Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OG8:C11:D3
Extra
PDB:
ATOM 1 O3' C A 10 10.574 3.863 -9.808 1.00 31.76 O
ATOM 2 P G A 11 11.093 5.316 -9.350 1.00 33.55 P
ATOM 3 OP1 G A 11 12.251 5.693 -10.205 1.00 30.45 O
ATOM 4 OP2 G A 11 11.251 5.312 -7.869 1.00 33.62 O
ATOM 5 O5' G A 11 9.872 6.276 -9.700 1.00 31.57 O
ATOM 6 C5' G A 11 9.437 6.463 -11.045 1.00 28.43 C
ATOM 7 C4' G A 11 8.318 7.476 -11.087 1.00 28.97 C
ATOM 8 O4' G A 11 7.169 6.939 -10.377 1.00 33.05 O
ATOM 9 C3' G A 11 8.619 8.778 -10.364 1.00 29.83 C
ATOM 10 O3' G A 11 9.318 9.688 -11.191 1.00 28.54 O
ATOM 11 C2' G A 11 7.232 9.283 -9.993 1.00 32.03 C
ATOM 12 O2' G A 11 6.555 9.904 -11.068 1.00 32.07 O
ATOM 13 C1' G A 11 6.531 7.974 -9.640 1.00 32.75 C
ATOM 14 N9 G A 11 6.594 7.640 -8.220 1.00 28.77 N
ATOM 15 C8 G A 11 7.455 6.756 -7.611 1.00 27.02 C
ATOM 16 N7 G A 11 7.239 6.633 -6.330 1.00 25.55 N
ATOM 17 C5 G A 11 6.183 7.497 -6.075 1.00 24.64 C
ATOM 18 C6 G A 11 5.504 7.788 -4.860 1.00 21.19 C
ATOM 19 O6 G A 11 5.718 7.333 -3.734 1.00 26.19 O
ATOM 20 N1 G A 11 4.483 8.711 -5.053 1.00 13.76 N
ATOM 21 C2 G A 11 4.158 9.287 -6.259 1.00 17.72 C
ATOM 22 N2 G A 11 3.124 10.155 -6.255 1.00 8.74 N
ATOM 23 N3 G A 11 4.793 9.030 -7.395 1.00 20.00 N
ATOM 24 C4 G A 11 5.781 8.132 -7.231 1.00 24.86 C
ATOM 25 P C A 12 10.154 10.877 -10.517 1.00 33.78 P
ATOM 26 OP1 C A 12 10.838 11.657 -11.583 1.00 35.07 O
ATOM 27 OP2 C A 12 10.960 10.277 -9.425 1.00 35.01 O
ATOM 28 O5' C A 12 9.023 11.794 -9.873 1.00 35.44 O
TER
ATOM 1 O3' C B 2 -3.207 11.374 -1.760 1.00 23.39 O
ATOM 2 P G B 3 -3.941 9.967 -2.053 1.00 28.02 P
ATOM 3 OP1 G B 3 -5.388 10.267 -2.188 1.00 29.60 O
ATOM 4 OP2 G B 3 -3.491 8.950 -1.071 1.00 29.66 O
ATOM 5 O5' G B 3 -3.394 9.548 -3.493 1.00 30.11 O
ATOM 6 C5' G B 3 -3.742 10.312 -4.639 1.00 27.61 C
ATOM 7 C4' G B 3 -2.901 9.913 -5.828 1.00 29.11 C
ATOM 8 O4' G B 3 -1.499 10.120 -5.526 1.00 24.77 O
ATOM 9 C3' G B 3 -2.960 8.463 -6.281 1.00 28.08 C
ATOM 10 O3' G B 3 -4.110 8.204 -7.076 1.00 28.09 O
ATOM 11 C2' G B 3 -1.685 8.358 -7.103 1.00 25.15 C
ATOM 12 O2' G B 3 -1.807 8.939 -8.384 1.00 24.07 O
ATOM 13 C1' G B 3 -0.716 9.177 -6.247 1.00 26.24 C
ATOM 14 N9 G B 3 -0.031 8.316 -5.292 1.00 27.35 N
ATOM 15 C8 G B 3 -0.316 8.152 -3.955 1.00 29.13 C
ATOM 16 N7 G B 3 0.429 7.244 -3.381 1.00 29.80 N
ATOM 17 C5 G B 3 1.268 6.799 -4.394 1.00 29.23 C
ATOM 18 C6 G B 3 2.281 5.812 -4.378 1.00 26.03 C
ATOM 19 O6 G B 3 2.648 5.102 -3.437 1.00 27.19 O
ATOM 20 N1 G B 3 2.890 5.684 -5.620 1.00 22.77 N
ATOM 21 C2 G B 3 2.563 6.404 -6.739 1.00 22.97 C
ATOM 22 N2 G B 3 3.272 6.136 -7.842 1.00 17.68 N
ATOM 23 N3 G B 3 1.613 7.320 -6.773 1.00 28.63 N
ATOM 24 C4 G B 3 1.011 7.466 -5.574 1.00 29.23 C
