Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3L25:C7:F1
Extra
PDB:
ATOM 1 O3' C A 6 -11.485 8.025 -27.101 1.00 8.53 O
ATOM 2 P G A 7 -11.450 9.105 -25.895 1.00 9.51 P
ATOM 3 OP1 G A 7 -10.040 9.257 -25.517 1.00 9.63 O
ATOM 4 OP2 G A 7 -12.452 8.699 -24.888 1.00 9.13 O
ATOM 5 O5' G A 7 -11.995 10.461 -26.541 1.00 10.15 O
ATOM 6 C5' G A 7 -11.254 11.085 -27.609 1.00 10.31 C
ATOM 7 C4' G A 7 -12.032 12.277 -28.123 1.00 10.51 C
ATOM 8 O4' G A 7 -13.302 11.835 -28.665 1.00 11.32 O
ATOM 9 C3' G A 7 -12.461 13.254 -27.052 1.00 11.06 C
ATOM 10 O3' G A 7 -11.378 14.097 -26.700 1.00 11.68 O
ATOM 11 C2' G A 7 -13.579 13.988 -27.782 1.00 12.31 C
ATOM 12 O2' G A 7 -13.101 14.808 -28.815 1.00 13.60 O
ATOM 13 C1' G A 7 -14.290 12.808 -28.429 1.00 11.02 C
ATOM 14 N9 G A 7 -15.361 12.213 -27.637 1.00 9.99 N
ATOM 15 C8 G A 7 -15.285 11.099 -26.834 1.00 8.94 C
ATOM 16 N7 G A 7 -16.422 10.804 -26.274 1.00 9.07 N
ATOM 17 C5 G A 7 -17.306 11.784 -26.723 1.00 8.90 C
ATOM 18 C6 G A 7 -18.673 11.997 -26.448 1.00 9.66 C
ATOM 19 O6 G A 7 -19.434 11.338 -25.726 1.00 11.22 O
ATOM 20 N1 G A 7 -19.182 13.098 -27.112 1.00 9.51 N
ATOM 21 C2 G A 7 -18.462 13.916 -27.939 1.00 9.40 C
ATOM 22 N2 G A 7 -19.133 14.958 -28.466 1.00 9.48 N
ATOM 23 N3 G A 7 -17.177 13.745 -28.202 1.00 10.28 N
ATOM 24 C4 G A 7 -16.661 12.660 -27.571 1.00 10.56 C
TER
ATOM 1 P G B 1 -26.805 15.407 -31.374 1.00 22.30 P
ATOM 2 OP1 G B 1 -27.727 16.036 -32.334 1.00 24.75 O
ATOM 3 OP2 G B 1 -27.102 14.096 -30.779 1.00 21.24 O
ATOM 4 O5' G B 1 -25.363 15.240 -32.042 1.00 19.76 O
ATOM 5 C5' G B 1 -24.679 16.300 -32.668 1.00 17.84 C
ATOM 6 C4' G B 1 -23.224 15.932 -32.883 1.00 15.89 C
ATOM 7 O4' G B 1 -22.583 15.706 -31.602 1.00 15.22 O
ATOM 8 C3' G B 1 -22.948 14.628 -33.617 1.00 14.94 C
ATOM 9 O3' G B 1 -23.098 14.797 -35.006 1.00 14.15 O
ATOM 10 C2' G B 1 -21.485 14.444 -33.257 1.00 14.25 C
ATOM 11 O2' G B 1 -20.606 15.328 -33.940 1.00 16.02 O
ATOM 12 C1' G B 1 -21.540 14.767 -31.774 1.00 12.58 C
ATOM 13 N9 G B 1 -21.779 13.605 -30.884 1.00 10.47 N
ATOM 14 C8 G B 1 -22.937 13.242 -30.255 1.00 10.13 C
ATOM 15 N7 G B 1 -22.793 12.163 -29.506 1.00 10.91 N
ATOM 16 C5 G B 1 -21.458 11.800 -29.658 1.00 10.21 C
ATOM 17 C6 G B 1 -20.698 10.730 -29.109 1.00 9.47 C
ATOM 18 O6 G B 1 -21.088 9.859 -28.342 1.00 10.39 O
ATOM 19 N1 G B 1 -19.373 10.728 -29.526 1.00 10.81 N
ATOM 20 C2 G B 1 -18.826 11.665 -30.383 1.00 10.81 C
ATOM 21 N2 G B 1 -17.528 11.559 -30.721 1.00 9.44 N
ATOM 22 N3 G B 1 -19.537 12.664 -30.892 1.00 11.19 N
ATOM 23 C4 G B 1 -20.830 12.679 -30.499 1.00 9.80 C
ATOM 24 P C B 2 -23.442 13.579 -35.994 1.00 14.55 P
ATOM 25 OP1 C B 2 -23.826 14.275 -37.228 1.00 13.93 O
ATOM 26 OP2 C B 2 -24.283 12.571 -35.297 1.00 14.97 O
