Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I2Q:B28:C2
Extra
PDB:
ATOM 1 O3' C A 27 39.084 -4.663 43.435 1.00 58.46 O
ATOM 2 P G A 28 40.434 -5.240 42.791 1.00 58.07 P
ATOM 3 OP1 G A 28 40.346 -6.712 42.823 1.00 61.90 O
ATOM 4 OP2 G A 28 41.594 -4.566 43.417 1.00 61.90 O
ATOM 5 O5' G A 28 40.344 -4.779 41.275 1.00 58.33 O
ATOM 6 C5' G A 28 39.276 -5.234 40.468 1.00 57.31 C
ATOM 7 C4' G A 28 39.303 -4.557 39.126 1.00 60.28 C
ATOM 8 O4' G A 28 38.998 -3.151 39.303 1.00 64.14 O
ATOM 9 C3' G A 28 40.645 -4.547 38.420 1.00 61.54 C
ATOM 10 O3' G A 28 40.915 -5.752 37.727 1.00 62.21 O
ATOM 11 C2' G A 28 40.486 -3.368 37.480 1.00 61.04 C
ATOM 12 O2' G A 28 39.646 -3.701 36.401 1.00 58.28 O
ATOM 13 C1' G A 28 39.737 -2.384 38.370 1.00 61.93 C
ATOM 14 N9 G A 28 40.667 -1.530 39.099 1.00 61.98 N
ATOM 15 C8 G A 28 41.018 -1.601 40.425 1.00 60.67 C
ATOM 16 N7 G A 28 41.910 -0.709 40.765 1.00 60.15 N
ATOM 17 C5 G A 28 42.152 -0.001 39.595 1.00 59.77 C
ATOM 18 C6 G A 28 43.031 1.086 39.334 1.00 59.32 C
ATOM 19 O6 G A 28 43.782 1.671 40.114 1.00 58.77 O
ATOM 20 N1 G A 28 42.976 1.483 38.004 1.00 58.87 N
ATOM 21 C2 G A 28 42.173 0.920 37.047 1.00 59.50 C
ATOM 22 N2 G A 28 42.272 1.433 35.816 1.00 60.79 N
ATOM 23 N3 G A 28 41.337 -0.077 37.277 1.00 60.29 N
ATOM 24 C4 G A 28 41.385 -0.491 38.561 1.00 61.16 C
ATOM 25 P A A 29 42.424 -6.287 37.658 1.00 63.54 P
ATOM 26 OP1 A A 29 42.394 -7.574 36.941 1.00 64.54 O
ATOM 27 OP2 A A 29 42.955 -6.223 39.042 1.00 62.87 O
ATOM 28 O5' A A 29 43.174 -5.224 36.734 1.00 63.51 O
TER
ATOM 1 O3' C B 1 43.094 8.742 33.311 1.00 59.04 O
ATOM 2 P G B 2 41.625 9.139 33.798 1.00 61.09 P
ATOM 3 OP1 G B 2 41.072 10.112 32.831 1.00 62.18 O
ATOM 4 OP2 G B 2 41.754 9.500 35.227 1.00 60.64 O
ATOM 5 O5' G B 2 40.777 7.792 33.725 1.00 62.34 O
ATOM 6 C5' G B 2 40.492 7.148 32.482 1.00 59.49 C
ATOM 7 C4' G B 2 39.756 5.862 32.745 1.00 59.29 C
ATOM 8 O4' G B 2 40.599 4.998 33.543 1.00 61.73 O
ATOM 9 C3' G B 2 38.494 6.019 33.571 1.00 59.18 C
ATOM 10 O3' G B 2 37.400 6.278 32.710 1.00 59.39 O
ATOM 11 C2' G B 2 38.350 4.650 34.219 1.00 56.54 C
ATOM 12 O2' G B 2 37.805 3.709 33.329 1.00 55.66 O
ATOM 13 C1' G B 2 39.808 4.287 34.478 1.00 59.24 C
ATOM 14 N9 G B 2 40.304 4.622 35.806 1.00 59.91 N
ATOM 15 C8 G B 2 41.154 5.652 36.125 1.00 59.09 C
ATOM 16 N7 G B 2 41.507 5.653 37.381 1.00 59.65 N
ATOM 17 C5 G B 2 40.833 4.573 37.926 1.00 58.39 C
ATOM 18 C6 G B 2 40.842 4.067 39.237 1.00 58.42 C
ATOM 19 O6 G B 2 41.477 4.484 40.210 1.00 59.22 O
ATOM 20 N1 G B 2 40.014 2.955 39.365 1.00 56.06 N
ATOM 21 C2 G B 2 39.279 2.404 38.351 1.00 56.81 C
ATOM 22 N2 G B 2 38.549 1.336 38.665 1.00 58.06 N
ATOM 23 N3 G B 2 39.264 2.866 37.116 1.00 58.28 N
ATOM 24 C4 G B 2 40.063 3.943 36.974 1.00 59.59 C
