Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A128:A130
Extra
PDB:
ATOM 1 O3' C A 127 96.713 145.423 13.364 1.00 79.52 O
ATOM 2 P G A 128 96.963 146.945 13.787 1.00 78.41 P
ATOM 3 OP1 G A 128 97.969 147.494 12.834 1.00 78.64 O
ATOM 4 OP2 G A 128 97.245 146.963 15.244 1.00 78.46 O
ATOM 5 O5' G A 128 95.549 147.625 13.502 1.00 76.23 O
ATOM 6 C5' G A 128 95.351 149.034 13.694 1.00 73.73 C
ATOM 7 C4' G A 128 93.881 149.339 13.898 1.00 72.83 C
ATOM 8 O4' G A 128 93.141 149.028 12.697 1.00 73.09 O
ATOM 9 C3' G A 128 93.159 148.480 14.923 1.00 72.11 C
ATOM 10 O3' G A 128 93.449 148.933 16.236 1.00 70.88 O
ATOM 11 C2' G A 128 91.687 148.692 14.558 1.00 72.15 C
ATOM 12 O2' G A 128 91.107 149.865 15.103 1.00 72.60 O
ATOM 13 C1' G A 128 91.773 148.850 13.038 1.00 71.49 C
ATOM 14 N9 G A 128 91.229 147.752 12.248 1.00 69.91 N
ATOM 15 C8 G A 128 90.467 147.876 11.118 1.00 68.84 C
ATOM 16 N7 G A 128 90.136 146.731 10.593 1.00 68.74 N
ATOM 17 C5 G A 128 90.710 145.791 11.431 1.00 69.86 C
ATOM 18 C6 G A 128 90.698 144.374 11.363 1.00 70.51 C
ATOM 19 O6 G A 128 90.177 143.649 10.513 1.00 70.51 O
ATOM 20 N1 G A 128 91.387 143.804 12.424 1.00 71.21 N
ATOM 21 C2 G A 128 92.012 144.505 13.422 1.00 72.49 C
ATOM 22 N2 G A 128 92.592 143.760 14.386 1.00 73.56 N
ATOM 23 N3 G A 128 92.055 145.833 13.483 1.00 72.30 N
ATOM 24 C4 G A 128 91.382 146.403 12.465 1.00 70.07 C
ATOM 25 P C A 129 92.797 148.191 17.493 1.00 69.54 P
ATOM 26 OP1 C A 129 93.495 148.704 18.705 1.00 69.48 O
ATOM 27 OP2 C A 129 92.786 146.729 17.220 1.00 68.94 O
ATOM 28 O5' C A 129 91.285 148.693 17.502 1.00 68.03 O
TER
ATOM 1 O3' C B 129 87.223 148.428 16.245 1.00 62.09 O
ATOM 2 P G B 130 87.085 149.659 15.229 1.00 62.08 P
ATOM 3 OP1 G B 130 88.374 149.881 14.527 1.00 61.06 O
ATOM 4 OP2 G B 130 86.391 150.791 15.889 1.00 61.02 O
ATOM 5 O5' G B 130 86.088 149.098 14.144 1.00 61.85 O
ATOM 6 C5' G B 130 85.982 149.702 12.866 1.00 60.77 C
ATOM 7 C4' G B 130 85.796 148.621 11.847 1.00 60.37 C
ATOM 8 O4' G B 130 87.043 147.904 11.670 1.00 61.00 O
ATOM 9 C3' G B 130 84.834 147.548 12.312 1.00 60.05 C
ATOM 10 O3' G B 130 83.482 147.954 12.140 1.00 58.96 O
ATOM 11 C2' G B 130 85.261 146.345 11.488 1.00 59.78 C
ATOM 12 O2' G B 130 84.793 146.428 10.165 1.00 60.99 O
ATOM 13 C1' G B 130 86.774 146.526 11.473 1.00 60.45 C
ATOM 14 N9 G B 130 87.470 145.757 12.498 1.00 62.11 N
ATOM 15 C8 G B 130 88.215 146.245 13.549 1.00 63.17 C
ATOM 16 N7 G B 130 88.787 145.304 14.252 1.00 63.88 N
ATOM 17 C5 G B 130 88.374 144.123 13.647 1.00 63.52 C
ATOM 18 C6 G B 130 88.690 142.772 13.960 1.00 63.37 C
ATOM 19 O6 G B 130 89.410 142.342 14.876 1.00 63.69 O
ATOM 20 N1 G B 130 88.084 141.889 13.076 1.00 62.48 N
ATOM 21 C2 G B 130 87.283 142.258 12.027 1.00 62.21 C
ATOM 22 N2 G B 130 86.835 141.262 11.257 1.00 60.97 N
ATOM 23 N3 G B 130 86.957 143.512 11.739 1.00 62.85 N
ATOM 24 C4 G B 130 87.545 144.385 12.575 1.00 62.76 C