ATOM 27 O5' C B 2 -22.008 12.851 -36.169 1.00 11.80 O
TER
ATOM 2 P G A 7 -11.450 9.105 -25.895 1.00 9.51 P
ATOM 3 OP1 G A 7 -10.040 9.257 -25.517 1.00 9.63 O
ATOM 4 OP2 G A 7 -12.452 8.699 -24.888 1.00 9.13 O
ATOM 5 O5' G A 7 -11.995 10.461 -26.541 1.00 10.15 O
ATOM 6 C5' G A 7 -11.254 11.085 -27.609 1.00 10.31 C
ATOM 7 C4' G A 7 -12.032 12.277 -28.123 1.00 10.51 C
ATOM 8 O4' G A 7 -13.302 11.835 -28.665 1.00 11.32 O
ATOM 9 C3' G A 7 -12.461 13.254 -27.052 1.00 11.06 C
ATOM 10 O3' G A 7 -11.378 14.097 -26.700 1.00 11.68 O
ATOM 11 C2' G A 7 -13.579 13.988 -27.782 1.00 12.31 C
ATOM 12 O2' G A 7 -13.101 14.808 -28.815 1.00 13.60 O
ATOM 13 C1' G A 7 -14.290 12.808 -28.429 1.00 11.02 C
ATOM 14 N9 G A 7 -15.361 12.213 -27.637 1.00 9.99 N
ATOM 15 C8 G A 7 -15.285 11.099 -26.834 1.00 8.94 C
ATOM 16 N7 G A 7 -16.422 10.804 -26.274 1.00 9.07 N
ATOM 17 C5 G A 7 -17.306 11.784 -26.723 1.00 8.90 C
ATOM 18 C6 G A 7 -18.673 11.997 -26.448 1.00 9.66 C
ATOM 19 O6 G A 7 -19.434 11.338 -25.726 1.00 11.22 O
ATOM 20 N1 G A 7 -19.182 13.098 -27.112 1.00 9.51 N
ATOM 21 C2 G A 7 -18.462 13.916 -27.939 1.00 9.40 C
ATOM 22 N2 G A 7 -19.133 14.958 -28.466 1.00 9.48 N
ATOM 23 N3 G A 7 -17.177 13.745 -28.202 1.00 10.28 N
ATOM 24 C4 G A 7 -16.661 12.660 -27.571 1.00 10.56 C
TER
ATOM 1 P G B 1 -26.805 15.407 -31.374 1.00 22.30 P
ATOM 2 OP1 G B 1 -27.727 16.036 -32.334 1.00 24.75 O
ATOM 3 OP2 G B 1 -27.102 14.096 -30.779 1.00 21.24 O
ATOM 4 O5' G B 1 -25.363 15.240 -32.042 1.00 19.76 O
ATOM 5 C5' G B 1 -24.679 16.300 -32.668 1.00 17.84 C
ATOM 6 C4' G B 1 -23.224 15.932 -32.883 1.00 15.89 C
ATOM 7 O4' G B 1 -22.583 15.706 -31.602 1.00 15.22 O
ATOM 8 C3' G B 1 -22.948 14.628 -33.617 1.00 14.94 C
ATOM 9 O3' G B 1 -23.098 14.797 -35.006 1.00 14.15 O
ATOM 10 C2' G B 1 -21.485 14.444 -33.257 1.00 14.25 C
ATOM 11 O2' G B 1 -20.606 15.328 -33.940 1.00 16.02 O
ATOM 12 C1' G B 1 -21.540 14.767 -31.774 1.00 12.58 C
ATOM 13 N9 G B 1 -21.779 13.605 -30.884 1.00 10.47 N
ATOM 14 C8 G B 1 -22.937 13.242 -30.255 1.00 10.13 C
ATOM 15 N7 G B 1 -22.793 12.163 -29.506 1.00 10.91 N
ATOM 16 C5 G B 1 -21.458 11.800 -29.658 1.00 10.21 C
ATOM 17 C6 G B 1 -20.698 10.730 -29.109 1.00 9.47 C
ATOM 18 O6 G B 1 -21.088 9.859 -28.342 1.00 10.39 O
ATOM 19 N1 G B 1 -19.373 10.728 -29.526 1.00 10.81 N
ATOM 20 C2 G B 1 -18.826 11.665 -30.383 1.00 10.81 C
ATOM 21 N2 G B 1 -17.528 11.559 -30.721 1.00 9.44 N
ATOM 22 N3 G B 1 -19.537 12.664 -30.892 1.00 11.19 N
ATOM 23 C4 G B 1 -20.830 12.679 -30.499 1.00 9.80 C
ATOM 24 P C B 2 -23.442 13.579 -35.994 1.00 14.55 P
ATOM 25 OP1 C B 2 -23.826 14.275 -37.228 1.00 13.93 O
ATOM 26 OP2 C B 2 -24.283 12.571 -35.297 1.00 14.97 O
ATOM 27 O5' C B 2 -22.008 12.851 -36.169 1.00 11.80 O
