.668 146.769 11.270 1.00 48.49 C
ATOM 14 N9 G B 130 87.346 145.947 12.270 1.00 48.71 N
ATOM 15 C8 G B 130 88.102 146.383 13.334 1.00 49.87 C
ATOM 16 N7 G B 130 88.653 145.408 14.006 1.00 49.87 N
ATOM 17 C5 G B 130 88.221 144.256 13.359 1.00 48.93 C
ATOM 18 C6 G B 130 88.507 142.887 13.620 1.00 48.54 C
ATOM 19 O6 G B 130 89.237 142.403 14.497 1.00 47.62 O
ATOM 20 N1 G B 130 87.848 142.048 12.726 1.00 47.63 N
ATOM 21 C2 G B 130 87.024 142.467 11.711 1.00 47.52 C
ATOM 22 N2 G B 130 86.473 141.507 10.960 1.00 47.44 N
ATOM 23 N3 G B 130 86.757 143.734 11.452 1.00 48.75 N
ATOM 24 C4 G B 130 87.389 144.570 12.304 1.00 48.66 C
ATOM 25 P C B 131 82.194 147.492 12.682 1.00 50.18 P
ATOM 26 OP1 C B 131 80.906 148.060 12.209 1.00 49.41 O
ATOM 27 OP2 C B 131 82.550 147.570 14.129 1.00 48.94 O
ATOM 28 O5' C B 131 82.242 145.973 12.220 1.00 47.87 O
TER
ATOM 2 P G A 128 96.867 147.048 13.549 1.00 73.90 P
ATOM 3 OP1 G A 128 97.790 147.666 12.555 1.00 73.90 O
ATOM 4 OP2 G A 128 97.198 147.109 14.996 1.00 73.20 O
ATOM 5 O5' G A 128 95.429 147.688 13.326 1.00 69.43 O
ATOM 6 C5' G A 128 95.228 149.094 13.434 1.00 63.37 C
ATOM 7 C4' G A 128 93.765 149.392 13.634 1.00 59.71 C
ATOM 8 O4' G A 128 93.016 149.056 12.449 1.00 58.84 O
ATOM 9 C3' G A 128 93.066 148.559 14.688 1.00 57.19 C
ATOM 10 O3' G A 128 93.408 149.066 15.972 1.00 55.57 O
ATOM 11 C2' G A 128 91.591 148.767 14.333 1.00 58.01 C
ATOM 12 O2' G A 128 91.053 149.961 14.872 1.00 56.43 O
ATOM 13 C1' G A 128 91.655 148.900 12.804 1.00 58.17 C
ATOM 14 N9 G A 128 91.098 147.810 12.010 1.00 58.57 N
ATOM 15 C8 G A 128 90.354 147.941 10.865 1.00 58.40 C
ATOM 16 N7 G A 128 90.030 146.798 10.329 1.00 59.08 N
ATOM 17 C5 G A 128 90.587 145.851 11.176 1.00 59.13 C
ATOM 18 C6 G A 128 90.576 144.437 11.105 1.00 59.88 C
ATOM 19 O6 G A 128 90.069 143.711 10.240 1.00 59.02 O
ATOM 20 N1 G A 128 91.242 143.867 12.182 1.00 60.68 N
ATOM 21 C2 G A 128 91.844 144.561 13.197 1.00 60.57 C
ATOM 22 N2 G A 128 92.419 143.821 14.164 1.00 60.38 N
ATOM 23 N3 G A 128 91.878 145.882 13.266 1.00 60.83 N
ATOM 24 C4 G A 128 91.234 146.458 12.230 1.00 58.96 C
ATOM 25 P C A 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 26 OP1 C A 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 27 OP2 C A 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 28 O5' C A 129 91.308 148.895 17.317 1.00 52.80 O
TER
ATOM 1 O3' C B 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 2 P G B 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 3 OP1 G B 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 4 OP2 G B 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 5 O5' G B 130 85.975 149.478 14.005 1.00 50.94 O
ATOM 6 C5' G B 130 85.877 149.998 12.675 1.00 49.09 C
ATOM 7 C4' G B 130 85.704 148.864 11.689 1.00 49.63 C
ATOM 8 O4' G B 130 86.950 148.134 11.533 1.00 50.02 O
ATOM 9 C3' G B 130 84.714 147.790 12.098 1.00 48.98 C
ATOM 10 O3' G B 130 83.377 148.166 11.836 1.00 50.04 O
ATOM 11 C2' G B 130 85.147 146.611 11.246 1.00 48.37 C
ATOM 12 O2' G B 130 84.691 146.736 9.921 1.00 47.59 O
ATOM 13 C1' G B 130 86.668 146.769 11.270 1.00 48.49 C
ATOM 14 N9 G B 130 87.346 145.947 12.270 1.00 48.71 N
ATOM 15 C8 G B 130 88.102 146.383 13.334 1.00 49.87 C
ATOM 16 N7 G B 130 88.653 145.408 14.006 1.00 49.87 N
