Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
480D:A12:A16
Extra
PDB:
ATOM 1 O3' C A 11 -0.110 41.072 -4.076 1.00 15.21 O
ATOM 2 P G A 12 1.031 39.961 -4.238 1.00 14.62 P
ATOM 3 OP1 G A 12 1.271 39.371 -2.903 1.00 17.82 O
ATOM 4 OP2 G A 12 2.160 40.530 -5.003 1.00 15.73 O
ATOM 5 O5' G A 12 0.346 38.853 -5.145 1.00 15.44 O
ATOM 6 C5' G A 12 -0.757 38.090 -4.649 1.00 15.36 C
ATOM 7 C4' G A 12 -1.279 37.188 -5.733 1.00 15.55 C
ATOM 8 O4' G A 12 -1.837 37.992 -6.807 1.00 14.49 O
ATOM 9 C3' G A 12 -0.225 36.371 -6.453 1.00 15.55 C
ATOM 10 O3' G A 12 0.146 35.231 -5.694 1.00 16.61 O
ATOM 11 C2' G A 12 -0.967 35.989 -7.727 1.00 15.80 C
ATOM 12 O2' G A 12 -1.886 34.929 -7.565 1.00 16.16 O
ATOM 13 C1' G A 12 -1.705 37.293 -8.038 1.00 15.14 C
ATOM 14 N9 G A 12 -0.878 38.079 -8.941 1.00 15.90 N
ATOM 15 C8 G A 12 -0.020 39.106 -8.629 1.00 15.81 C
ATOM 16 N7 G A 12 0.620 39.567 -9.669 1.00 16.03 N
ATOM 17 C5 G A 12 0.147 38.804 -10.728 1.00 14.63 C
ATOM 18 C6 G A 12 0.491 38.821 -12.103 1.00 14.57 C
ATOM 19 O6 G A 12 1.301 39.551 -12.685 1.00 16.52 O
ATOM 20 N1 G A 12 -0.218 37.858 -12.820 1.00 14.56 N
ATOM 21 C2 G A 12 -1.134 36.985 -12.285 1.00 14.17 C
ATOM 22 N2 G A 12 -1.710 36.117 -13.136 1.00 12.17 N
ATOM 23 N3 G A 12 -1.462 36.962 -11.003 1.00 14.35 N
ATOM 24 C4 G A 12 -0.785 37.890 -10.292 1.00 15.04 C
ATOM 25 P A A 13 1.697 34.835 -5.562 1.00 17.82 P
ATOM 26 OP1 A A 13 1.725 33.597 -4.742 1.00 19.26 O
ATOM 27 OP2 A A 13 2.486 36.020 -5.139 1.00 18.57 O
ATOM 28 O5' A A 13 2.115 34.466 -7.052 1.00 16.93 O
TER
ATOM 1 O3' A B 15 -5.703 32.322 -17.667 1.00 17.00 O
ATOM 2 P G B 16 -6.262 33.689 -18.292 1.00 17.08 P
ATOM 3 OP1 G B 16 -6.891 33.323 -19.585 1.00 20.64 O
ATOM 4 OP2 G B 16 -5.216 34.731 -18.258 1.00 17.72 O
ATOM 5 O5' G B 16 -7.433 34.099 -17.298 1.00 18.71 O
ATOM 6 C5' G B 16 -7.686 35.471 -16.983 1.00 16.62 C
ATOM 7 C4' G B 16 -8.040 35.603 -15.528 1.00 16.66 C
ATOM 8 O4' G B 16 -6.890 35.228 -14.718 1.00 17.02 O
ATOM 9 C3' G B 16 -8.367 37.013 -15.091 1.00 14.70 C
ATOM 10 O3' G B 16 -9.731 37.296 -15.331 1.00 15.89 O
ATOM 11 C2' G B 16 -8.029 36.974 -13.609 1.00 14.96 C
ATOM 12 O2' G B 16 -9.041 36.392 -12.813 1.00 15.59 O
ATOM 13 C1' G B 16 -6.753 36.131 -13.631 1.00 15.48 C
ATOM 14 N9 G B 16 -5.599 36.980 -13.896 1.00 14.99 N
ATOM 15 C8 G B 16 -4.872 37.062 -15.057 1.00 15.80 C
ATOM 16 N7 G B 16 -3.910 37.943 -14.997 1.00 16.69 N
ATOM 17 C5 G B 16 -4.007 38.470 -13.717 1.00 15.38 C
ATOM 18 C6 G B 16 -3.230 39.474 -13.065 1.00 13.59 C
ATOM 19 O6 G B 16 -2.277 40.123 -13.506 1.00 13.84 O
ATOM 20 N1 G B 16 -3.670 39.691 -11.766 1.00 12.85 N
ATOM 21 C2 G B 16 -4.717 39.038 -11.166 1.00 14.69 C
ATOM 22 N2 G B 16 -4.989 39.390 -9.906 1.00 14.19 N
ATOM 23 N3 G B 16 -5.450 38.107 -11.760 1.00 15.25 N
ATOM 24 C4 G B 16 -5.042 37.878 -13.023 1.00 15.52 C