TER
Atoms:
OP1: (-10.040,9.257,-25.517)
OP2: (-12.452,8.699,-24.888)
C3': (-12.461,13.254,-27.052)
C1': (-14.290,12.808,-28.429)
C5': (-11.254,11.085,-27.609)
O6: (-19.434,11.338,-25.726)
O4': (-13.302,11.835,-28.665)
C8: (-15.285,11.099,-26.834)
C2: (-18.462,13.916,-27.939)
C6: (-18.673,11.997,-26.448)
C5: (-17.306,11.784,-26.723)
C4: (-16.661,12.660,-27.571)
P: (-11.450,9.105,-25.895)
C4': (-12.032,12.277,-28.123)
C2': (-13.579,13.988,-27.782)
O2': (-13.101,14.808,-28.815)
N1: (-19.182,13.098,-27.112)
N2: (-19.133,14.958,-28.466)
N3: (-17.177,13.745,-28.202)
N7: (-16.422,10.804,-26.274)
N9: (-15.361,12.213,-27.637)
O5': (-11.995,10.461,-26.541)
O3': (-11.378,14.097,-26.700)
OP2: (-12.452,8.699,-24.888)
C3': (-12.461,13.254,-27.052)
C1': (-14.290,12.808,-28.429)
C5': (-11.254,11.085,-27.609)
O6: (-19.434,11.338,-25.726)
O4': (-13.302,11.835,-28.665)
C8: (-15.285,11.099,-26.834)
C2: (-18.462,13.916,-27.939)
C6: (-18.673,11.997,-26.448)
C5: (-17.306,11.784,-26.723)
C4: (-16.661,12.660,-27.571)
P: (-11.450,9.105,-25.895)
C4': (-12.032,12.277,-28.123)
C2': (-13.579,13.988,-27.782)
O2': (-13.101,14.808,-28.815)
N1: (-19.182,13.098,-27.112)
N2: (-19.133,14.958,-28.466)
N3: (-17.177,13.745,-28.202)
N7: (-16.422,10.804,-26.274)
N9: (-15.361,12.213,-27.637)
O5': (-11.995,10.461,-26.541)
O3': (-11.378,14.097,-26.700)
OP1: (-27.727,16.036,-32.334)
OP2: (-27.102,14.096,-30.779)
C3': (-22.948,14.628,-33.617)
C1': (-21.540,14.767,-31.774)
C5': (-24.679,16.300,-32.668)
O6: (-21.088,9.859,-28.342)
O4': (-22.583,15.706,-31.602)
C8: (-22.937,13.242,-30.255)
C2: (-18.826,11.665,-30.383)
C6: (-20.698,10.730,-29.109)
C5: (-21.458,11.800,-29.658)
C4: (-20.830,12.679,-30.499)
P: (-26.805,15.407,-31.374)
C4': (-23.224,15.932,-32.883)
C2': (-21.485,14.444,-33.257)
O2': (-20.606,15.328,-33.940)
N1: (-19.373,10.728,-29.526)
N2: (-17.528,11.559,-30.721)
N3: (-19.537,12.664,-30.892)
N7: (-22.793,12.163,-29.506)
N9: (-21.779,13.605,-30.884)
O5': (-25.363,15.240,-32.042)
O3': (-23.098,14.797,-35.006)
OP2: (-27.102,14.096,-30.779)
C3': (-22.948,14.628,-33.617)
C1': (-21.540,14.767,-31.774)
C5': (-24.679,16.300,-32.668)
O6: (-21.088,9.859,-28.342)
O4': (-22.583,15.706,-31.602)
C8: (-22.937,13.242,-30.255)
C2: (-18.826,11.665,-30.383)
C6: (-20.698,10.730,-29.109)
C5: (-21.458,11.800,-29.658)
C4: (-20.830,12.679,-30.499)
P: (-26.805,15.407,-31.374)
C4': (-23.224,15.932,-32.883)
C2': (-21.485,14.444,-33.257)
O2': (-20.606,15.328,-33.940)
N1: (-19.373,10.728,-29.526)
N2: (-17.528,11.559,-30.721)
N3: (-19.537,12.664,-30.892)
N7: (-22.793,12.163,-29.506)
N9: (-21.779,13.605,-30.884)
O5': (-25.363,15.240,-32.042)
O3': (-23.098,14.797,-35.006)
Image (generated by PyMOL):