Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I2S:B28:C2
Extra
PDB:
ATOM 1 O3' C A 27 38.846 -4.786 43.688 1.00 57.99 O
ATOM 2 P G A 28 40.163 -5.393 42.995 1.00 59.45 P
ATOM 3 OP1 G A 28 39.977 -6.863 42.955 1.00 62.64 O
ATOM 4 OP2 G A 28 41.382 -4.829 43.622 1.00 60.23 O
ATOM 5 O5' G A 28 40.071 -4.867 41.498 1.00 58.60 O
ATOM 6 C5' G A 28 38.998 -5.279 40.670 1.00 56.81 C
ATOM 7 C4' G A 28 39.065 -4.586 39.338 1.00 61.97 C
ATOM 8 O4' G A 28 38.811 -3.167 39.524 1.00 64.63 O
ATOM 9 C3' G A 28 40.423 -4.622 38.661 1.00 63.46 C
ATOM 10 O3' G A 28 40.650 -5.835 37.961 1.00 60.98 O
ATOM 11 C2' G A 28 40.333 -3.425 37.730 1.00 62.10 C
ATOM 12 O2' G A 28 39.517 -3.720 36.621 1.00 64.09 O
ATOM 13 C1' G A 28 39.592 -2.422 38.608 1.00 62.07 C
ATOM 14 N9 G A 28 40.532 -1.597 39.353 1.00 62.41 N
ATOM 15 C8 G A 28 40.920 -1.725 40.666 1.00 63.46 C
ATOM 16 N7 G A 28 41.826 -0.851 41.020 1.00 61.48 N
ATOM 17 C5 G A 28 42.035 -0.095 39.873 1.00 60.14 C
ATOM 18 C6 G A 28 42.911 1.001 39.632 1.00 59.12 C
ATOM 19 O6 G A 28 43.706 1.548 40.414 1.00 55.61 O
ATOM 20 N1 G A 28 42.802 1.457 38.322 1.00 59.25 N
ATOM 21 C2 G A 28 41.960 0.934 37.370 1.00 60.85 C
ATOM 22 N2 G A 28 42.008 1.497 36.159 1.00 64.47 N
ATOM 23 N3 G A 28 41.137 -0.071 37.584 1.00 60.45 N
ATOM 24 C4 G A 28 41.231 -0.537 38.843 1.00 61.57 C
ATOM 25 P A A 29 42.143 -6.423 37.877 1.00 63.91 P
ATOM 26 OP1 A A 29 42.075 -7.708 37.139 1.00 66.56 O
ATOM 27 OP2 A A 29 42.690 -6.394 39.254 1.00 62.53 O
ATOM 28 O5' A A 29 42.925 -5.375 36.966 1.00 63.16 O
TER
ATOM 1 O3' C B 1 42.782 8.586 33.601 1.00 55.20 O
ATOM 2 P G B 2 41.336 9.057 34.117 1.00 60.06 P
ATOM 3 OP1 G B 2 40.839 10.111 33.194 1.00 59.04 O
ATOM 4 OP2 G B 2 41.489 9.341 35.569 1.00 54.10 O
ATOM 5 O5' G B 2 40.390 7.781 33.996 1.00 58.43 O
ATOM 6 C5' G B 2 40.214 7.083 32.764 1.00 55.47 C
ATOM 7 C4' G B 2 39.543 5.769 33.043 1.00 56.25 C
ATOM 8 O4' G B 2 40.421 4.966 33.873 1.00 59.79 O
ATOM 9 C3' G B 2 38.285 5.911 33.876 1.00 56.82 C
ATOM 10 O3' G B 2 37.177 6.153 33.020 1.00 57.08 O
ATOM 11 C2' G B 2 38.183 4.555 34.568 1.00 54.60 C
ATOM 12 O2' G B 2 37.621 3.553 33.760 1.00 51.82 O
ATOM 13 C1' G B 2 39.653 4.223 34.802 1.00 56.24 C
ATOM 14 N9 G B 2 40.164 4.513 36.135 1.00 57.80 N
ATOM 15 C8 G B 2 41.074 5.485 36.473 1.00 57.91 C
ATOM 16 N7 G B 2 41.424 5.442 37.730 1.00 58.86 N
ATOM 17 C5 G B 2 40.683 4.394 38.258 1.00 55.10 C
ATOM 18 C6 G B 2 40.662 3.860 39.565 1.00 53.95 C
ATOM 19 O6 G B 2 41.317 4.216 40.546 1.00 54.84 O
ATOM 20 N1 G B 2 39.774 2.796 39.670 1.00 51.97 N
ATOM 21 C2 G B 2 39.004 2.309 38.641 1.00 53.60 C
ATOM 22 N2 G B 2 38.213 1.277 38.936 1.00 55.01 N
ATOM 23 N3 G B 2 39.014 2.799 37.413 1.00 53.75 N
ATOM 24 C4 G B 2 39.877 3.829 37.292 1.00 56.54 C
