Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1D:A8:B3
Extra
PDB:
ATOM 1 O3' C A 7 43.557 1.676 19.205 1.00 22.47 O
ATOM 2 P G A 8 44.903 1.419 18.412 1.00 21.06 P
ATOM 3 OP1 G A 8 45.966 1.327 19.449 1.00 27.37 O
ATOM 4 OP2 G A 8 45.066 2.349 17.280 1.00 23.11 O
ATOM 5 O5' G A 8 44.622 -0.043 17.827 1.00 19.35 O
ATOM 6 C5' G A 8 45.016 -0.463 16.549 1.00 17.45 C
ATOM 7 C4' G A 8 44.229 -1.716 16.207 1.00 19.63 C
ATOM 8 O4' G A 8 42.837 -1.352 16.052 1.00 18.45 O
ATOM 9 C3' G A 8 44.588 -2.389 14.899 1.00 16.87 C
ATOM 10 O3' G A 8 45.673 -3.255 15.107 1.00 21.30 O
ATOM 11 C2' G A 8 43.327 -3.197 14.661 1.00 19.28 C
ATOM 12 O2' G A 8 43.255 -4.269 15.590 1.00 19.14 O
ATOM 13 C1' G A 8 42.294 -2.147 15.014 1.00 18.47 C
ATOM 14 N9 G A 8 41.895 -1.248 13.922 1.00 17.18 N
ATOM 15 C8 G A 8 42.118 0.102 13.815 1.00 16.92 C
ATOM 16 N7 G A 8 41.591 0.618 12.728 1.00 17.73 N
ATOM 17 C5 G A 8 41.004 -0.456 12.079 1.00 15.94 C
ATOM 18 C6 G A 8 40.279 -0.511 10.867 1.00 18.53 C
ATOM 19 O6 G A 8 40.023 0.430 10.090 1.00 18.89 O
ATOM 20 N1 G A 8 39.839 -1.801 10.584 1.00 18.44 N
ATOM 21 C2 G A 8 40.061 -2.900 11.380 1.00 19.42 C
ATOM 22 N2 G A 8 39.571 -4.081 10.980 1.00 21.32 N
ATOM 23 N3 G A 8 40.723 -2.853 12.521 1.00 16.85 N
ATOM 24 C4 G A 8 41.164 -1.609 12.808 1.00 17.63 C
ATOM 25 P G A 9 46.622 -3.661 13.895 1.00 26.28 P
ATOM 26 OP1 G A 9 47.769 -4.377 14.481 1.00 30.08 O
ATOM 27 OP2 G A 9 46.844 -2.476 13.034 1.00 28.59 O
ATOM 28 O5' G A 9 45.753 -4.692 13.051 1.00 25.56 O
TER
ATOM 1 P G B 3 31.709 -6.409 8.611 1.00 27.57 P
ATOM 2 OP1 G B 3 30.503 -7.280 8.665 1.00 27.23 O
ATOM 3 OP2 G B 3 31.505 -4.956 8.502 1.00 25.37 O
ATOM 4 O5' G B 3 32.629 -6.669 9.894 1.00 22.16 O
ATOM 5 C5' G B 3 33.032 -8.004 10.175 1.00 24.08 C
ATOM 6 C4' G B 3 33.969 -8.025 11.363 1.00 20.57 C
ATOM 7 O4' G B 3 35.231 -7.439 10.991 1.00 21.89 O
ATOM 8 C3' G B 3 33.506 -7.176 12.528 1.00 20.24 C
ATOM 9 O3' G B 3 32.562 -7.906 13.285 1.00 17.81 O
ATOM 10 C2' G B 3 34.818 -6.996 13.270 1.00 18.41 C
ATOM 11 O2' G B 3 35.238 -8.188 13.910 1.00 20.25 O
ATOM 12 C1' G B 3 35.752 -6.717 12.106 1.00 20.70 C
ATOM 13 N9 G B 3 35.838 -5.292 11.785 1.00 17.46 N
ATOM 14 C8 G B 3 35.332 -4.624 10.696 1.00 17.82 C
ATOM 15 N7 G B 3 35.591 -3.345 10.694 1.00 18.90 N
ATOM 16 C5 G B 3 36.316 -3.135 11.863 1.00 17.06 C
ATOM 17 C6 G B 3 36.860 -1.948 12.388 1.00 19.93 C
ATOM 18 O6 G B 3 36.822 -0.793 11.922 1.00 18.01 O
ATOM 19 N1 G B 3 37.512 -2.182 13.597 1.00 15.00 N
ATOM 20 C2 G B 3 37.617 -3.416 14.198 1.00 17.37 C
ATOM 21 N2 G B 3 38.271 -3.467 15.363 1.00 15.74 N
ATOM 22 N3 G B 3 37.109 -4.533 13.707 1.00 14.90 N
ATOM 23 C4 G B 3 36.468 -4.323 12.538 1.00 17.26 C
ATOM 24 P C B 4 31.366 -7.165 13.980 1.00 18.95 P