ATOM 25 P C B 4 -4.815 6.761 -7.014 1.00 30.68 P
ATOM 26 OP1 C B 4 -6.129 6.866 -7.692 1.00 32.02 O
ATOM 27 OP2 C B 4 -4.761 6.294 -5.606 1.00 31.72 O
ATOM 28 O5' C B 4 -3.846 5.827 -7.872 1.00 30.24 O
TER
ATOM 2 P G A 11 11.093 5.316 -9.350 1.00 33.55 P
ATOM 3 OP1 G A 11 12.251 5.693 -10.205 1.00 30.45 O
ATOM 4 OP2 G A 11 11.251 5.312 -7.869 1.00 33.62 O
ATOM 5 O5' G A 11 9.872 6.276 -9.700 1.00 31.57 O
ATOM 6 C5' G A 11 9.437 6.463 -11.045 1.00 28.43 C
ATOM 7 C4' G A 11 8.318 7.476 -11.087 1.00 28.97 C
ATOM 8 O4' G A 11 7.169 6.939 -10.377 1.00 33.05 O
ATOM 9 C3' G A 11 8.619 8.778 -10.364 1.00 29.83 C
ATOM 10 O3' G A 11 9.318 9.688 -11.191 1.00 28.54 O
ATOM 11 C2' G A 11 7.232 9.283 -9.993 1.00 32.03 C
ATOM 12 O2' G A 11 6.555 9.904 -11.068 1.00 32.07 O
ATOM 13 C1' G A 11 6.531 7.974 -9.640 1.00 32.75 C
ATOM 14 N9 G A 11 6.594 7.640 -8.220 1.00 28.77 N
ATOM 15 C8 G A 11 7.455 6.756 -7.611 1.00 27.02 C
ATOM 16 N7 G A 11 7.239 6.633 -6.330 1.00 25.55 N
ATOM 17 C5 G A 11 6.183 7.497 -6.075 1.00 24.64 C
ATOM 18 C6 G A 11 5.504 7.788 -4.860 1.00 21.19 C
ATOM 19 O6 G A 11 5.718 7.333 -3.734 1.00 26.19 O
ATOM 20 N1 G A 11 4.483 8.711 -5.053 1.00 13.76 N
ATOM 21 C2 G A 11 4.158 9.287 -6.259 1.00 17.72 C
ATOM 22 N2 G A 11 3.124 10.155 -6.255 1.00 8.74 N
ATOM 23 N3 G A 11 4.793 9.030 -7.395 1.00 20.00 N
ATOM 24 C4 G A 11 5.781 8.132 -7.231 1.00 24.86 C
ATOM 25 P C A 12 10.154 10.877 -10.517 1.00 33.78 P
ATOM 26 OP1 C A 12 10.838 11.657 -11.583 1.00 35.07 O
ATOM 27 OP2 C A 12 10.960 10.277 -9.425 1.00 35.01 O
ATOM 28 O5' C A 12 9.023 11.794 -9.873 1.00 35.44 O
TER
ATOM 1 O3' C B 2 -3.207 11.374 -1.760 1.00 23.39 O
ATOM 2 P G B 3 -3.941 9.967 -2.053 1.00 28.02 P
ATOM 3 OP1 G B 3 -5.388 10.267 -2.188 1.00 29.60 O
ATOM 4 OP2 G B 3 -3.491 8.950 -1.071 1.00 29.66 O
ATOM 5 O5' G B 3 -3.394 9.548 -3.493 1.00 30.11 O
ATOM 6 C5' G B 3 -3.742 10.312 -4.639 1.00 27.61 C
ATOM 7 C4' G B 3 -2.901 9.913 -5.828 1.00 29.11 C
ATOM 8 O4' G B 3 -1.499 10.120 -5.526 1.00 24.77 O
ATOM 9 C3' G B 3 -2.960 8.463 -6.281 1.00 28.08 C
ATOM 10 O3' G B 3 -4.110 8.204 -7.076 1.00 28.09 O
ATOM 11 C2' G B 3 -1.685 8.358 -7.103 1.00 25.15 C
ATOM 12 O2' G B 3 -1.807 8.939 -8.384 1.00 24.07 O
ATOM 13 C1' G B 3 -0.716 9.177 -6.247 1.00 26.24 C
ATOM 14 N9 G B 3 -0.031 8.316 -5.292 1.00 27.35 N
ATOM 15 C8 G B 3 -0.316 8.152 -3.955 1.00 29.13 C
ATOM 16 N7 G B 3 0.429 7.244 -3.381 1.00 29.80 N
ATOM 17 C5 G B 3 1.268 6.799 -4.394 1.00 29.23 C
ATOM 18 C6 G B 3 2.281 5.812 -4.378 1.00 26.03 C
ATOM 19 O6 G B 3 2.648 5.102 -3.437 1.00 27.19 O
ATOM 20 N1 G B 3 2.890 5.684 -5.620 1.00 22.77 N
ATOM 21 C2 G B 3 2.563 6.404 -6.739 1.00 22.97 C
ATOM 22 N2 G B 3 3.272 6.136 -7.842 1.00 17.68 N
