ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2P7E:C15:D2

Extra

PDB:
ATOM 1 O3' C A 14 39.473 -4.698 43.733 1.00 42.63 O
ATOM 2 P G A 15 40.788 -5.284 43.019 1.00 45.71 P
ATOM 3 OP1 G A 15 40.567 -6.752 43.033 1.00 50.39 O
ATOM 4 OP2 G A 15 42.053 -4.722 43.560 1.00 46.32 O
ATOM 5 O5' G A 15 40.660 -4.766 41.521 1.00 41.33 O
ATOM 6 C5' G A 15 39.577 -5.182 40.704 1.00 40.46 C
ATOM 7 C4' G A 15 39.676 -4.547 39.344 1.00 46.74 C
ATOM 8 O4' G A 15 39.406 -3.129 39.475 1.00 51.46 O
ATOM 9 C3' G A 15 41.046 -4.594 38.682 1.00 48.70 C
ATOM 10 O3' G A 15 41.307 -5.840 38.050 1.00 45.35 O
ATOM 11 C2' G A 15 40.908 -3.451 37.690 1.00 47.77 C
ATOM 12 O2' G A 15 40.007 -3.753 36.633 1.00 44.46 O
ATOM 13 C1' G A 15 40.199 -2.418 38.550 1.00 50.34 C
ATOM 14 N9 G A 15 41.160 -1.604 39.272 1.00 48.74 N
ATOM 15 C8 G A 15 41.568 -1.734 40.572 1.00 49.56 C
ATOM 16 N7 G A 15 42.444 -0.834 40.923 1.00 48.62 N
ATOM 17 C5 G A 15 42.619 -0.065 39.781 1.00 48.79 C
ATOM 18 C6 G A 15 43.436 1.072 39.545 1.00 48.23 C
ATOM 19 O6 G A 15 44.167 1.673 40.328 1.00 48.95 O
ATOM 20 N1 G A 15 43.334 1.507 38.232 1.00 45.05 N
ATOM 21 C2 G A 15 42.536 0.932 37.263 1.00 47.29 C
ATOM 22 N2 G A 15 42.611 1.449 36.018 1.00 48.47 N
ATOM 23 N3 G A 15 41.737 -0.089 37.487 1.00 47.71 N
ATOM 24 C4 G A 15 41.837 -0.540 38.754 1.00 49.22 C
ATOM 25 P A A 16 42.823 -6.361 37.867 1.00 49.58 P
ATOM 26 OP1 A A 16 42.682 -7.632 37.092 1.00 55.93 O
ATOM 27 OP2 A A 16 43.569 -6.352 39.156 1.00 50.51 O
ATOM 28 O5' A A 16 43.514 -5.267 36.943 1.00 50.67 O
TER

ATOM 1 O3' C B 1 43.383 8.690 33.569 1.00 45.97 O
ATOM 2 P G B 2 41.930 9.148 34.066 1.00 50.41 P
ATOM 3 OP1 G B 2 41.466 10.160 33.096 1.00 45.29 O
ATOM 4 OP2 G B 2 42.015 9.495 35.484 1.00 45.76 O
ATOM 5 O5' G B 2 41.032 7.838 33.974 1.00 52.72 O
ATOM 6 C5' G B 2 40.880 7.107 32.750 1.00 53.21 C
ATOM 7 C4' G B 2 40.136 5.815 33.023 1.00 56.17 C
ATOM 8 O4' G B 2 40.965 4.967 33.860 1.00 51.09 O
ATOM 9 C3' G B 2 38.856 5.978 33.823 1.00 55.21 C
ATOM 10 O3' G B 2 37.761 6.251 32.946 1.00 53.77 O
ATOM 11 C2' G B 2 38.712 4.609 34.477 1.00 50.28 C
ATOM 12 O2' G B 2 38.200 3.648 33.587 1.00 48.51 O
ATOM 13 C1' G B 2 40.164 4.249 34.774 1.00 50.91 C
ATOM 14 N9 G B 2 40.646 4.550 36.118 1.00 52.86 N
ATOM 15 C8 G B 2 41.489 5.576 36.468 1.00 52.11 C
ATOM 16 N7 G B 2 41.813 5.566 37.735 1.00 51.80 N
ATOM 17 C5 G B 2 41.137 4.473 38.254 1.00 49.40 C
ATOM 18 C6 G B 2 41.124 3.957 39.554 1.00 50.67 C
ATOM 19 O6 G B 2 41.731 4.364 40.531 1.00 53.30 O
ATOM 20 N1 G B 2 40.304 2.841 39.661 1.00 46.50 N
ATOM 21 C2 G B 2 39.592 2.285 38.633 1.00 46.82 C
ATOM 22 N2 G B 2 38.873 1.202 38.930 1.00 46.69 N
ATOM 23 N3 G B 2 39.593 2.757 37.400 1.00 47.44 N
ATOM 24 C4 G B 2 40.389 3.845 37.281 1.00 50.41 C
ATOM 25 P U B 3 36.400 6.899 33.522 1.00 54.96 P
ATOM 26 OP1 U B 3 35.422 6.936 32.399 1.00 55.50 O
ATOM 27 OP2 U B 3 36.722 8.146 34.261 1.00 57.03 O
ATOM 28 O5' U B 3 35.864 5.826 34.563 1.00 55.67 O
TER

Atoms:
OP1: (40.567,-6.752,43.033)
OP2: (42.053,-4.722,43.560)
C3': (41.046,-4.594,38.682)
C1': (40.199,-2.418,38.550)
C5': (39.577,-5.182,40.704)
O6: (44.167,1.673,40.328)
O4': (39.406,-3.129,39.475)
C8: (41.568,-1.734,40.572)
C2: (42.536,0.932,37.263)
C6: (43.436,1.072,39.545)
C5: (42.619,-0.065,39.781)
C4: (41.837,-0.540,38.754)
P: (40.788,-5.284,43.019)
C4': (39.676,-4.547,39.344)
C2': (40.908,-3.451,37.690)
O2': (40.007,-3.753,36.633)
N1: (43.334,1.507,38.232)
N2: (42.611,1.449,36.018)
N3: (41.737,-0.089,37.487)
N7: (42.444,-0.834,40.923)
N9: (41.160,-1.604,39.272)
O5': (40.660,-4.766,41.521)
O3': (41.307,-5.840,38.050)
OP1: (41.466,10.160,33.096)
OP2: (42.015,9.495,35.484)
C3': (38.856,5.978,33.823)
C1': (40.164,4.249,34.774)
C5': (40.880,7.107,32.750)
O6: (41.731,4.364,40.531)
O4': (40.965,4.967,33.860)
C8: (41.489,5.576,36.468)
C2: (39.592,2.285,38.633)
C6: (41.124,3.957,39.554)
C5: (41.137,4.473,38.254)
C4: (40.389,3.845,37.281)
P: (41.930,9.148,34.066)
C4': (40.136,5.815,33.023)
C2': (38.712,4.609,34.477)
O2': (38.200,3.648,33.587)
N1: (40.304,2.841,39.661)
N2: (38.873,1.202,38.930)
N3: (39.593,2.757,37.400)
N7: (41.813,5.566,37.735)
N9: (40.646,4.550,36.118)
O5': (41.032,7.838,33.974)
O3': (37.761,6.251,32.946)
Image (generated by PyMOL):
PyMOL image
show in jmol