ATOM 25 P U B 3 35.839 6.792 33.626 1.00 59.76 P
ATOM 26 OP1 U B 3 34.843 6.928 32.534 1.00 64.77 O
ATOM 27 OP2 U B 3 36.250 7.990 34.400 1.00 64.44 O
ATOM 28 O5' U B 3 35.307 5.699 34.659 1.00 59.98 O
TER
ATOM 2 P G A 28 40.163 -5.393 42.995 1.00 59.45 P
ATOM 3 OP1 G A 28 39.977 -6.863 42.955 1.00 62.64 O
ATOM 4 OP2 G A 28 41.382 -4.829 43.622 1.00 60.23 O
ATOM 5 O5' G A 28 40.071 -4.867 41.498 1.00 58.60 O
ATOM 6 C5' G A 28 38.998 -5.279 40.670 1.00 56.81 C
ATOM 7 C4' G A 28 39.065 -4.586 39.338 1.00 61.97 C
ATOM 8 O4' G A 28 38.811 -3.167 39.524 1.00 64.63 O
ATOM 9 C3' G A 28 40.423 -4.622 38.661 1.00 63.46 C
ATOM 10 O3' G A 28 40.650 -5.835 37.961 1.00 60.98 O
ATOM 11 C2' G A 28 40.333 -3.425 37.730 1.00 62.10 C
ATOM 12 O2' G A 28 39.517 -3.720 36.621 1.00 64.09 O
ATOM 13 C1' G A 28 39.592 -2.422 38.608 1.00 62.07 C
ATOM 14 N9 G A 28 40.532 -1.597 39.353 1.00 62.41 N
ATOM 15 C8 G A 28 40.920 -1.725 40.666 1.00 63.46 C
ATOM 16 N7 G A 28 41.826 -0.851 41.020 1.00 61.48 N
ATOM 17 C5 G A 28 42.035 -0.095 39.873 1.00 60.14 C
ATOM 18 C6 G A 28 42.911 1.001 39.632 1.00 59.12 C
ATOM 19 O6 G A 28 43.706 1.548 40.414 1.00 55.61 O
ATOM 20 N1 G A 28 42.802 1.457 38.322 1.00 59.25 N
ATOM 21 C2 G A 28 41.960 0.934 37.370 1.00 60.85 C
ATOM 22 N2 G A 28 42.008 1.497 36.159 1.00 64.47 N
ATOM 23 N3 G A 28 41.137 -0.071 37.584 1.00 60.45 N
ATOM 24 C4 G A 28 41.231 -0.537 38.843 1.00 61.57 C
ATOM 25 P A A 29 42.143 -6.423 37.877 1.00 63.91 P
ATOM 26 OP1 A A 29 42.075 -7.708 37.139 1.00 66.56 O
ATOM 27 OP2 A A 29 42.690 -6.394 39.254 1.00 62.53 O
ATOM 28 O5' A A 29 42.925 -5.375 36.966 1.00 63.16 O
TER
ATOM 1 O3' C B 1 42.782 8.586 33.601 1.00 55.20 O
ATOM 2 P G B 2 41.336 9.057 34.117 1.00 60.06 P
ATOM 3 OP1 G B 2 40.839 10.111 33.194 1.00 59.04 O
ATOM 4 OP2 G B 2 41.489 9.341 35.569 1.00 54.10 O
ATOM 5 O5' G B 2 40.390 7.781 33.996 1.00 58.43 O
ATOM 6 C5' G B 2 40.214 7.083 32.764 1.00 55.47 C
ATOM 7 C4' G B 2 39.543 5.769 33.043 1.00 56.25 C
ATOM 8 O4' G B 2 40.421 4.966 33.873 1.00 59.79 O
ATOM 9 C3' G B 2 38.285 5.911 33.876 1.00 56.82 C
ATOM 10 O3' G B 2 37.177 6.153 33.020 1.00 57.08 O
ATOM 11 C2' G B 2 38.183 4.555 34.568 1.00 54.60 C
ATOM 12 O2' G B 2 37.621 3.553 33.760 1.00 51.82 O
ATOM 13 C1' G B 2 39.653 4.223 34.802 1.00 56.24 C
ATOM 14 N9 G B 2 40.164 4.513 36.135 1.00 57.80 N
ATOM 15 C8 G B 2 41.074 5.485 36.473 1.00 57.91 C
ATOM 16 N7 G B 2 41.424 5.442 37.730 1.00 58.86 N
ATOM 17 C5 G B 2 40.683 4.394 38.258 1.00 55.10 C
ATOM 18 C6 G B 2 40.662 3.860 39.565 1.00 53.95 C
ATOM 19 O6 G B 2 41.317 4.216 40.546 1.00 54.84 O
ATOM 20 N1 G B 2 39.774 2.796 39.670 1.00 51.97 N
ATOM 21 C2 G B 2 39.004 2.309 38.641 1.00 53.60 C
ATOM 22 N2 G B 2 38.213 1.277 38.936 1.00 55.01 N