ATOM 25 P U B 3 36.052 6.890 33.314 1.00 63.04 P
ATOM 26 OP1 U B 3 35.066 7.008 32.211 1.00 62.95 O
ATOM 27 OP2 U B 3 36.445 8.092 34.086 1.00 63.58 O
ATOM 28 O5' U B 3 35.533 5.783 34.337 1.00 63.14 O
TER
ATOM 2 P G A 28 40.434 -5.240 42.791 1.00 58.07 P
ATOM 3 OP1 G A 28 40.346 -6.712 42.823 1.00 61.90 O
ATOM 4 OP2 G A 28 41.594 -4.566 43.417 1.00 61.90 O
ATOM 5 O5' G A 28 40.344 -4.779 41.275 1.00 58.33 O
ATOM 6 C5' G A 28 39.276 -5.234 40.468 1.00 57.31 C
ATOM 7 C4' G A 28 39.303 -4.557 39.126 1.00 60.28 C
ATOM 8 O4' G A 28 38.998 -3.151 39.303 1.00 64.14 O
ATOM 9 C3' G A 28 40.645 -4.547 38.420 1.00 61.54 C
ATOM 10 O3' G A 28 40.915 -5.752 37.727 1.00 62.21 O
ATOM 11 C2' G A 28 40.486 -3.368 37.480 1.00 61.04 C
ATOM 12 O2' G A 28 39.646 -3.701 36.401 1.00 58.28 O
ATOM 13 C1' G A 28 39.737 -2.384 38.370 1.00 61.93 C
ATOM 14 N9 G A 28 40.667 -1.530 39.099 1.00 61.98 N
ATOM 15 C8 G A 28 41.018 -1.601 40.425 1.00 60.67 C
ATOM 16 N7 G A 28 41.910 -0.709 40.765 1.00 60.15 N
ATOM 17 C5 G A 28 42.152 -0.001 39.595 1.00 59.77 C
ATOM 18 C6 G A 28 43.031 1.086 39.334 1.00 59.32 C
ATOM 19 O6 G A 28 43.782 1.671 40.114 1.00 58.77 O
ATOM 20 N1 G A 28 42.976 1.483 38.004 1.00 58.87 N
ATOM 21 C2 G A 28 42.173 0.920 37.047 1.00 59.50 C
ATOM 22 N2 G A 28 42.272 1.433 35.816 1.00 60.79 N
ATOM 23 N3 G A 28 41.337 -0.077 37.277 1.00 60.29 N
ATOM 24 C4 G A 28 41.385 -0.491 38.561 1.00 61.16 C
ATOM 25 P A A 29 42.424 -6.287 37.658 1.00 63.54 P
ATOM 26 OP1 A A 29 42.394 -7.574 36.941 1.00 64.54 O
ATOM 27 OP2 A A 29 42.955 -6.223 39.042 1.00 62.87 O
ATOM 28 O5' A A 29 43.174 -5.224 36.734 1.00 63.51 O
TER
ATOM 1 O3' C B 1 43.094 8.742 33.311 1.00 59.04 O
ATOM 2 P G B 2 41.625 9.139 33.798 1.00 61.09 P
ATOM 3 OP1 G B 2 41.072 10.112 32.831 1.00 62.18 O
ATOM 4 OP2 G B 2 41.754 9.500 35.227 1.00 60.64 O
ATOM 5 O5' G B 2 40.777 7.792 33.725 1.00 62.34 O
ATOM 6 C5' G B 2 40.492 7.148 32.482 1.00 59.49 C
ATOM 7 C4' G B 2 39.756 5.862 32.745 1.00 59.29 C
ATOM 8 O4' G B 2 40.599 4.998 33.543 1.00 61.73 O
ATOM 9 C3' G B 2 38.494 6.019 33.571 1.00 59.18 C
ATOM 10 O3' G B 2 37.400 6.278 32.710 1.00 59.39 O
ATOM 11 C2' G B 2 38.350 4.650 34.219 1.00 56.54 C
ATOM 12 O2' G B 2 37.805 3.709 33.329 1.00 55.66 O
ATOM 13 C1' G B 2 39.808 4.287 34.478 1.00 59.24 C
ATOM 14 N9 G B 2 40.304 4.622 35.806 1.00 59.91 N
ATOM 15 C8 G B 2 41.154 5.652 36.125 1.00 59.09 C
ATOM 16 N7 G B 2 41.507 5.653 37.381 1.00 59.65 N
ATOM 17 C5 G B 2 40.833 4.573 37.926 1.00 58.39 C
ATOM 18 C6 G B 2 40.842 4.067 39.237 1.00 58.42 C
ATOM 19 O6 G B 2 41.477 4.484 40.210 1.00 59.22 O
ATOM 20 N1 G B 2 40.014 2.955 39.365 1.00 56.06 N
ATOM 21 C2 G B 2 39.279 2.404 38.351 1.00 56.81 C
ATOM 22 N2 G B 2 38.549 1.336 38.665 1.00 58.06 N
