Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YYO:E11:F1
Extra
PDB:
ATOM 1 O3' C A 10 42.430 4.184 46.439 1.00105.00 O
ATOM 2 P G A 11 42.780 2.675 45.999 1.00113.69 P
ATOM 3 OP1 G A 11 41.515 2.010 45.592 1.00109.58 O
ATOM 4 OP2 G A 11 43.611 2.073 47.073 1.00113.29 O
ATOM 5 O5' G A 11 43.690 2.846 44.702 1.00104.22 O
ATOM 6 C5' G A 11 43.134 3.332 43.485 1.00103.53 C
ATOM 7 C4' G A 11 44.229 3.627 42.491 1.00106.16 C
ATOM 8 O4' G A 11 45.129 4.616 43.053 1.00106.04 O
ATOM 9 C3' G A 11 45.151 2.469 42.149 1.00108.04 C
ATOM 10 O3' G A 11 44.564 1.520 41.250 1.00115.36 O
ATOM 11 C2' G A 11 46.385 3.191 41.621 1.00104.83 C
ATOM 12 O2' G A 11 46.248 3.636 40.284 1.00 96.89 O
ATOM 13 C1' G A 11 46.439 4.405 42.550 1.00 98.03 C
ATOM 14 N9 G A 11 47.349 4.247 43.679 1.00 88.23 N
ATOM 15 C8 G A 11 47.029 3.904 44.973 1.00 87.30 C
ATOM 16 N7 G A 11 48.065 3.880 45.767 1.00 78.35 N
ATOM 17 C5 G A 11 49.133 4.221 44.947 1.00 73.77 C
ATOM 18 C6 G A 11 50.514 4.374 45.247 1.00 67.09 C
ATOM 19 O6 G A 11 51.087 4.240 46.336 1.00 68.19 O
ATOM 20 N1 G A 11 51.246 4.724 44.116 1.00 55.61 N
ATOM 21 C2 G A 11 50.720 4.909 42.858 1.00 63.70 C
ATOM 22 N2 G A 11 51.587 5.244 41.889 1.00 49.78 N
ATOM 23 N3 G A 11 49.435 4.776 42.569 1.00 71.43 N
ATOM 24 C4 G A 11 48.707 4.436 43.653 1.00 77.86 C
TER
ATOM 1 P G B 1 56.983 11.318 40.900 1.00123.17 P
ATOM 2 OP1 G B 1 57.455 12.463 40.080 1.00123.17 O
ATOM 3 OP2 G B 1 57.021 11.410 42.383 1.00123.17 O
ATOM 4 O5' G B 1 55.492 10.968 40.466 1.00116.66 O
ATOM 5 C5' G B 1 55.153 10.792 39.094 1.00108.46 C
ATOM 6 C4' G B 1 53.735 10.295 38.972 1.00106.92 C
ATOM 7 O4' G B 1 53.643 8.960 39.545 1.00105.07 O
ATOM 8 C3' G B 1 52.707 11.095 39.754 1.00107.78 C
ATOM 9 O3' G B 1 52.286 12.265 39.068 1.00113.01 O
ATOM 10 C2' G B 1 51.596 10.073 39.932 1.00104.20 C
ATOM 11 O2' G B 1 50.842 9.858 38.755 1.00 92.94 O
ATOM 12 C1' G B 1 52.420 8.829 40.258 1.00 98.71 C
ATOM 13 N9 G B 1 52.737 8.774 41.682 1.00 91.60 N
ATOM 14 C8 G B 1 53.972 8.946 42.262 1.00 90.34 C
ATOM 15 N7 G B 1 53.945 8.845 43.564 1.00 88.25 N
ATOM 16 C5 G B 1 52.612 8.589 43.862 1.00 75.95 C
ATOM 17 C6 G B 1 51.975 8.381 45.113 1.00 72.57 C
ATOM 18 O6 G B 1 52.479 8.373 46.245 1.00 75.35 O
ATOM 19 N1 G B 1 50.609 8.165 44.958 1.00 64.64 N
ATOM 20 C2 G B 1 49.943 8.152 43.756 1.00 67.82 C
ATOM 21 N2 G B 1 48.621 7.934 43.814 1.00 65.00 N
ATOM 22 N3 G B 1 50.527 8.340 42.584 1.00 57.31 N
ATOM 23 C4 G B 1 51.852 8.549 42.711 1.00 75.81 C
ATOM 24 P C B 2 51.973 13.600 39.907 1.00113.01 P
ATOM 25 OP1 C B 2 52.062 14.759 38.985 1.00113.03 O