ATOM 25 OP1 C B 4 30.514 -8.216 14.584 1.00 20.40 O
ATOM 26 OP2 C B 4 30.766 -6.162 13.060 1.00 23.84 O
ATOM 27 O5' C B 4 32.028 -6.292 15.141 1.00 15.90 O
TER
ATOM 2 P G A 8 44.903 1.419 18.412 1.00 21.06 P
ATOM 3 OP1 G A 8 45.966 1.327 19.449 1.00 27.37 O
ATOM 4 OP2 G A 8 45.066 2.349 17.280 1.00 23.11 O
ATOM 5 O5' G A 8 44.622 -0.043 17.827 1.00 19.35 O
ATOM 6 C5' G A 8 45.016 -0.463 16.549 1.00 17.45 C
ATOM 7 C4' G A 8 44.229 -1.716 16.207 1.00 19.63 C
ATOM 8 O4' G A 8 42.837 -1.352 16.052 1.00 18.45 O
ATOM 9 C3' G A 8 44.588 -2.389 14.899 1.00 16.87 C
ATOM 10 O3' G A 8 45.673 -3.255 15.107 1.00 21.30 O
ATOM 11 C2' G A 8 43.327 -3.197 14.661 1.00 19.28 C
ATOM 12 O2' G A 8 43.255 -4.269 15.590 1.00 19.14 O
ATOM 13 C1' G A 8 42.294 -2.147 15.014 1.00 18.47 C
ATOM 14 N9 G A 8 41.895 -1.248 13.922 1.00 17.18 N
ATOM 15 C8 G A 8 42.118 0.102 13.815 1.00 16.92 C
ATOM 16 N7 G A 8 41.591 0.618 12.728 1.00 17.73 N
ATOM 17 C5 G A 8 41.004 -0.456 12.079 1.00 15.94 C
ATOM 18 C6 G A 8 40.279 -0.511 10.867 1.00 18.53 C
ATOM 19 O6 G A 8 40.023 0.430 10.090 1.00 18.89 O
ATOM 20 N1 G A 8 39.839 -1.801 10.584 1.00 18.44 N
ATOM 21 C2 G A 8 40.061 -2.900 11.380 1.00 19.42 C
ATOM 22 N2 G A 8 39.571 -4.081 10.980 1.00 21.32 N
ATOM 23 N3 G A 8 40.723 -2.853 12.521 1.00 16.85 N
ATOM 24 C4 G A 8 41.164 -1.609 12.808 1.00 17.63 C
ATOM 25 P G A 9 46.622 -3.661 13.895 1.00 26.28 P
ATOM 26 OP1 G A 9 47.769 -4.377 14.481 1.00 30.08 O
ATOM 27 OP2 G A 9 46.844 -2.476 13.034 1.00 28.59 O
ATOM 28 O5' G A 9 45.753 -4.692 13.051 1.00 25.56 O
TER
ATOM 1 P G B 3 31.709 -6.409 8.611 1.00 27.57 P
ATOM 2 OP1 G B 3 30.503 -7.280 8.665 1.00 27.23 O
ATOM 3 OP2 G B 3 31.505 -4.956 8.502 1.00 25.37 O
ATOM 4 O5' G B 3 32.629 -6.669 9.894 1.00 22.16 O
ATOM 5 C5' G B 3 33.032 -8.004 10.175 1.00 24.08 C
ATOM 6 C4' G B 3 33.969 -8.025 11.363 1.00 20.57 C
ATOM 7 O4' G B 3 35.231 -7.439 10.991 1.00 21.89 O
ATOM 8 C3' G B 3 33.506 -7.176 12.528 1.00 20.24 C
ATOM 9 O3' G B 3 32.562 -7.906 13.285 1.00 17.81 O
ATOM 10 C2' G B 3 34.818 -6.996 13.270 1.00 18.41 C
ATOM 11 O2' G B 3 35.238 -8.188 13.910 1.00 20.25 O
ATOM 12 C1' G B 3 35.752 -6.717 12.106 1.00 20.70 C
ATOM 13 N9 G B 3 35.838 -5.292 11.785 1.00 17.46 N
ATOM 14 C8 G B 3 35.332 -4.624 10.696 1.00 17.82 C
ATOM 15 N7 G B 3 35.591 -3.345 10.694 1.00 18.90 N
ATOM 16 C5 G B 3 36.316 -3.135 11.863 1.00 17.06 C
ATOM 17 C6 G B 3 36.860 -1.948 12.388 1.00 19.93 C
ATOM 18 O6 G B 3 36.822 -0.793 11.922 1.00 18.01 O
ATOM 19 N1 G B 3 37.512 -2.182 13.597 1.00 15.00 N
ATOM 20 C2 G B 3 37.617 -3.416 14.198 1.00 17.37 C
ATOM 21 N2 G B 3 38.271 -3.467 15.363 1.00 15.74 N
ATOM 22 N3 G B 3 37.109 -4.533 13.707 1.00 14.90 N
ATOM 23 C4 G B 3 36.468 -4.323 12.538 1.00 17.26 C