ATOM 25 P C B 131 82.330 147.266 13.032 1.00 57.67 P
ATOM 26 OP1 C B 131 81.020 147.828 12.598 1.00 58.00 O
ATOM 27 OP2 C B 131 82.703 147.298 14.476 1.00 56.71 O
ATOM 28 O5' C B 131 82.358 145.756 12.536 1.00 55.54 O
TER
ATOM 2 P G A 128 96.963 146.945 13.787 1.00 78.41 P
ATOM 3 OP1 G A 128 97.969 147.494 12.834 1.00 78.64 O
ATOM 4 OP2 G A 128 97.245 146.963 15.244 1.00 78.46 O
ATOM 5 O5' G A 128 95.549 147.625 13.502 1.00 76.23 O
ATOM 6 C5' G A 128 95.351 149.034 13.694 1.00 73.73 C
ATOM 7 C4' G A 128 93.881 149.339 13.898 1.00 72.83 C
ATOM 8 O4' G A 128 93.141 149.028 12.697 1.00 73.09 O
ATOM 9 C3' G A 128 93.159 148.480 14.923 1.00 72.11 C
ATOM 10 O3' G A 128 93.449 148.933 16.236 1.00 70.88 O
ATOM 11 C2' G A 128 91.687 148.692 14.558 1.00 72.15 C
ATOM 12 O2' G A 128 91.107 149.865 15.103 1.00 72.60 O
ATOM 13 C1' G A 128 91.773 148.850 13.038 1.00 71.49 C
ATOM 14 N9 G A 128 91.229 147.752 12.248 1.00 69.91 N
ATOM 15 C8 G A 128 90.467 147.876 11.118 1.00 68.84 C
ATOM 16 N7 G A 128 90.136 146.731 10.593 1.00 68.74 N
ATOM 17 C5 G A 128 90.710 145.791 11.431 1.00 69.86 C
ATOM 18 C6 G A 128 90.698 144.374 11.363 1.00 70.51 C
ATOM 19 O6 G A 128 90.177 143.649 10.513 1.00 70.51 O
ATOM 20 N1 G A 128 91.387 143.804 12.424 1.00 71.21 N
ATOM 21 C2 G A 128 92.012 144.505 13.422 1.00 72.49 C
ATOM 22 N2 G A 128 92.592 143.760 14.386 1.00 73.56 N
ATOM 23 N3 G A 128 92.055 145.833 13.483 1.00 72.30 N
ATOM 24 C4 G A 128 91.382 146.403 12.465 1.00 70.07 C
ATOM 25 P C A 129 92.797 148.191 17.493 1.00 69.54 P
ATOM 26 OP1 C A 129 93.495 148.704 18.705 1.00 69.48 O
ATOM 27 OP2 C A 129 92.786 146.729 17.220 1.00 68.94 O
ATOM 28 O5' C A 129 91.285 148.693 17.502 1.00 68.03 O
TER
ATOM 1 O3' C B 129 87.223 148.428 16.245 1.00 62.09 O
ATOM 2 P G B 130 87.085 149.659 15.229 1.00 62.08 P
ATOM 3 OP1 G B 130 88.374 149.881 14.527 1.00 61.06 O
ATOM 4 OP2 G B 130 86.391 150.791 15.889 1.00 61.02 O
ATOM 5 O5' G B 130 86.088 149.098 14.144 1.00 61.85 O
ATOM 6 C5' G B 130 85.982 149.702 12.866 1.00 60.77 C
ATOM 7 C4' G B 130 85.796 148.621 11.847 1.00 60.37 C
ATOM 8 O4' G B 130 87.043 147.904 11.670 1.00 61.00 O
ATOM 9 C3' G B 130 84.834 147.548 12.312 1.00 60.05 C
ATOM 10 O3' G B 130 83.482 147.954 12.140 1.00 58.96 O
ATOM 11 C2' G B 130 85.261 146.345 11.488 1.00 59.78 C
ATOM 12 O2' G B 130 84.793 146.428 10.165 1.00 60.99 O
ATOM 13 C1' G B 130 86.774 146.526 11.473 1.00 60.45 C
ATOM 14 N9 G B 130 87.470 145.757 12.498 1.00 62.11 N
ATOM 15 C8 G B 130 88.215 146.245 13.549 1.00 63.17 C
ATOM 16 N7 G B 130 88.787 145.304 14.252 1.00 63.88 N
ATOM 17 C5 G B 130 88.374 144.123 13.647 1.00 63.52 C
ATOM 18 C6 G B 130 88.690 142.772 13.960 1.00 63.37 C
ATOM 19 O6 G B 130 89.410 142.342 14.876 1.00 63.69 O
ATOM 20 N1 G B 130 88.084 141.889 13.076 1.00 62.48 N
ATOM 21 C2 G B 130 87.283 142.258 12.027 1.00 62.21 C
ATOM 22 N2 G B 130 86.835 141.262 11.257 1.00 60.97 N
