ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MWL:A19:B2

Extra

PDB:
ATOM 1 O3' C A 18 25.187 -5.445 16.279 1.00 79.29 O
ATOM 2 P G A 19 26.174 -6.702 16.491 1.00 81.09 P
ATOM 3 OP1 G A 19 27.165 -6.244 17.507 1.00 81.63 O
ATOM 4 OP2 G A 19 26.648 -7.188 15.164 1.00 78.52 O
ATOM 5 O5' G A 19 25.245 -7.826 17.149 1.00 77.84 O
ATOM 6 C5' G A 19 24.706 -7.640 18.457 1.00 76.74 C
ATOM 7 C4' G A 19 23.807 -8.801 18.855 1.00 76.51 C
ATOM 8 O4' G A 19 22.664 -8.830 17.964 1.00 74.47 O
ATOM 9 C3' G A 19 24.413 -10.173 18.643 1.00 76.81 C
ATOM 10 O3' G A 19 25.239 -10.525 19.746 1.00 80.87 O
ATOM 11 C2' G A 19 23.169 -11.053 18.625 1.00 75.05 C
ATOM 12 O2' G A 19 22.626 -11.244 19.922 1.00 74.95 O
ATOM 13 C1' G A 19 22.200 -10.169 17.843 1.00 71.93 C
ATOM 14 N9 G A 19 22.172 -10.524 16.432 1.00 66.91 N
ATOM 15 C8 G A 19 22.767 -9.856 15.386 1.00 65.69 C
ATOM 16 N7 G A 19 22.536 -10.412 14.230 1.00 63.04 N
ATOM 17 C5 G A 19 21.752 -11.513 14.536 1.00 61.99 C
ATOM 18 C6 G A 19 21.195 -12.480 13.694 1.00 60.04 C
ATOM 19 O6 G A 19 21.287 -12.558 12.464 1.00 58.12 O
ATOM 20 N1 G A 19 20.467 -13.426 14.414 1.00 58.56 N
ATOM 21 C2 G A 19 20.302 -13.424 15.778 1.00 61.09 C
ATOM 22 N2 G A 19 19.572 -14.417 16.298 1.00 58.83 N
ATOM 23 N3 G A 19 20.822 -12.512 16.577 1.00 62.05 N
ATOM 24 C4 G A 19 21.527 -11.595 15.892 1.00 62.19 C
ATOM 25 P C A 20 26.417 -11.602 19.533 1.00 83.81 P
ATOM 26 OP1 C A 20 27.121 -11.737 20.840 1.00 82.65 O
ATOM 27 OP2 C A 20 27.183 -11.211 18.320 1.00 83.08 O
ATOM 28 O5' C A 20 25.644 -12.963 19.207 1.00 79.70 O
TER

ATOM 1 O3' C B 1 13.587 -18.050 13.005 1.00 80.66 O
ATOM 2 P G B 2 12.678 -16.726 12.877 1.00 82.52 P
ATOM 3 OP1 G B 2 11.288 -17.155 13.185 1.00 82.81 O
ATOM 4 OP2 G B 2 12.978 -16.057 11.579 1.00 80.20 O
ATOM 5 O5' G B 2 13.159 -15.790 14.072 1.00 77.21 O
ATOM 6 C5' G B 2 12.800 -16.109 15.408 1.00 75.94 C
ATOM 7 C4' G B 2 13.457 -15.158 16.380 1.00 74.39 C
ATOM 8 O4' G B 2 14.900 -15.277 16.229 1.00 73.06 O
ATOM 9 C3' G B 2 13.206 -13.693 16.080 1.00 73.42 C
ATOM 10 O3' G B 2 11.966 -13.276 16.645 1.00 74.91 O
ATOM 11 C2' G B 2 14.364 -13.055 16.829 1.00 72.57 C
ATOM 12 O2' G B 2 14.121 -13.103 18.225 1.00 70.59 O
ATOM 13 C1' G B 2 15.507 -14.007 16.460 1.00 70.28 C
ATOM 14 N9 G B 2 16.151 -13.584 15.219 1.00 64.75 N
ATOM 15 C8 G B 2 15.997 -14.159 13.980 1.00 63.46 C
ATOM 16 N7 G B 2 16.650 -13.533 13.042 1.00 61.37 N
ATOM 17 C5 G B 2 17.284 -12.489 13.702 1.00 58.99 C
ATOM 18 C6 G B 2 18.121 -11.472 13.201 1.00 57.42 C
ATOM 19 O6 G B 2 18.482 -11.288 12.031 1.00 53.51 O
ATOM 20 N1 G B 2 18.545 -10.613 14.212 1.00 55.01 N
ATOM 21 C2 G B 2 18.200 -10.727 15.533 1.00 56.71 C
ATOM 22 N2 G B 2 18.700 -9.808 16.369 1.00 57.65 N
ATOM 23 N3 G B 2 17.417 -11.674 16.010 1.00 56.21 N
ATOM 24 C4 G B 2 16.997 -12.513 15.048 1.00 59.80 C
ATOM 25 P U B 3 11.124 -12.092 15.943 1.00 77.62 P
ATOM 26 OP1 U B 3 9.698 -12.213 16.380 1.00 78.01 O
ATOM 27 OP2 U B 3 11.451 -12.097 14.492 1.00 74.25 O
ATOM 28 O5' U B 3 11.737 -10.766 16.576 1.00 72.56 O
TER

Atoms:
OP1: (27.165,-6.244,17.507)
OP2: (26.648,-7.188,15.164)
C3': (24.413,-10.173,18.643)
C1': (22.200,-10.169,17.843)
C5': (24.706,-7.640,18.457)
O6: (21.287,-12.558,12.464)
O4': (22.664,-8.830,17.964)
C8: (22.767,-9.856,15.386)
C2: (20.302,-13.424,15.778)
C6: (21.195,-12.480,13.694)
C5: (21.752,-11.513,14.536)
C4: (21.527,-11.595,15.892)
P: (26.174,-6.702,16.491)
C4': (23.807,-8.801,18.855)
C2': (23.169,-11.053,18.625)
O2': (22.626,-11.244,19.922)
N1: (20.467,-13.426,14.414)
N2: (19.572,-14.417,16.298)
N3: (20.822,-12.512,16.577)
N7: (22.536,-10.412,14.230)
N9: (22.172,-10.524,16.432)
O5': (25.245,-7.826,17.149)
O3': (25.239,-10.525,19.746)
OP1: (11.288,-17.155,13.185)
OP2: (12.978,-16.057,11.579)
C3': (13.206,-13.693,16.080)
C1': (15.507,-14.007,16.460)
C5': (12.800,-16.109,15.408)
O6: (18.482,-11.288,12.031)
O4': (14.900,-15.277,16.229)
C8: (15.997,-14.159,13.980)
C2: (18.200,-10.727,15.533)
C6: (18.121,-11.472,13.201)
C5: (17.284,-12.489,13.702)
C4: (16.997,-12.513,15.048)
P: (12.678,-16.726,12.877)
C4': (13.457,-15.158,16.380)
C2': (14.364,-13.055,16.829)
O2': (14.121,-13.103,18.225)
N1: (18.545,-10.613,14.212)
N2: (18.700,-9.808,16.369)
N3: (17.417,-11.674,16.010)
N7: (16.650,-13.533,13.042)
N9: (16.151,-13.584,15.219)
O5': (13.159,-15.790,14.072)
O3': (11.966,-13.276,16.645)
Image (generated by PyMOL):
PyMOL image
show in jmol