ATOM 24 P C B 4 31.366 -7.165 13.980 1.00 18.95 P
ATOM 25 OP1 C B 4 30.514 -8.216 14.584 1.00 20.40 O
ATOM 26 OP2 C B 4 30.766 -6.162 13.060 1.00 23.84 O
ATOM 27 O5' C B 4 32.028 -6.292 15.141 1.00 15.90 O
TER
Atoms:
OP1: (45.966,1.327,19.449)
OP2: (45.066,2.349,17.280)
C3': (44.588,-2.389,14.899)
C1': (42.294,-2.147,15.014)
C5': (45.016,-0.463,16.549)
O6: (40.023,0.430,10.090)
O4': (42.837,-1.352,16.052)
C8: (42.118,0.102,13.815)
C2: (40.061,-2.900,11.380)
C6: (40.279,-0.511,10.867)
C5: (41.004,-0.456,12.079)
C4: (41.164,-1.609,12.808)
P: (44.903,1.419,18.412)
C4': (44.229,-1.716,16.207)
C2': (43.327,-3.197,14.661)
O2': (43.255,-4.269,15.590)
N1: (39.839,-1.801,10.584)
N2: (39.571,-4.081,10.980)
N3: (40.723,-2.853,12.521)
N7: (41.591,0.618,12.728)
N9: (41.895,-1.248,13.922)
O5': (44.622,-0.043,17.827)
O3': (45.673,-3.255,15.107)
OP2: (45.066,2.349,17.280)
C3': (44.588,-2.389,14.899)
C1': (42.294,-2.147,15.014)
C5': (45.016,-0.463,16.549)
O6: (40.023,0.430,10.090)
O4': (42.837,-1.352,16.052)
C8: (42.118,0.102,13.815)
C2: (40.061,-2.900,11.380)
C6: (40.279,-0.511,10.867)
C5: (41.004,-0.456,12.079)
C4: (41.164,-1.609,12.808)
P: (44.903,1.419,18.412)
C4': (44.229,-1.716,16.207)
C2': (43.327,-3.197,14.661)
O2': (43.255,-4.269,15.590)
N1: (39.839,-1.801,10.584)
N2: (39.571,-4.081,10.980)
N3: (40.723,-2.853,12.521)
N7: (41.591,0.618,12.728)
N9: (41.895,-1.248,13.922)
O5': (44.622,-0.043,17.827)
O3': (45.673,-3.255,15.107)
OP1: (30.503,-7.280,8.665)
OP2: (31.505,-4.956,8.502)
C3': (33.506,-7.176,12.528)
C1': (35.752,-6.717,12.106)
C5': (33.032,-8.004,10.175)
O6: (36.822,-0.793,11.922)
O4': (35.231,-7.439,10.991)
C8: (35.332,-4.624,10.696)
C2: (37.617,-3.416,14.198)
C6: (36.860,-1.948,12.388)
C5: (36.316,-3.135,11.863)
C4: (36.468,-4.323,12.538)
P: (31.709,-6.409,8.611)
C4': (33.969,-8.025,11.363)
C2': (34.818,-6.996,13.270)
O2': (35.238,-8.188,13.910)
N1: (37.512,-2.182,13.597)
N2: (38.271,-3.467,15.363)
N3: (37.109,-4.533,13.707)
N7: (35.591,-3.345,10.694)
N9: (35.838,-5.292,11.785)
O5': (32.629,-6.669,9.894)
O3': (32.562,-7.906,13.285)
OP2: (31.505,-4.956,8.502)
C3': (33.506,-7.176,12.528)
C1': (35.752,-6.717,12.106)
C5': (33.032,-8.004,10.175)
O6: (36.822,-0.793,11.922)
O4': (35.231,-7.439,10.991)
C8: (35.332,-4.624,10.696)
C2: (37.617,-3.416,14.198)
C6: (36.860,-1.948,12.388)
C5: (36.316,-3.135,11.863)
C4: (36.468,-4.323,12.538)
P: (31.709,-6.409,8.611)
C4': (33.969,-8.025,11.363)
C2': (34.818,-6.996,13.270)
O2': (35.238,-8.188,13.910)
N1: (37.512,-2.182,13.597)
N2: (38.271,-3.467,15.363)
N3: (37.109,-4.533,13.707)
N7: (35.591,-3.345,10.694)
N9: (35.838,-5.292,11.785)
O5': (32.629,-6.669,9.894)
O3': (32.562,-7.906,13.285)
Image (generated by PyMOL):