ATOM 25 P G B 17 -10.119 38.638 -16.106 1.00 15.58 P
ATOM 26 OP1 G B 17 -11.590 38.675 -16.218 1.00 15.54 O
ATOM 27 OP2 G B 17 -9.278 38.719 -17.321 1.00 16.20 O
ATOM 28 O5' G B 17 -9.633 39.791 -15.123 1.00 17.59 O
TER
ATOM 2 P G A 12 1.031 39.961 -4.238 1.00 14.62 P
ATOM 3 OP1 G A 12 1.271 39.371 -2.903 1.00 17.82 O
ATOM 4 OP2 G A 12 2.160 40.530 -5.003 1.00 15.73 O
ATOM 5 O5' G A 12 0.346 38.853 -5.145 1.00 15.44 O
ATOM 6 C5' G A 12 -0.757 38.090 -4.649 1.00 15.36 C
ATOM 7 C4' G A 12 -1.279 37.188 -5.733 1.00 15.55 C
ATOM 8 O4' G A 12 -1.837 37.992 -6.807 1.00 14.49 O
ATOM 9 C3' G A 12 -0.225 36.371 -6.453 1.00 15.55 C
ATOM 10 O3' G A 12 0.146 35.231 -5.694 1.00 16.61 O
ATOM 11 C2' G A 12 -0.967 35.989 -7.727 1.00 15.80 C
ATOM 12 O2' G A 12 -1.886 34.929 -7.565 1.00 16.16 O
ATOM 13 C1' G A 12 -1.705 37.293 -8.038 1.00 15.14 C
ATOM 14 N9 G A 12 -0.878 38.079 -8.941 1.00 15.90 N
ATOM 15 C8 G A 12 -0.020 39.106 -8.629 1.00 15.81 C
ATOM 16 N7 G A 12 0.620 39.567 -9.669 1.00 16.03 N
ATOM 17 C5 G A 12 0.147 38.804 -10.728 1.00 14.63 C
ATOM 18 C6 G A 12 0.491 38.821 -12.103 1.00 14.57 C
ATOM 19 O6 G A 12 1.301 39.551 -12.685 1.00 16.52 O
ATOM 20 N1 G A 12 -0.218 37.858 -12.820 1.00 14.56 N
ATOM 21 C2 G A 12 -1.134 36.985 -12.285 1.00 14.17 C
ATOM 22 N2 G A 12 -1.710 36.117 -13.136 1.00 12.17 N
ATOM 23 N3 G A 12 -1.462 36.962 -11.003 1.00 14.35 N
ATOM 24 C4 G A 12 -0.785 37.890 -10.292 1.00 15.04 C
ATOM 25 P A A 13 1.697 34.835 -5.562 1.00 17.82 P
ATOM 26 OP1 A A 13 1.725 33.597 -4.742 1.00 19.26 O
ATOM 27 OP2 A A 13 2.486 36.020 -5.139 1.00 18.57 O
ATOM 28 O5' A A 13 2.115 34.466 -7.052 1.00 16.93 O
TER
ATOM 1 O3' A B 15 -5.703 32.322 -17.667 1.00 17.00 O
ATOM 2 P G B 16 -6.262 33.689 -18.292 1.00 17.08 P
ATOM 3 OP1 G B 16 -6.891 33.323 -19.585 1.00 20.64 O
ATOM 4 OP2 G B 16 -5.216 34.731 -18.258 1.00 17.72 O
ATOM 5 O5' G B 16 -7.433 34.099 -17.298 1.00 18.71 O
ATOM 6 C5' G B 16 -7.686 35.471 -16.983 1.00 16.62 C
ATOM 7 C4' G B 16 -8.040 35.603 -15.528 1.00 16.66 C
ATOM 8 O4' G B 16 -6.890 35.228 -14.718 1.00 17.02 O
ATOM 9 C3' G B 16 -8.367 37.013 -15.091 1.00 14.70 C
ATOM 10 O3' G B 16 -9.731 37.296 -15.331 1.00 15.89 O
ATOM 11 C2' G B 16 -8.029 36.974 -13.609 1.00 14.96 C
ATOM 12 O2' G B 16 -9.041 36.392 -12.813 1.00 15.59 O
ATOM 13 C1' G B 16 -6.753 36.131 -13.631 1.00 15.48 C
ATOM 14 N9 G B 16 -5.599 36.980 -13.896 1.00 14.99 N
ATOM 15 C8 G B 16 -4.872 37.062 -15.057 1.00 15.80 C
ATOM 16 N7 G B 16 -3.910 37.943 -14.997 1.00 16.69 N
ATOM 17 C5 G B 16 -4.007 38.470 -13.717 1.00 15.38 C
ATOM 18 C6 G B 16 -3.230 39.474 -13.065 1.00 13.59 C
ATOM 19 O6 G B 16 -2.277 40.123 -13.506 1.00 13.84 O
ATOM 20 N1 G B 16 -3.670 39.691 -11.766 1.00 12.85 N
ATOM 21 C2 G B 16 -4.717 39.038 -11.166 1.00 14.69 C
ATOM 22 N2 G B 16 -4.989 39.390 -9.906 1.00 14.19 N
ATOM 23 N3 G B 16 -5.450 38.107 -11.760 1.00 15.25 N
