ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R1C:A2:B6

Extra

PDB:
ATOM 1 O3' C A 1 10.606 43.145 -5.117 1.00 19.79 O
ATOM 2 P G A 2 11.661 42.720 -3.996 1.00 21.96 P
ATOM 3 OP1 G A 2 12.624 41.798 -4.635 1.00 21.69 O
ATOM 4 OP2 G A 2 10.958 42.379 -2.744 1.00 19.33 O
ATOM 5 O5' G A 2 12.413 44.110 -3.754 1.00 20.81 O
ATOM 6 C5' G A 2 13.136 44.690 -4.823 1.00 21.61 C
ATOM 7 C4' G A 2 13.591 46.089 -4.430 1.00 17.16 C
ATOM 8 O4' G A 2 12.431 46.948 -4.307 1.00 18.71 O
ATOM 9 C3' G A 2 14.295 46.198 -3.082 1.00 13.93 C
ATOM 10 O3' G A 2 15.679 45.906 -3.245 1.00 16.24 O
ATOM 11 C2' G A 2 14.079 47.676 -2.804 1.00 19.45 C
ATOM 12 O2' G A 2 14.882 48.493 -3.625 1.00 12.75 O
ATOM 13 C1' G A 2 12.631 47.847 -3.243 1.00 18.90 C
ATOM 14 N9 G A 2 11.728 47.538 -2.152 1.00 17.16 N
ATOM 15 C8 G A 2 10.968 46.411 -1.936 1.00 18.91 C
ATOM 16 N7 G A 2 10.283 46.474 -0.822 1.00 20.12 N
ATOM 17 C5 G A 2 10.619 47.713 -0.272 1.00 18.04 C
ATOM 18 C6 G A 2 10.207 48.350 0.922 1.00 20.45 C
ATOM 19 O6 G A 2 9.416 47.935 1.775 1.00 22.18 O
ATOM 20 N1 G A 2 10.796 49.608 1.083 1.00 21.48 N
ATOM 21 C2 G A 2 11.697 50.164 0.196 1.00 19.02 C
ATOM 22 N2 G A 2 12.198 51.373 0.489 1.00 16.13 N
ATOM 23 N3 G A 2 12.089 49.571 -0.916 1.00 18.63 N
ATOM 24 C4 G A 2 11.513 48.364 -1.080 1.00 17.74 C
ATOM 25 P G A 3 16.601 45.593 -1.973 1.00 19.47 P
ATOM 26 OP1 G A 3 17.890 45.147 -2.522 1.00 13.70 O
ATOM 27 OP2 G A 3 15.866 44.773 -0.988 1.00 18.61 O
ATOM 28 O5' G A 3 16.753 47.023 -1.283 1.00 17.18 O
TER

ATOM 1 O3' G B 5 9.736 58.686 3.135 1.00 18.99 O
ATOM 2 P G B 6 8.731 58.752 1.898 1.00 19.59 P
ATOM 3 OP1 G B 6 8.628 60.165 1.477 1.00 19.94 O
ATOM 4 OP2 G B 6 7.520 57.995 2.248 1.00 24.06 O
ATOM 5 O5' G B 6 9.529 57.968 0.771 1.00 16.22 O
ATOM 6 C5' G B 6 10.688 58.537 0.180 1.00 16.93 C
ATOM 7 C4' G B 6 11.160 57.648 -0.955 1.00 16.12 C
ATOM 8 O4' G B 6 11.634 56.382 -0.429 1.00 15.62 O
ATOM 9 C3' G B 6 10.090 57.245 -1.956 1.00 14.01 C
ATOM 10 O3' G B 6 9.901 58.283 -2.897 1.00 15.03 O
ATOM 11 C2' G B 6 10.765 56.042 -2.585 1.00 15.24 C
ATOM 12 O2' G B 6 11.818 56.406 -3.442 1.00 14.41 O
ATOM 13 C1' G B 6 11.348 55.358 -1.351 1.00 16.57 C
ATOM 14 N9 G B 6 10.389 54.444 -0.745 1.00 17.76 N
ATOM 15 C8 G B 6 9.669 54.621 0.421 1.00 18.54 C
ATOM 16 N7 G B 6 8.881 53.605 0.684 1.00 21.29 N
ATOM 17 C5 G B 6 9.093 52.717 -0.369 1.00 13.90 C
ATOM 18 C6 G B 6 8.515 51.452 -0.631 1.00 20.13 C
ATOM 19 O6 G B 6 7.669 50.846 0.052 1.00 22.15 O
ATOM 20 N1 G B 6 9.008 50.890 -1.811 1.00 15.40 N
ATOM 21 C2 G B 6 9.936 51.476 -2.639 1.00 16.78 C
ATOM 22 N2 G B 6 10.286 50.793 -3.745 1.00 17.79 N
ATOM 23 N3 G B 6 10.483 52.662 -2.402 1.00 14.84 N
ATOM 24 C4 G B 6 10.013 53.220 -1.257 1.00 16.27 C
ATOM 25 P C B 7 8.459 58.516 -3.532 1.00 16.75 P
ATOM 26 OP1 C B 7 8.548 59.744 -4.356 1.00 14.50 O
ATOM 27 OP2 C B 7 7.441 58.406 -2.467 1.00 15.43 O
ATOM 28 O5' C B 7 8.301 57.268 -4.506 1.00 18.27 O
TER

Atoms:
OP1: (12.624,41.798,-4.635)
OP2: (10.958,42.379,-2.744)
C3': (14.295,46.198,-3.082)
C1': (12.631,47.847,-3.243)
C5': (13.136,44.690,-4.823)
O6: (9.416,47.935,1.775)
O4': (12.431,46.948,-4.307)
C8: (10.968,46.411,-1.936)
C2: (11.697,50.164,0.196)
C6: (10.207,48.350,0.922)
C5: (10.619,47.713,-0.272)
C4: (11.513,48.364,-1.080)
P: (11.661,42.720,-3.996)
C4': (13.591,46.089,-4.430)
C2': (14.079,47.676,-2.804)
O2': (14.882,48.493,-3.625)
N1: (10.796,49.608,1.083)
N2: (12.198,51.373,0.489)
N3: (12.089,49.571,-0.916)
N7: (10.283,46.474,-0.822)
N9: (11.728,47.538,-2.152)
O5': (12.413,44.110,-3.754)
O3': (15.679,45.906,-3.245)
OP1: (8.628,60.165,1.477)
OP2: (7.520,57.995,2.248)
C3': (10.090,57.245,-1.956)
C1': (11.348,55.358,-1.351)
C5': (10.688,58.537,0.180)
O6: (7.669,50.846,0.052)
O4': (11.634,56.382,-0.429)
C8: (9.669,54.621,0.421)
C2: (9.936,51.476,-2.639)
C6: (8.515,51.452,-0.631)
C5: (9.093,52.717,-0.369)
C4: (10.013,53.220,-1.257)
P: (8.731,58.752,1.898)
C4': (11.160,57.648,-0.955)
C2': (10.765,56.042,-2.585)
O2': (11.818,56.406,-3.442)
N1: (9.008,50.890,-1.811)
N2: (10.286,50.793,-3.745)
N3: (10.483,52.662,-2.402)
N7: (8.881,53.605,0.684)
N9: (10.389,54.444,-0.745)
O5': (9.529,57.968,0.771)
O3': (9.901,58.283,-2.897)
Image (generated by PyMOL):
PyMOL image
show in jmol