Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3H5X:P4:T5
Extra
PDB:
ATOM 1 O3' C A 3 35.487 -14.572 -8.923 1.00 30.88 O
ATOM 2 P G A 4 35.450 -13.388 -7.865 1.00 33.35 P
ATOM 3 OP1 G A 4 36.696 -13.463 -7.066 1.00 33.24 O
ATOM 4 OP2 G A 4 34.134 -13.369 -7.210 1.00 35.31 O
ATOM 5 O5' G A 4 35.526 -12.067 -8.775 1.00 31.86 O
ATOM 6 C5' G A 4 36.749 -11.719 -9.415 1.00 31.75 C
ATOM 7 C4' G A 4 36.499 -10.544 -10.344 1.00 29.08 C
ATOM 8 O4' G A 4 35.501 -10.908 -11.325 1.00 29.20 O
ATOM 9 C3' G A 4 35.894 -9.325 -9.678 1.00 32.56 C
ATOM 10 O3' G A 4 36.896 -8.591 -8.970 1.00 28.97 O
ATOM 11 C2' G A 4 35.403 -8.609 -10.930 1.00 29.30 C
ATOM 12 O2' G A 4 36.485 -8.070 -11.669 1.00 30.12 O
ATOM 13 C1' G A 4 34.730 -9.769 -11.664 1.00 29.04 C
ATOM 14 N9 G A 4 33.349 -9.907 -11.181 1.00 25.83 N
ATOM 15 C8 G A 4 32.817 -10.855 -10.339 1.00 27.78 C
ATOM 16 N7 G A 4 31.543 -10.671 -10.080 1.00 30.16 N
ATOM 17 C5 G A 4 31.226 -9.508 -10.786 1.00 26.12 C
ATOM 18 C6 G A 4 30.005 -8.810 -10.882 1.00 32.45 C
ATOM 19 O6 G A 4 28.953 -9.124 -10.324 1.00 29.48 O
ATOM 20 N1 G A 4 30.087 -7.680 -11.706 1.00 29.78 N
ATOM 21 C2 G A 4 31.251 -7.276 -12.344 1.00 31.60 C
ATOM 22 N2 G A 4 31.182 -6.161 -13.093 1.00 26.18 N
ATOM 23 N3 G A 4 32.410 -7.928 -12.251 1.00 24.81 N
ATOM 24 C4 G A 4 32.321 -9.026 -11.462 1.00 28.83 C
ATOM 25 P G A 5 36.516 -7.738 -7.672 1.00 29.58 P
ATOM 26 OP1 G A 5 37.748 -7.214 -7.041 1.00 29.21 O
ATOM 27 OP2 G A 5 35.532 -8.542 -6.909 1.00 32.20 O
ATOM 28 O5' G A 5 35.738 -6.508 -8.338 1.00 31.06 O
TER
ATOM 1 O3' C B 4 25.173 -3.278 -17.115 1.00 24.49 O
ATOM 2 P G B 5 25.091 -4.579 -18.033 1.00 26.20 P
ATOM 3 OP1 G B 5 24.649 -4.105 -19.366 1.00 27.08 O
ATOM 4 OP2 G B 5 24.288 -5.628 -17.364 1.00 25.63 O
ATOM 5 O5' G B 5 26.590 -5.116 -18.042 1.00 23.95 O
ATOM 6 C5' G B 5 27.585 -4.315 -18.662 1.00 25.91 C
ATOM 7 C4' G B 5 28.932 -4.987 -18.509 1.00 26.04 C
ATOM 8 O4' G B 5 29.272 -5.065 -17.098 1.00 25.25 O
ATOM 9 C3' G B 5 28.975 -6.435 -18.976 1.00 28.56 C
ATOM 10 O3' G B 5 29.091 -6.485 -20.400 1.00 30.56 O
ATOM 11 C2' G B 5 30.248 -6.873 -18.266 1.00 27.89 C
ATOM 12 O2' G B 5 31.401 -6.344 -18.887 1.00 28.59 O
ATOM 13 C1' G B 5 30.022 -6.243 -16.887 1.00 27.37 C
ATOM 14 N9 G B 5 29.228 -7.117 -16.037 1.00 26.39 N
ATOM 15 C8 G B 5 27.882 -6.996 -15.732 1.00 26.65 C
ATOM 16 N7 G B 5 27.458 -7.948 -14.947 1.00 27.41 N
ATOM 17 C5 G B 5 28.585 -8.737 -14.727 1.00 28.82 C
ATOM 18 C6 G B 5 28.742 -9.912 -13.964 1.00 31.21 C
ATOM 19 O6 G B 5 27.876 -10.497 -13.308 1.00 32.28 O
ATOM 20 N1 G B 5 30.057 -10.402 -14.006 1.00 34.53 N
ATOM 21 C2 G B 5 31.087 -9.824 -14.714 1.00 33.76 C
ATOM 22 N2 G B 5 32.288 -10.442 -14.651 1.00 29.96 N
ATOM 23 N3 G B 5 30.950 -8.715 -15.436 1.00 28.54 N
ATOM 24 C4 G B 5 29.679 -8.237 -15.391 1.00 28.93 C
ATOM 25 P G B 6 28.495 -7.718 -21.235 1.00 31.55 P