ATOM 17 C5 G B 130 88.221 144.256 13.359 1.00 48.93 C
ATOM 18 C6 G B 130 88.507 142.887 13.620 1.00 48.54 C
ATOM 19 O6 G B 130 89.237 142.403 14.497 1.00 47.62 O
ATOM 20 N1 G B 130 87.848 142.048 12.726 1.00 47.63 N
ATOM 21 C2 G B 130 87.024 142.467 11.711 1.00 47.52 C
ATOM 22 N2 G B 130 86.473 141.507 10.960 1.00 47.44 N
ATOM 23 N3 G B 130 86.757 143.734 11.452 1.00 48.75 N
ATOM 24 C4 G B 130 87.389 144.570 12.304 1.00 48.66 C
ATOM 25 P C B 131 82.194 147.492 12.682 1.00 50.18 P
ATOM 26 OP1 C B 131 80.906 148.060 12.209 1.00 49.41 O
ATOM 27 OP2 C B 131 82.550 147.570 14.129 1.00 48.94 O
ATOM 28 O5' C B 131 82.242 145.973 12.220 1.00 47.87 O
TER
Atoms:
OP1: (97.790,147.666,12.555)
OP2: (97.198,147.109,14.996)
C3': (93.066,148.559,14.688)
C1': (91.655,148.900,12.804)
C5': (95.228,149.094,13.434)
O6: (90.069,143.711,10.240)
O4': (93.016,149.056,12.449)
C8: (90.354,147.941,10.865)
C2: (91.844,144.561,13.197)
C6: (90.576,144.437,11.105)
C5: (90.587,145.851,11.176)
C4: (91.234,146.458,12.230)
P: (96.867,147.048,13.549)
C4': (93.765,149.392,13.634)
C2': (91.591,148.767,14.333)
O2': (91.053,149.961,14.872)
N1: (91.242,143.867,12.182)
N2: (92.419,143.821,14.164)
N3: (91.878,145.882,13.266)
N7: (90.030,146.798,10.329)
N9: (91.098,147.810,12.010)
O5': (95.429,147.688,13.326)
O3': (93.408,149.066,15.972)
OP2: (97.198,147.109,14.996)
C3': (93.066,148.559,14.688)
C1': (91.655,148.900,12.804)
C5': (95.228,149.094,13.434)
O6: (90.069,143.711,10.240)
O4': (93.016,149.056,12.449)
C8: (90.354,147.941,10.865)
C2: (91.844,144.561,13.197)
C6: (90.576,144.437,11.105)
C5: (90.587,145.851,11.176)
C4: (91.234,146.458,12.230)
P: (96.867,147.048,13.549)
C4': (93.765,149.392,13.634)
C2': (91.591,148.767,14.333)
O2': (91.053,149.961,14.872)
N1: (91.242,143.867,12.182)
N2: (92.419,143.821,14.164)
N3: (91.878,145.882,13.266)
N7: (90.030,146.798,10.329)
N9: (91.098,147.810,12.010)
O5': (95.429,147.688,13.326)
O3': (93.408,149.066,15.972)
OP1: (88.378,150.112,14.235)
OP2: (86.568,151.115,15.782)
C3': (84.714,147.790,12.098)
C1': (86.668,146.769,11.270)
C5': (85.877,149.998,12.675)
O6: (89.237,142.403,14.497)
O4': (86.950,148.134,11.533)
C8: (88.102,146.383,13.334)
C2: (87.024,142.467,11.711)
C6: (88.507,142.887,13.620)
C5: (88.221,144.256,13.359)
C4: (87.389,144.570,12.304)
P: (87.112,149.962,15.009)
C4': (85.704,148.864,11.689)
C2': (85.147,146.611,11.246)
O2': (84.691,146.736,9.921)
N1: (87.848,142.048,12.726)
N2: (86.473,141.507,10.960)
N3: (86.757,143.734,11.452)
N7: (88.653,145.408,14.006)
N9: (87.346,145.947,12.270)
O5': (85.975,149.478,14.005)
O3': (83.377,148.166,11.836)
OP2: (86.568,151.115,15.782)
C3': (84.714,147.790,12.098)
C1': (86.668,146.769,11.270)
C5': (85.877,149.998,12.675)
O6: (89.237,142.403,14.497)
O4': (86.950,148.134,11.533)
C8: (88.102,146.383,13.334)
C2: (87.024,142.467,11.711)
C6: (88.507,142.887,13.620)
C5: (88.221,144.256,13.359)
C4: (87.389,144.570,12.304)
P: (87.112,149.962,15.009)
C4': (85.704,148.864,11.689)
C2': (85.147,146.611,11.246)
O2': (84.691,146.736,9.921)
N1: (87.848,142.048,12.726)
N2: (86.473,141.507,10.960)
N3: (86.757,143.734,11.452)
N7: (88.653,145.408,14.006)
N9: (87.346,145.947,12.270)
O5': (85.975,149.478,14.005)
O3': (83.377,148.166,11.836)
Image (generated by PyMOL):