ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1H4S:T15:T55

Extra

PDB:
ATOM 1 O3' C A 14 -4.597 56.737 113.477 1.00 97.40 O
ATOM 2 P G A 15 -4.508 56.718 115.086 1.00 90.54 P
ATOM 3 OP1 G A 15 -4.068 55.367 115.526 1.00 87.09 O
ATOM 4 OP2 G A 15 -5.736 57.328 115.664 1.00 89.72 O
ATOM 5 O5' G A 15 -3.302 57.705 115.365 1.00 83.27 O
ATOM 6 C5' G A 15 -2.066 57.524 114.701 1.00 72.39 C
ATOM 7 C4' G A 15 -1.438 58.858 114.440 1.00 62.37 C
ATOM 8 O4' G A 15 -1.880 59.774 115.459 1.00 60.08 O
ATOM 9 C3' G A 15 0.071 58.798 114.541 1.00 63.41 C
ATOM 10 O3' G A 15 0.728 59.419 113.455 1.00 57.75 O
ATOM 11 C2' G A 15 0.421 59.263 115.952 1.00 64.51 C
ATOM 12 O2' G A 15 1.469 60.205 115.951 1.00 80.62 O
ATOM 13 C1' G A 15 -0.820 60.060 116.341 1.00 59.77 C
ATOM 14 N9 G A 15 -1.298 59.908 117.708 1.00 50.03 N
ATOM 15 C8 G A 15 -2.113 58.928 118.215 1.00 43.19 C
ATOM 16 N7 G A 15 -2.442 59.136 119.460 1.00 45.22 N
ATOM 17 C5 G A 15 -1.782 60.311 119.796 1.00 43.53 C
ATOM 18 C6 G A 15 -1.756 61.044 121.014 1.00 43.59 C
ATOM 19 O6 G A 15 -2.332 60.796 122.080 1.00 44.17 O
ATOM 20 N1 G A 15 -0.954 62.174 120.910 1.00 43.03 N
ATOM 21 C2 G A 15 -0.263 62.549 119.787 1.00 39.97 C
ATOM 22 N2 G A 15 0.467 63.670 119.884 1.00 40.15 N
ATOM 23 N3 G A 15 -0.282 61.879 118.654 1.00 38.02 N
ATOM 24 C4 G A 15 -1.055 60.781 118.730 1.00 42.67 C
ATOM 25 P G A 16 1.992 58.719 112.791 1.00 63.43 P
ATOM 26 OP1 G A 16 2.367 59.596 111.654 1.00 68.94 O
ATOM 27 OP2 G A 16 1.629 57.297 112.547 1.00 65.16 O
ATOM 28 O5' G A 16 3.135 58.795 113.902 1.00 68.44 O
TER

ATOM 1 O3' A B 54 4.283 65.451 120.751 1.00 48.71 O
ATOM 2 P G B 55 3.179 66.577 120.492 1.00 50.63 P
ATOM 3 OP1 G B 55 3.861 67.786 119.959 1.00 51.80 O
ATOM 4 OP2 G B 55 2.384 66.673 121.747 1.00 49.46 O
ATOM 5 O5' G B 55 2.273 65.958 119.331 1.00 54.48 O
ATOM 6 C5' G B 55 2.859 65.393 118.157 1.00 52.66 C
ATOM 7 C4' G B 55 1.973 65.630 116.950 1.00 57.60 C
ATOM 8 O4' G B 55 0.674 65.008 117.145 1.00 58.99 O
ATOM 9 C3' G B 55 1.697 67.115 116.754 1.00 56.63 C
ATOM 10 O3' G B 55 1.752 67.445 115.373 1.00 56.84 O
ATOM 11 C2' G B 55 0.333 67.371 117.394 1.00 54.73 C
ATOM 12 O2' G B 55 -0.466 68.272 116.661 1.00 57.52 O
ATOM 13 C1' G B 55 -0.323 65.998 117.266 1.00 54.15 C
ATOM 14 N9 G B 55 -1.296 65.592 118.269 1.00 54.56 N
ATOM 15 C8 G B 55 -1.551 66.176 119.486 1.00 52.62 C
ATOM 16 N7 G B 55 -2.496 65.569 120.152 1.00 52.37 N
ATOM 17 C5 G B 55 -2.884 64.522 119.325 1.00 54.24 C
ATOM 18 C6 G B 55 -3.866 63.510 119.515 1.00 56.53 C
ATOM 19 O6 G B 55 -4.624 63.341 120.483 1.00 65.93 O
ATOM 20 N1 G B 55 -3.922 62.641 118.427 1.00 49.03 N
ATOM 21 C2 G B 55 -3.143 62.735 117.304 1.00 49.69 C
ATOM 22 N2 G B 55 -3.344 61.801 116.372 1.00 54.44 N
ATOM 23 N3 G B 55 -2.232 63.677 117.111 1.00 51.26 N
ATOM 24 C4 G B 55 -2.156 64.527 118.158 1.00 53.27 C
ATOM 25 P A B 56 2.971 68.284 114.784 1.00 58.04 P
ATOM 26 OP1 A B 56 3.942 67.316 114.215 1.00 51.67 O
ATOM 27 OP2 A B 56 3.409 69.277 115.796 1.00 60.40 O
ATOM 28 O5' A B 56 2.295 69.056 113.576 1.00 61.07 O
TER

Atoms:
OP1: (-4.068,55.367,115.526)
OP2: (-5.736,57.328,115.664)
C3': (0.071,58.798,114.541)
C1': (-0.820,60.060,116.341)
C5': (-2.066,57.524,114.701)
O6: (-2.332,60.796,122.080)
O4': (-1.880,59.774,115.459)
C8: (-2.113,58.928,118.215)
C2: (-0.263,62.549,119.787)
C6: (-1.756,61.044,121.014)
C5: (-1.782,60.311,119.796)
C4: (-1.055,60.781,118.730)
P: (-4.508,56.718,115.086)
C4': (-1.438,58.858,114.440)
C2': (0.421,59.263,115.952)
O2': (1.469,60.205,115.951)
N1: (-0.954,62.174,120.910)
N2: (0.467,63.670,119.884)
N3: (-0.282,61.879,118.654)
N7: (-2.442,59.136,119.460)
N9: (-1.298,59.908,117.708)
O5': (-3.302,57.705,115.365)
O3': (0.728,59.419,113.455)
OP1: (3.861,67.786,119.959)
OP2: (2.384,66.673,121.747)
C3': (1.697,67.115,116.754)
C1': (-0.323,65.998,117.266)
C5': (2.859,65.393,118.157)
O6: (-4.624,63.341,120.483)
O4': (0.674,65.008,117.145)
C8: (-1.551,66.176,119.486)
C2: (-3.143,62.735,117.304)
C6: (-3.866,63.510,119.515)
C5: (-2.884,64.522,119.325)
C4: (-2.156,64.527,118.158)
P: (3.179,66.577,120.492)
C4': (1.973,65.630,116.950)
C2': (0.333,67.371,117.394)
O2': (-0.466,68.272,116.661)
N1: (-3.922,62.641,118.427)
N2: (-3.344,61.801,116.372)
N3: (-2.232,63.677,117.111)
N7: (-2.496,65.569,120.152)
N9: (-1.296,65.592,118.269)
O5': (2.273,65.958,119.331)
O3': (1.752,67.445,115.373)
Image (generated by PyMOL):
PyMOL image
show in jmol