ATOM 26 OP1 G B 6 28.814 -7.434 -22.659 1.00 33.91 O
ATOM 27 OP2 G B 6 27.085 -7.899 -20.826 1.00 30.85 O
ATOM 28 O5' G B 6 29.340 -8.975 -20.716 1.00 32.94 O
TER
ATOM 2 P G A 4 35.450 -13.388 -7.865 1.00 33.35 P
ATOM 3 OP1 G A 4 36.696 -13.463 -7.066 1.00 33.24 O
ATOM 4 OP2 G A 4 34.134 -13.369 -7.210 1.00 35.31 O
ATOM 5 O5' G A 4 35.526 -12.067 -8.775 1.00 31.86 O
ATOM 6 C5' G A 4 36.749 -11.719 -9.415 1.00 31.75 C
ATOM 7 C4' G A 4 36.499 -10.544 -10.344 1.00 29.08 C
ATOM 8 O4' G A 4 35.501 -10.908 -11.325 1.00 29.20 O
ATOM 9 C3' G A 4 35.894 -9.325 -9.678 1.00 32.56 C
ATOM 10 O3' G A 4 36.896 -8.591 -8.970 1.00 28.97 O
ATOM 11 C2' G A 4 35.403 -8.609 -10.930 1.00 29.30 C
ATOM 12 O2' G A 4 36.485 -8.070 -11.669 1.00 30.12 O
ATOM 13 C1' G A 4 34.730 -9.769 -11.664 1.00 29.04 C
ATOM 14 N9 G A 4 33.349 -9.907 -11.181 1.00 25.83 N
ATOM 15 C8 G A 4 32.817 -10.855 -10.339 1.00 27.78 C
ATOM 16 N7 G A 4 31.543 -10.671 -10.080 1.00 30.16 N
ATOM 17 C5 G A 4 31.226 -9.508 -10.786 1.00 26.12 C
ATOM 18 C6 G A 4 30.005 -8.810 -10.882 1.00 32.45 C
ATOM 19 O6 G A 4 28.953 -9.124 -10.324 1.00 29.48 O
ATOM 20 N1 G A 4 30.087 -7.680 -11.706 1.00 29.78 N
ATOM 21 C2 G A 4 31.251 -7.276 -12.344 1.00 31.60 C
ATOM 22 N2 G A 4 31.182 -6.161 -13.093 1.00 26.18 N
ATOM 23 N3 G A 4 32.410 -7.928 -12.251 1.00 24.81 N
ATOM 24 C4 G A 4 32.321 -9.026 -11.462 1.00 28.83 C
ATOM 25 P G A 5 36.516 -7.738 -7.672 1.00 29.58 P
ATOM 26 OP1 G A 5 37.748 -7.214 -7.041 1.00 29.21 O
ATOM 27 OP2 G A 5 35.532 -8.542 -6.909 1.00 32.20 O
ATOM 28 O5' G A 5 35.738 -6.508 -8.338 1.00 31.06 O
TER
ATOM 1 O3' C B 4 25.173 -3.278 -17.115 1.00 24.49 O
ATOM 2 P G B 5 25.091 -4.579 -18.033 1.00 26.20 P
ATOM 3 OP1 G B 5 24.649 -4.105 -19.366 1.00 27.08 O
ATOM 4 OP2 G B 5 24.288 -5.628 -17.364 1.00 25.63 O
ATOM 5 O5' G B 5 26.590 -5.116 -18.042 1.00 23.95 O
ATOM 6 C5' G B 5 27.585 -4.315 -18.662 1.00 25.91 C
ATOM 7 C4' G B 5 28.932 -4.987 -18.509 1.00 26.04 C
ATOM 8 O4' G B 5 29.272 -5.065 -17.098 1.00 25.25 O
ATOM 9 C3' G B 5 28.975 -6.435 -18.976 1.00 28.56 C
ATOM 10 O3' G B 5 29.091 -6.485 -20.400 1.00 30.56 O
ATOM 11 C2' G B 5 30.248 -6.873 -18.266 1.00 27.89 C
ATOM 12 O2' G B 5 31.401 -6.344 -18.887 1.00 28.59 O
ATOM 13 C1' G B 5 30.022 -6.243 -16.887 1.00 27.37 C
ATOM 14 N9 G B 5 29.228 -7.117 -16.037 1.00 26.39 N
ATOM 15 C8 G B 5 27.882 -6.996 -15.732 1.00 26.65 C
ATOM 16 N7 G B 5 27.458 -7.948 -14.947 1.00 27.41 N
ATOM 17 C5 G B 5 28.585 -8.737 -14.727 1.00 28.82 C
ATOM 18 C6 G B 5 28.742 -9.912 -13.964 1.00 31.21 C
ATOM 19 O6 G B 5 27.876 -10.497 -13.308 1.00 32.28 O
ATOM 20 N1 G B 5 30.057 -10.402 -14.006 1.00 34.53 N
ATOM 21 C2 G B 5 31.087 -9.824 -14.714 1.00 33.76 C
ATOM 22 N2 G B 5 32.288 -10.442 -14.651 1.00 29.96 N
ATOM 23 N3 G B 5 30.950 -8.715 -15.436 1.00 28.54 N
ATOM 24 C4 G B 5 29.679 -8.237 -15.391 1.00 28.93 C