ATOM 26 OP2 C B 2 52.824 13.561 41.126 1.00114.07 O
ATOM 27 O5' C B 2 50.456 13.424 40.358 1.00101.55 O
TER
ATOM 2 P G A 11 42.780 2.675 45.999 1.00113.69 P
ATOM 3 OP1 G A 11 41.515 2.010 45.592 1.00109.58 O
ATOM 4 OP2 G A 11 43.611 2.073 47.073 1.00113.29 O
ATOM 5 O5' G A 11 43.690 2.846 44.702 1.00104.22 O
ATOM 6 C5' G A 11 43.134 3.332 43.485 1.00103.53 C
ATOM 7 C4' G A 11 44.229 3.627 42.491 1.00106.16 C
ATOM 8 O4' G A 11 45.129 4.616 43.053 1.00106.04 O
ATOM 9 C3' G A 11 45.151 2.469 42.149 1.00108.04 C
ATOM 10 O3' G A 11 44.564 1.520 41.250 1.00115.36 O
ATOM 11 C2' G A 11 46.385 3.191 41.621 1.00104.83 C
ATOM 12 O2' G A 11 46.248 3.636 40.284 1.00 96.89 O
ATOM 13 C1' G A 11 46.439 4.405 42.550 1.00 98.03 C
ATOM 14 N9 G A 11 47.349 4.247 43.679 1.00 88.23 N
ATOM 15 C8 G A 11 47.029 3.904 44.973 1.00 87.30 C
ATOM 16 N7 G A 11 48.065 3.880 45.767 1.00 78.35 N
ATOM 17 C5 G A 11 49.133 4.221 44.947 1.00 73.77 C
ATOM 18 C6 G A 11 50.514 4.374 45.247 1.00 67.09 C
ATOM 19 O6 G A 11 51.087 4.240 46.336 1.00 68.19 O
ATOM 20 N1 G A 11 51.246 4.724 44.116 1.00 55.61 N
ATOM 21 C2 G A 11 50.720 4.909 42.858 1.00 63.70 C
ATOM 22 N2 G A 11 51.587 5.244 41.889 1.00 49.78 N
ATOM 23 N3 G A 11 49.435 4.776 42.569 1.00 71.43 N
ATOM 24 C4 G A 11 48.707 4.436 43.653 1.00 77.86 C
TER
ATOM 1 P G B 1 56.983 11.318 40.900 1.00123.17 P
ATOM 2 OP1 G B 1 57.455 12.463 40.080 1.00123.17 O
ATOM 3 OP2 G B 1 57.021 11.410 42.383 1.00123.17 O
ATOM 4 O5' G B 1 55.492 10.968 40.466 1.00116.66 O
ATOM 5 C5' G B 1 55.153 10.792 39.094 1.00108.46 C
ATOM 6 C4' G B 1 53.735 10.295 38.972 1.00106.92 C
ATOM 7 O4' G B 1 53.643 8.960 39.545 1.00105.07 O
ATOM 8 C3' G B 1 52.707 11.095 39.754 1.00107.78 C
ATOM 9 O3' G B 1 52.286 12.265 39.068 1.00113.01 O
ATOM 10 C2' G B 1 51.596 10.073 39.932 1.00104.20 C
ATOM 11 O2' G B 1 50.842 9.858 38.755 1.00 92.94 O
ATOM 12 C1' G B 1 52.420 8.829 40.258 1.00 98.71 C
ATOM 13 N9 G B 1 52.737 8.774 41.682 1.00 91.60 N
ATOM 14 C8 G B 1 53.972 8.946 42.262 1.00 90.34 C
ATOM 15 N7 G B 1 53.945 8.845 43.564 1.00 88.25 N
ATOM 16 C5 G B 1 52.612 8.589 43.862 1.00 75.95 C
ATOM 17 C6 G B 1 51.975 8.381 45.113 1.00 72.57 C
ATOM 18 O6 G B 1 52.479 8.373 46.245 1.00 75.35 O
ATOM 19 N1 G B 1 50.609 8.165 44.958 1.00 64.64 N
ATOM 20 C2 G B 1 49.943 8.152 43.756 1.00 67.82 C
ATOM 21 N2 G B 1 48.621 7.934 43.814 1.00 65.00 N
ATOM 22 N3 G B 1 50.527 8.340 42.584 1.00 57.31 N
ATOM 23 C4 G B 1 51.852 8.549 42.711 1.00 75.81 C
ATOM 24 P C B 2 51.973 13.600 39.907 1.00113.01 P
ATOM 25 OP1 C B 2 52.062 14.759 38.985 1.00113.03 O