ATOM 24 C4 G B 16 -5.042 37.878 -13.023 1.00 15.52 C
ATOM 25 P G B 17 -10.119 38.638 -16.106 1.00 15.58 P
ATOM 26 OP1 G B 17 -11.590 38.675 -16.218 1.00 15.54 O
ATOM 27 OP2 G B 17 -9.278 38.719 -17.321 1.00 16.20 O
ATOM 28 O5' G B 17 -9.633 39.791 -15.123 1.00 17.59 O
TER
Atoms:
OP1: (1.271,39.371,-2.903)
OP2: (2.160,40.530,-5.003)
C3': (-0.225,36.371,-6.453)
C1': (-1.705,37.293,-8.038)
C5': (-0.757,38.090,-4.649)
O6: (1.301,39.551,-12.685)
O4': (-1.837,37.992,-6.807)
C8: (-0.020,39.106,-8.629)
C2: (-1.134,36.985,-12.285)
C6: (0.491,38.821,-12.103)
C5: (0.147,38.804,-10.728)
C4: (-0.785,37.890,-10.292)
P: (1.031,39.961,-4.238)
C4': (-1.279,37.188,-5.733)
C2': (-0.967,35.989,-7.727)
O2': (-1.886,34.929,-7.565)
N1: (-0.218,37.858,-12.820)
N2: (-1.710,36.117,-13.136)
N3: (-1.462,36.962,-11.003)
N7: (0.620,39.567,-9.669)
N9: (-0.878,38.079,-8.941)
O5': (0.346,38.853,-5.145)
O3': (0.146,35.231,-5.694)
OP2: (2.160,40.530,-5.003)
C3': (-0.225,36.371,-6.453)
C1': (-1.705,37.293,-8.038)
C5': (-0.757,38.090,-4.649)
O6: (1.301,39.551,-12.685)
O4': (-1.837,37.992,-6.807)
C8: (-0.020,39.106,-8.629)
C2: (-1.134,36.985,-12.285)
C6: (0.491,38.821,-12.103)
C5: (0.147,38.804,-10.728)
C4: (-0.785,37.890,-10.292)
P: (1.031,39.961,-4.238)
C4': (-1.279,37.188,-5.733)
C2': (-0.967,35.989,-7.727)
O2': (-1.886,34.929,-7.565)
N1: (-0.218,37.858,-12.820)
N2: (-1.710,36.117,-13.136)
N3: (-1.462,36.962,-11.003)
N7: (0.620,39.567,-9.669)
N9: (-0.878,38.079,-8.941)
O5': (0.346,38.853,-5.145)
O3': (0.146,35.231,-5.694)
OP1: (-6.891,33.323,-19.585)
OP2: (-5.216,34.731,-18.258)
C3': (-8.367,37.013,-15.091)
C1': (-6.753,36.131,-13.631)
C5': (-7.686,35.471,-16.983)
O6: (-2.277,40.123,-13.506)
O4': (-6.890,35.228,-14.718)
C8: (-4.872,37.062,-15.057)
C2: (-4.717,39.038,-11.166)
C6: (-3.230,39.474,-13.065)
C5: (-4.007,38.470,-13.717)
C4: (-5.042,37.878,-13.023)
P: (-6.262,33.689,-18.292)
C4': (-8.040,35.603,-15.528)
C2': (-8.029,36.974,-13.609)
O2': (-9.041,36.392,-12.813)
N1: (-3.670,39.691,-11.766)
N2: (-4.989,39.390,-9.906)
N3: (-5.450,38.107,-11.760)
N7: (-3.910,37.943,-14.997)
N9: (-5.599,36.980,-13.896)
O5': (-7.433,34.099,-17.298)
O3': (-9.731,37.296,-15.331)
OP2: (-5.216,34.731,-18.258)
C3': (-8.367,37.013,-15.091)
C1': (-6.753,36.131,-13.631)
C5': (-7.686,35.471,-16.983)
O6: (-2.277,40.123,-13.506)
O4': (-6.890,35.228,-14.718)
C8: (-4.872,37.062,-15.057)
C2: (-4.717,39.038,-11.166)
C6: (-3.230,39.474,-13.065)
C5: (-4.007,38.470,-13.717)
C4: (-5.042,37.878,-13.023)
P: (-6.262,33.689,-18.292)
C4': (-8.040,35.603,-15.528)
C2': (-8.029,36.974,-13.609)
O2': (-9.041,36.392,-12.813)
N1: (-3.670,39.691,-11.766)
N2: (-4.989,39.390,-9.906)
N3: (-5.450,38.107,-11.760)
N7: (-3.910,37.943,-14.997)
N9: (-5.599,36.980,-13.896)
O5': (-7.433,34.099,-17.298)
O3': (-9.731,37.296,-15.331)
Image (generated by PyMOL):