ATOM 25 P G B 6 28.495 -7.718 -21.235 1.00 31.55 P
ATOM 26 OP1 G B 6 28.814 -7.434 -22.659 1.00 33.91 O
ATOM 27 OP2 G B 6 27.085 -7.899 -20.826 1.00 30.85 O
ATOM 28 O5' G B 6 29.340 -8.975 -20.716 1.00 32.94 O
TER
Atoms:
OP1: (36.696,-13.463,-7.066)
OP2: (34.134,-13.369,-7.210)
C3': (35.894,-9.325,-9.678)
C1': (34.730,-9.769,-11.664)
C5': (36.749,-11.719,-9.415)
O6: (28.953,-9.124,-10.324)
O4': (35.501,-10.908,-11.325)
C8: (32.817,-10.855,-10.339)
C2: (31.251,-7.276,-12.344)
C6: (30.005,-8.810,-10.882)
C5: (31.226,-9.508,-10.786)
C4: (32.321,-9.026,-11.462)
P: (35.450,-13.388,-7.865)
C4': (36.499,-10.544,-10.344)
C2': (35.403,-8.609,-10.930)
O2': (36.485,-8.070,-11.669)
N1: (30.087,-7.680,-11.706)
N2: (31.182,-6.161,-13.093)
N3: (32.410,-7.928,-12.251)
N7: (31.543,-10.671,-10.080)
N9: (33.349,-9.907,-11.181)
O5': (35.526,-12.067,-8.775)
O3': (36.896,-8.591,-8.970)
OP2: (34.134,-13.369,-7.210)
C3': (35.894,-9.325,-9.678)
C1': (34.730,-9.769,-11.664)
C5': (36.749,-11.719,-9.415)
O6: (28.953,-9.124,-10.324)
O4': (35.501,-10.908,-11.325)
C8: (32.817,-10.855,-10.339)
C2: (31.251,-7.276,-12.344)
C6: (30.005,-8.810,-10.882)
C5: (31.226,-9.508,-10.786)
C4: (32.321,-9.026,-11.462)
P: (35.450,-13.388,-7.865)
C4': (36.499,-10.544,-10.344)
C2': (35.403,-8.609,-10.930)
O2': (36.485,-8.070,-11.669)
N1: (30.087,-7.680,-11.706)
N2: (31.182,-6.161,-13.093)
N3: (32.410,-7.928,-12.251)
N7: (31.543,-10.671,-10.080)
N9: (33.349,-9.907,-11.181)
O5': (35.526,-12.067,-8.775)
O3': (36.896,-8.591,-8.970)
OP1: (24.649,-4.105,-19.366)
OP2: (24.288,-5.628,-17.364)
C3': (28.975,-6.435,-18.976)
C1': (30.022,-6.243,-16.887)
C5': (27.585,-4.315,-18.662)
O6: (27.876,-10.497,-13.308)
O4': (29.272,-5.065,-17.098)
C8: (27.882,-6.996,-15.732)
C2: (31.087,-9.824,-14.714)
C6: (28.742,-9.912,-13.964)
C5: (28.585,-8.737,-14.727)
C4: (29.679,-8.237,-15.391)
P: (25.091,-4.579,-18.033)
C4': (28.932,-4.987,-18.509)
C2': (30.248,-6.873,-18.266)
O2': (31.401,-6.344,-18.887)
N1: (30.057,-10.402,-14.006)
N2: (32.288,-10.442,-14.651)
N3: (30.950,-8.715,-15.436)
N7: (27.458,-7.948,-14.947)
N9: (29.228,-7.117,-16.037)
O5': (26.590,-5.116,-18.042)
O3': (29.091,-6.485,-20.400)
OP2: (24.288,-5.628,-17.364)
C3': (28.975,-6.435,-18.976)
C1': (30.022,-6.243,-16.887)
C5': (27.585,-4.315,-18.662)
O6: (27.876,-10.497,-13.308)
O4': (29.272,-5.065,-17.098)
C8: (27.882,-6.996,-15.732)
C2: (31.087,-9.824,-14.714)
C6: (28.742,-9.912,-13.964)
C5: (28.585,-8.737,-14.727)
C4: (29.679,-8.237,-15.391)
P: (25.091,-4.579,-18.033)
C4': (28.932,-4.987,-18.509)
C2': (30.248,-6.873,-18.266)
O2': (31.401,-6.344,-18.887)
N1: (30.057,-10.402,-14.006)
N2: (32.288,-10.442,-14.651)
N3: (30.950,-8.715,-15.436)
N7: (27.458,-7.948,-14.947)
N9: (29.228,-7.117,-16.037)
O5': (26.590,-5.116,-18.042)
O3': (29.091,-6.485,-20.400)
Image (generated by PyMOL):