ATOM 26 OP2 C B 2 52.824 13.561 41.126 1.00114.07 O
ATOM 27 O5' C B 2 50.456 13.424 40.358 1.00101.55 O
TER
Atoms:
OP1: (41.515,2.010,45.592)
OP2: (43.611,2.073,47.073)
C3': (45.151,2.469,42.149)
C1': (46.439,4.405,42.550)
C5': (43.134,3.332,43.485)
O6: (51.087,4.240,46.336)
O4': (45.129,4.616,43.053)
C8: (47.029,3.904,44.973)
C2: (50.720,4.909,42.858)
C6: (50.514,4.374,45.247)
C5: (49.133,4.221,44.947)
C4: (48.707,4.436,43.653)
P: (42.780,2.675,45.999)
C4': (44.229,3.627,42.491)
C2': (46.385,3.191,41.621)
O2': (46.248,3.636,40.284)
N1: (51.246,4.724,44.116)
N2: (51.587,5.244,41.889)
N3: (49.435,4.776,42.569)
N7: (48.065,3.880,45.767)
N9: (47.349,4.247,43.679)
O5': (43.690,2.846,44.702)
O3': (44.564,1.520,41.250)
OP2: (43.611,2.073,47.073)
C3': (45.151,2.469,42.149)
C1': (46.439,4.405,42.550)
C5': (43.134,3.332,43.485)
O6: (51.087,4.240,46.336)
O4': (45.129,4.616,43.053)
C8: (47.029,3.904,44.973)
C2: (50.720,4.909,42.858)
C6: (50.514,4.374,45.247)
C5: (49.133,4.221,44.947)
C4: (48.707,4.436,43.653)
P: (42.780,2.675,45.999)
C4': (44.229,3.627,42.491)
C2': (46.385,3.191,41.621)
O2': (46.248,3.636,40.284)
N1: (51.246,4.724,44.116)
N2: (51.587,5.244,41.889)
N3: (49.435,4.776,42.569)
N7: (48.065,3.880,45.767)
N9: (47.349,4.247,43.679)
O5': (43.690,2.846,44.702)
O3': (44.564,1.520,41.250)
OP1: (57.455,12.463,40.080)
OP2: (57.021,11.410,42.383)
C3': (52.707,11.095,39.754)
C1': (52.420,8.829,40.258)
C5': (55.153,10.792,39.094)
O6: (52.479,8.373,46.245)
O4': (53.643,8.960,39.545)
C8: (53.972,8.946,42.262)
C2: (49.943,8.152,43.756)
C6: (51.975,8.381,45.113)
C5: (52.612,8.589,43.862)
C4: (51.852,8.549,42.711)
P: (56.983,11.318,40.900)
C4': (53.735,10.295,38.972)
C2': (51.596,10.073,39.932)
O2': (50.842,9.858,38.755)
N1: (50.609,8.165,44.958)
N2: (48.621,7.934,43.814)
N3: (50.527,8.340,42.584)
N7: (53.945,8.845,43.564)
N9: (52.737,8.774,41.682)
O5': (55.492,10.968,40.466)
O3': (52.286,12.265,39.068)
OP2: (57.021,11.410,42.383)
C3': (52.707,11.095,39.754)
C1': (52.420,8.829,40.258)
C5': (55.153,10.792,39.094)
O6: (52.479,8.373,46.245)
O4': (53.643,8.960,39.545)
C8: (53.972,8.946,42.262)
C2: (49.943,8.152,43.756)
C6: (51.975,8.381,45.113)
C5: (52.612,8.589,43.862)
C4: (51.852,8.549,42.711)
P: (56.983,11.318,40.900)
C4': (53.735,10.295,38.972)
C2': (51.596,10.073,39.932)
O2': (50.842,9.858,38.755)
N1: (50.609,8.165,44.958)
N2: (48.621,7.934,43.814)
N3: (50.527,8.340,42.584)
N7: (53.945,8.845,43.564)
N9: (52.737,8.774,41.682)
O5': (55.492,10.968,40.466)
O3': (52.286,12.265,39.068)
Image (generated by PyMOL):