ATOM 23 N3 G B 2 39.014 2.799 37.413 1.00 53.75 N
ATOM 24 C4 G B 2 39.877 3.829 37.292 1.00 56.54 C
ATOM 25 P U B 3 35.839 6.792 33.626 1.00 59.76 P
ATOM 26 OP1 U B 3 34.843 6.928 32.534 1.00 64.77 O
ATOM 27 OP2 U B 3 36.250 7.990 34.400 1.00 64.44 O
ATOM 28 O5' U B 3 35.307 5.699 34.659 1.00 59.98 O
TER
Atoms:
OP1: (39.977,-6.863,42.955)
OP2: (41.382,-4.829,43.622)
C3': (40.423,-4.622,38.661)
C1': (39.592,-2.422,38.608)
C5': (38.998,-5.279,40.670)
O6: (43.706,1.548,40.414)
O4': (38.811,-3.167,39.524)
C8: (40.920,-1.725,40.666)
C2: (41.960,0.934,37.370)
C6: (42.911,1.001,39.632)
C5: (42.035,-0.095,39.873)
C4: (41.231,-0.537,38.843)
P: (40.163,-5.393,42.995)
C4': (39.065,-4.586,39.338)
C2': (40.333,-3.425,37.730)
O2': (39.517,-3.720,36.621)
N1: (42.802,1.457,38.322)
N2: (42.008,1.497,36.159)
N3: (41.137,-0.071,37.584)
N7: (41.826,-0.851,41.020)
N9: (40.532,-1.597,39.353)
O5': (40.071,-4.867,41.498)
O3': (40.650,-5.835,37.961)
OP2: (41.382,-4.829,43.622)
C3': (40.423,-4.622,38.661)
C1': (39.592,-2.422,38.608)
C5': (38.998,-5.279,40.670)
O6: (43.706,1.548,40.414)
O4': (38.811,-3.167,39.524)
C8: (40.920,-1.725,40.666)
C2: (41.960,0.934,37.370)
C6: (42.911,1.001,39.632)
C5: (42.035,-0.095,39.873)
C4: (41.231,-0.537,38.843)
P: (40.163,-5.393,42.995)
C4': (39.065,-4.586,39.338)
C2': (40.333,-3.425,37.730)
O2': (39.517,-3.720,36.621)
N1: (42.802,1.457,38.322)
N2: (42.008,1.497,36.159)
N3: (41.137,-0.071,37.584)
N7: (41.826,-0.851,41.020)
N9: (40.532,-1.597,39.353)
O5': (40.071,-4.867,41.498)
O3': (40.650,-5.835,37.961)
OP1: (40.839,10.111,33.194)
OP2: (41.489,9.341,35.569)
C3': (38.285,5.911,33.876)
C1': (39.653,4.223,34.802)
C5': (40.214,7.083,32.764)
O6: (41.317,4.216,40.546)
O4': (40.421,4.966,33.873)
C8: (41.074,5.485,36.473)
C2: (39.004,2.309,38.641)
C6: (40.662,3.860,39.565)
C5: (40.683,4.394,38.258)
C4: (39.877,3.829,37.292)
P: (41.336,9.057,34.117)
C4': (39.543,5.769,33.043)
C2': (38.183,4.555,34.568)
O2': (37.621,3.553,33.760)
N1: (39.774,2.796,39.670)
N2: (38.213,1.277,38.936)
N3: (39.014,2.799,37.413)
N7: (41.424,5.442,37.730)
N9: (40.164,4.513,36.135)
O5': (40.390,7.781,33.996)
O3': (37.177,6.153,33.020)
OP2: (41.489,9.341,35.569)
C3': (38.285,5.911,33.876)
C1': (39.653,4.223,34.802)
C5': (40.214,7.083,32.764)
O6: (41.317,4.216,40.546)
O4': (40.421,4.966,33.873)
C8: (41.074,5.485,36.473)
C2: (39.004,2.309,38.641)
C6: (40.662,3.860,39.565)
C5: (40.683,4.394,38.258)
C4: (39.877,3.829,37.292)
P: (41.336,9.057,34.117)
C4': (39.543,5.769,33.043)
C2': (38.183,4.555,34.568)
O2': (37.621,3.553,33.760)
N1: (39.774,2.796,39.670)
N2: (38.213,1.277,38.936)
N3: (39.014,2.799,37.413)
N7: (41.424,5.442,37.730)
N9: (40.164,4.513,36.135)
O5': (40.390,7.781,33.996)
O3': (37.177,6.153,33.020)
Image (generated by PyMOL):