ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q9A:A1:A26

Extra

PDB:
ATOM 1 P G A 1 23.937 -36.528 -20.091 0.54 22.18 P
ATOM 2 OP1 G A 1 24.179 -37.631 -21.053 0.54 27.07 O
ATOM 3 OP2 G A 1 22.581 -35.919 -20.023 0.54 27.97 O
ATOM 4 O5' G A 1 24.324 -37.036 -18.634 0.54 20.92 O
ATOM 5 C5' G A 1 25.433 -37.935 -18.432 0.54 19.39 C
ATOM 6 C4' G A 1 26.004 -37.682 -17.059 0.54 16.56 C
ATOM 7 O4' G A 1 26.407 -36.283 -16.955 0.54 17.12 O
ATOM 8 C3' G A 1 25.021 -37.876 -15.901 0.54 16.18 C
ATOM 9 O3' G A 1 25.048 -39.239 -15.484 0.54 15.41 O
ATOM 10 C2' G A 1 25.701 -37.028 -14.812 0.54 15.39 C
ATOM 11 O2' G A 1 26.859 -37.688 -14.320 0.54 17.94 O
ATOM 12 C1' G A 1 26.115 -35.838 -15.646 0.54 15.18 C
ATOM 13 N9 G A 1 25.239 -34.690 -15.723 0.54 13.91 N
ATOM 14 C8 G A 1 24.591 -34.221 -16.843 0.54 15.31 C
ATOM 15 N7 G A 1 23.873 -33.165 -16.598 0.54 15.53 N
ATOM 16 C5 G A 1 24.051 -32.920 -15.241 0.54 13.30 C
ATOM 17 C6 G A 1 23.538 -31.903 -14.400 0.54 13.30 C
ATOM 18 O6 G A 1 22.753 -30.966 -14.737 0.54 14.45 O
ATOM 19 N1 G A 1 23.970 -32.010 -13.083 0.54 14.11 N
ATOM 20 C2 G A 1 24.821 -32.996 -12.642 0.54 13.49 C
ATOM 21 N2 G A 1 25.141 -32.955 -11.343 0.54 14.99 N
ATOM 22 N3 G A 1 25.317 -33.946 -13.410 0.54 13.65 N
ATOM 23 C4 G A 1 24.897 -33.848 -14.690 0.54 13.71 C
ATOM 24 P C A 2 23.708 -39.914 -14.924 0.54 16.79 P
ATOM 25 OP1 C A 2 24.087 -41.331 -14.663 0.54 19.95 O
ATOM 26 OP2 C A 2 22.602 -39.581 -15.853 0.54 19.46 O
ATOM 27 O5' C A 2 23.426 -39.196 -13.542 0.54 15.16 O
TER

ATOM 1 O3' U B 25 24.633 -26.323 -7.915 1.00 23.28 O
ATOM 2 P G B 26 25.899 -25.606 -8.617 1.00 24.04 P
ATOM 3 OP1 G B 26 26.785 -25.179 -7.521 1.00 28.21 O
ATOM 4 OP2 G B 26 25.438 -24.592 -9.588 1.00 27.53 O
ATOM 5 N9 G B 26 26.524 -29.271 -12.754 1.00 17.84 N
ATOM 6 C8 G B 26 25.812 -28.099 -12.722 1.00 16.66 C
ATOM 7 N7 G B 26 25.274 -27.814 -13.878 1.00 15.85 N
ATOM 8 C5 G B 26 25.660 -28.862 -14.705 1.00 15.86 C
ATOM 9 C6 G B 26 25.399 -29.122 -16.064 1.00 16.24 C
ATOM 10 O6 G B 26 24.702 -28.383 -16.825 1.00 17.96 O
ATOM 11 N1 G B 26 25.983 -30.300 -16.522 1.00 17.06 N
ATOM 12 C2 G B 26 26.746 -31.138 -15.744 1.00 18.54 C
ATOM 13 N2 G B 26 27.233 -32.235 -16.359 1.00 19.45 N
ATOM 14 N3 G B 26 27.007 -30.917 -14.466 1.00 18.03 N
ATOM 15 C4 G B 26 26.439 -29.776 -14.030 1.00 17.43 C
ATOM 16 O5' G B 26 26.613 -26.777 -9.429 0.45 24.13 O
ATOM 17 C5' G B 26 27.499 -27.694 -8.761 0.45 22.19 C
ATOM 18 C4' G B 26 27.911 -28.814 -9.673 0.45 21.90 C
ATOM 19 O4' G B 26 26.769 -29.277 -10.447 0.45 19.60 O
ATOM 20 C3' G B 26 28.959 -28.481 -10.735 0.45 21.04 C
ATOM 21 O3' G B 26 30.262 -28.519 -10.162 0.45 22.15 O
ATOM 22 C2' G B 26 28.754 -29.616 -11.731 0.45 21.72 C
ATOM 23 O2' G B 26 29.479 -30.787 -11.415 0.45 25.39 O
ATOM 24 C1' G B 26 27.248 -29.869 -11.637 0.45 19.37 C
TER

Atoms:
OP1: (24.179,-37.631,-21.053)
OP2: (22.581,-35.919,-20.023)
C3': (25.021,-37.876,-15.901)
C1': (26.115,-35.838,-15.646)
C5': (25.433,-37.935,-18.432)
O6: (22.753,-30.966,-14.737)
O4': (26.407,-36.283,-16.955)
C8: (24.591,-34.221,-16.843)
C2: (24.821,-32.996,-12.642)
C6: (23.538,-31.903,-14.400)
C5: (24.051,-32.920,-15.241)
C4: (24.897,-33.848,-14.690)
P: (23.937,-36.528,-20.091)
C4': (26.004,-37.682,-17.059)
C2': (25.701,-37.028,-14.812)
O2': (26.859,-37.688,-14.320)
N1: (23.970,-32.010,-13.083)
N2: (25.141,-32.955,-11.343)
N3: (25.317,-33.946,-13.410)
N7: (23.873,-33.165,-16.598)
N9: (25.239,-34.690,-15.723)
O5': (24.324,-37.036,-18.634)
O3': (25.048,-39.239,-15.484)
OP1: (26.785,-25.179,-7.521)
OP2: (25.438,-24.592,-9.588)
C3': (28.959,-28.481,-10.735)
C1': (27.248,-29.869,-11.637)
C5': (27.499,-27.694,-8.761)
O6: (24.702,-28.383,-16.825)
O4': (26.769,-29.277,-10.447)
C8: (25.812,-28.099,-12.722)
C2: (26.746,-31.138,-15.744)
C6: (25.399,-29.122,-16.064)
C5: (25.660,-28.862,-14.705)
C4: (26.439,-29.776,-14.030)
P: (25.899,-25.606,-8.617)
C4': (27.911,-28.814,-9.673)
C2': (28.754,-29.616,-11.731)
O2': (29.479,-30.787,-11.415)
N1: (25.983,-30.300,-16.522)
N2: (27.233,-32.235,-16.359)
N3: (27.007,-30.917,-14.466)
N7: (25.274,-27.814,-13.878)
N9: (26.524,-29.271,-12.754)
O5': (26.613,-26.777,-9.429)
O3': (30.262,-28.519,-10.162)
Image (generated by PyMOL):
PyMOL image
show in jmol