ATOM 23 N3 G B 2 39.264 2.866 37.116 1.00 58.28 N
ATOM 24 C4 G B 2 40.063 3.943 36.974 1.00 59.59 C
ATOM 25 P U B 3 36.052 6.890 33.314 1.00 63.04 P
ATOM 26 OP1 U B 3 35.066 7.008 32.211 1.00 62.95 O
ATOM 27 OP2 U B 3 36.445 8.092 34.086 1.00 63.58 O
ATOM 28 O5' U B 3 35.533 5.783 34.337 1.00 63.14 O
TER
Atoms:
OP1: (40.346,-6.712,42.823)
OP2: (41.594,-4.566,43.417)
C3': (40.645,-4.547,38.420)
C1': (39.737,-2.384,38.370)
C5': (39.276,-5.234,40.468)
O6: (43.782,1.671,40.114)
O4': (38.998,-3.151,39.303)
C8: (41.018,-1.601,40.425)
C2: (42.173,0.920,37.047)
C6: (43.031,1.086,39.334)
C5: (42.152,-0.001,39.595)
C4: (41.385,-0.491,38.561)
P: (40.434,-5.240,42.791)
C4': (39.303,-4.557,39.126)
C2': (40.486,-3.368,37.480)
O2': (39.646,-3.701,36.401)
N1: (42.976,1.483,38.004)
N2: (42.272,1.433,35.816)
N3: (41.337,-0.077,37.277)
N7: (41.910,-0.709,40.765)
N9: (40.667,-1.530,39.099)
O5': (40.344,-4.779,41.275)
O3': (40.915,-5.752,37.727)
OP2: (41.594,-4.566,43.417)
C3': (40.645,-4.547,38.420)
C1': (39.737,-2.384,38.370)
C5': (39.276,-5.234,40.468)
O6: (43.782,1.671,40.114)
O4': (38.998,-3.151,39.303)
C8: (41.018,-1.601,40.425)
C2: (42.173,0.920,37.047)
C6: (43.031,1.086,39.334)
C5: (42.152,-0.001,39.595)
C4: (41.385,-0.491,38.561)
P: (40.434,-5.240,42.791)
C4': (39.303,-4.557,39.126)
C2': (40.486,-3.368,37.480)
O2': (39.646,-3.701,36.401)
N1: (42.976,1.483,38.004)
N2: (42.272,1.433,35.816)
N3: (41.337,-0.077,37.277)
N7: (41.910,-0.709,40.765)
N9: (40.667,-1.530,39.099)
O5': (40.344,-4.779,41.275)
O3': (40.915,-5.752,37.727)
OP1: (41.072,10.112,32.831)
OP2: (41.754,9.500,35.227)
C3': (38.494,6.019,33.571)
C1': (39.808,4.287,34.478)
C5': (40.492,7.148,32.482)
O6: (41.477,4.484,40.210)
O4': (40.599,4.998,33.543)
C8: (41.154,5.652,36.125)
C2: (39.279,2.404,38.351)
C6: (40.842,4.067,39.237)
C5: (40.833,4.573,37.926)
C4: (40.063,3.943,36.974)
P: (41.625,9.139,33.798)
C4': (39.756,5.862,32.745)
C2': (38.350,4.650,34.219)
O2': (37.805,3.709,33.329)
N1: (40.014,2.955,39.365)
N2: (38.549,1.336,38.665)
N3: (39.264,2.866,37.116)
N7: (41.507,5.653,37.381)
N9: (40.304,4.622,35.806)
O5': (40.777,7.792,33.725)
O3': (37.400,6.278,32.710)
OP2: (41.754,9.500,35.227)
C3': (38.494,6.019,33.571)
C1': (39.808,4.287,34.478)
C5': (40.492,7.148,32.482)
O6: (41.477,4.484,40.210)
O4': (40.599,4.998,33.543)
C8: (41.154,5.652,36.125)
C2: (39.279,2.404,38.351)
C6: (40.842,4.067,39.237)
C5: (40.833,4.573,37.926)
C4: (40.063,3.943,36.974)
P: (41.625,9.139,33.798)
C4': (39.756,5.862,32.745)
C2': (38.350,4.650,34.219)
O2': (37.805,3.709,33.329)
N1: (40.014,2.955,39.365)
N2: (38.549,1.336,38.665)
N3: (39.264,2.866,37.116)
N7: (41.507,5.653,37.381)
N9: (40.304,4.622,35.806)
O5': (40.777,7.792,33.725)
O3': (37.400,6.278,32.710)
Image (generated by PyMOL):