ATOM 23 N3 G B 130 86.957 143.512 11.739 1.00 62.85 N
ATOM 24 C4 G B 130 87.545 144.385 12.575 1.00 62.76 C
ATOM 25 P C B 131 82.330 147.266 13.032 1.00 57.67 P
ATOM 26 OP1 C B 131 81.020 147.828 12.598 1.00 58.00 O
ATOM 27 OP2 C B 131 82.703 147.298 14.476 1.00 56.71 O
ATOM 28 O5' C B 131 82.358 145.756 12.536 1.00 55.54 O
TER
Atoms:
OP1: (97.969,147.494,12.834)
OP2: (97.245,146.963,15.244)
C3': (93.159,148.480,14.923)
C1': (91.773,148.850,13.038)
C5': (95.351,149.034,13.694)
O6: (90.177,143.649,10.513)
O4': (93.141,149.028,12.697)
C8: (90.467,147.876,11.118)
C2: (92.012,144.505,13.422)
C6: (90.698,144.374,11.363)
C5: (90.710,145.791,11.431)
C4: (91.382,146.403,12.465)
P: (96.963,146.945,13.787)
C4': (93.881,149.339,13.898)
C2': (91.687,148.692,14.558)
O2': (91.107,149.865,15.103)
N1: (91.387,143.804,12.424)
N2: (92.592,143.760,14.386)
N3: (92.055,145.833,13.483)
N7: (90.136,146.731,10.593)
N9: (91.229,147.752,12.248)
O5': (95.549,147.625,13.502)
O3': (93.449,148.933,16.236)
OP2: (97.245,146.963,15.244)
C3': (93.159,148.480,14.923)
C1': (91.773,148.850,13.038)
C5': (95.351,149.034,13.694)
O6: (90.177,143.649,10.513)
O4': (93.141,149.028,12.697)
C8: (90.467,147.876,11.118)
C2: (92.012,144.505,13.422)
C6: (90.698,144.374,11.363)
C5: (90.710,145.791,11.431)
C4: (91.382,146.403,12.465)
P: (96.963,146.945,13.787)
C4': (93.881,149.339,13.898)
C2': (91.687,148.692,14.558)
O2': (91.107,149.865,15.103)
N1: (91.387,143.804,12.424)
N2: (92.592,143.760,14.386)
N3: (92.055,145.833,13.483)
N7: (90.136,146.731,10.593)
N9: (91.229,147.752,12.248)
O5': (95.549,147.625,13.502)
O3': (93.449,148.933,16.236)
OP1: (88.374,149.881,14.527)
OP2: (86.391,150.791,15.889)
C3': (84.834,147.548,12.312)
C1': (86.774,146.526,11.473)
C5': (85.982,149.702,12.866)
O6: (89.410,142.342,14.876)
O4': (87.043,147.904,11.670)
C8: (88.215,146.245,13.549)
C2: (87.283,142.258,12.027)
C6: (88.690,142.772,13.960)
C5: (88.374,144.123,13.647)
C4: (87.545,144.385,12.575)
P: (87.085,149.659,15.229)
C4': (85.796,148.621,11.847)
C2': (85.261,146.345,11.488)
O2': (84.793,146.428,10.165)
N1: (88.084,141.889,13.076)
N2: (86.835,141.262,11.257)
N3: (86.957,143.512,11.739)
N7: (88.787,145.304,14.252)
N9: (87.470,145.757,12.498)
O5': (86.088,149.098,14.144)
O3': (83.482,147.954,12.140)
OP2: (86.391,150.791,15.889)
C3': (84.834,147.548,12.312)
C1': (86.774,146.526,11.473)
C5': (85.982,149.702,12.866)
O6: (89.410,142.342,14.876)
O4': (87.043,147.904,11.670)
C8: (88.215,146.245,13.549)
C2: (87.283,142.258,12.027)
C6: (88.690,142.772,13.960)
C5: (88.374,144.123,13.647)
C4: (87.545,144.385,12.575)
P: (87.085,149.659,15.229)
C4': (85.796,148.621,11.847)
C2': (85.261,146.345,11.488)
O2': (84.793,146.428,10.165)
N1: (88.084,141.889,13.076)
N2: (86.835,141.262,11.257)
N3: (86.957,143.512,11.739)
N7: (88.787,145.304,14.252)
N9: (87.470,145.757,12.498)
O5': (86.088,149.098,14.144)
O3': (83.482,147.954,12.140)
Image (generated by PyMOL):