ATOM 23 N3 G B 3 1.613 7.320 -6.773 1.00 28.63 N
ATOM 24 C4 G B 3 1.011 7.466 -5.574 1.00 29.23 C
ATOM 25 P C B 4 -4.815 6.761 -7.014 1.00 30.68 P
ATOM 26 OP1 C B 4 -6.129 6.866 -7.692 1.00 32.02 O
ATOM 27 OP2 C B 4 -4.761 6.294 -5.606 1.00 31.72 O
ATOM 28 O5' C B 4 -3.846 5.827 -7.872 1.00 30.24 O
TER
Atoms:
OP1: (12.251,5.693,-10.205)
OP2: (11.251,5.312,-7.869)
C3': (8.619,8.778,-10.364)
C1': (6.531,7.974,-9.640)
C5': (9.437,6.463,-11.045)
O6: (5.718,7.333,-3.734)
O4': (7.169,6.939,-10.377)
C8: (7.455,6.756,-7.611)
C2: (4.158,9.287,-6.259)
C6: (5.504,7.788,-4.860)
C5: (6.183,7.497,-6.075)
C4: (5.781,8.132,-7.231)
P: (11.093,5.316,-9.350)
C4': (8.318,7.476,-11.087)
C2': (7.232,9.283,-9.993)
O2': (6.555,9.904,-11.068)
N1: (4.483,8.711,-5.053)
N2: (3.124,10.155,-6.255)
N3: (4.793,9.030,-7.395)
N7: (7.239,6.633,-6.330)
N9: (6.594,7.640,-8.220)
O5': (9.872,6.276,-9.700)
O3': (9.318,9.688,-11.191)
OP2: (11.251,5.312,-7.869)
C3': (8.619,8.778,-10.364)
C1': (6.531,7.974,-9.640)
C5': (9.437,6.463,-11.045)
O6: (5.718,7.333,-3.734)
O4': (7.169,6.939,-10.377)
C8: (7.455,6.756,-7.611)
C2: (4.158,9.287,-6.259)
C6: (5.504,7.788,-4.860)
C5: (6.183,7.497,-6.075)
C4: (5.781,8.132,-7.231)
P: (11.093,5.316,-9.350)
C4': (8.318,7.476,-11.087)
C2': (7.232,9.283,-9.993)
O2': (6.555,9.904,-11.068)
N1: (4.483,8.711,-5.053)
N2: (3.124,10.155,-6.255)
N3: (4.793,9.030,-7.395)
N7: (7.239,6.633,-6.330)
N9: (6.594,7.640,-8.220)
O5': (9.872,6.276,-9.700)
O3': (9.318,9.688,-11.191)
OP1: (-5.388,10.267,-2.188)
OP2: (-3.491,8.950,-1.071)
C3': (-2.960,8.463,-6.281)
C1': (-0.716,9.177,-6.247)
C5': (-3.742,10.312,-4.639)
O6: (2.648,5.102,-3.437)
O4': (-1.499,10.120,-5.526)
C8: (-0.316,8.152,-3.955)
C2: (2.563,6.404,-6.739)
C6: (2.281,5.812,-4.378)
C5: (1.268,6.799,-4.394)
C4: (1.011,7.466,-5.574)
P: (-3.941,9.967,-2.053)
C4': (-2.901,9.913,-5.828)
C2': (-1.685,8.358,-7.103)
O2': (-1.807,8.939,-8.384)
N1: (2.890,5.684,-5.620)
N2: (3.272,6.136,-7.842)
N3: (1.613,7.320,-6.773)
N7: (0.429,7.244,-3.381)
N9: (-0.031,8.316,-5.292)
O5': (-3.394,9.548,-3.493)
O3': (-4.110,8.204,-7.076)
OP2: (-3.491,8.950,-1.071)
C3': (-2.960,8.463,-6.281)
C1': (-0.716,9.177,-6.247)
C5': (-3.742,10.312,-4.639)
O6: (2.648,5.102,-3.437)
O4': (-1.499,10.120,-5.526)
C8: (-0.316,8.152,-3.955)
C2: (2.563,6.404,-6.739)
C6: (2.281,5.812,-4.378)
C5: (1.268,6.799,-4.394)
C4: (1.011,7.466,-5.574)
P: (-3.941,9.967,-2.053)
C4': (-2.901,9.913,-5.828)
C2': (-1.685,8.358,-7.103)
O2': (-1.807,8.939,-8.384)
N1: (2.890,5.684,-5.620)
N2: (3.272,6.136,-7.842)
N3: (1.613,7.320,-6.773)
N7: (0.429,7.244,-3.381)
N9: (-0.031,8.316,-5.292)
O5': (-3.394,9.548,-3.493)
O3': (-4.110,8.204,-7.076)
Image (generated by PyMOL):