Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3H5Y:P4:T5
Extra
PDB:
ATOM 1 O3' C A 3 35.180 -14.453 -8.802 1.00 30.15 O
ATOM 2 P G A 4 35.115 -13.279 -7.737 1.00 30.75 P
ATOM 3 OP1 G A 4 36.321 -13.344 -6.881 1.00 28.65 O
ATOM 4 OP2 G A 4 33.778 -13.246 -7.110 1.00 32.61 O
ATOM 5 O5' G A 4 35.221 -11.959 -8.626 1.00 30.18 O
ATOM 6 C5' G A 4 36.385 -11.697 -9.385 1.00 24.72 C
ATOM 7 C4' G A 4 36.162 -10.472 -10.259 1.00 23.30 C
ATOM 8 O4' G A 4 35.162 -10.788 -11.263 1.00 24.87 O
ATOM 9 C3' G A 4 35.605 -9.244 -9.566 1.00 28.26 C
ATOM 10 O3' G A 4 36.613 -8.525 -8.862 1.00 25.16 O
ATOM 11 C2' G A 4 35.081 -8.484 -10.778 1.00 24.21 C
ATOM 12 O2' G A 4 36.103 -7.903 -11.568 1.00 27.99 O
ATOM 13 C1' G A 4 34.408 -9.618 -11.545 1.00 26.29 C
ATOM 14 N9 G A 4 33.042 -9.760 -11.050 1.00 24.89 N
ATOM 15 C8 G A 4 32.527 -10.702 -10.191 1.00 25.81 C
ATOM 16 N7 G A 4 31.260 -10.515 -9.930 1.00 27.61 N
ATOM 17 C5 G A 4 30.926 -9.364 -10.653 1.00 25.33 C
ATOM 18 C6 G A 4 29.696 -8.667 -10.753 1.00 26.93 C
ATOM 19 O6 G A 4 28.641 -8.969 -10.191 1.00 27.82 O
ATOM 20 N1 G A 4 29.771 -7.549 -11.598 1.00 23.20 N
ATOM 21 C2 G A 4 30.939 -7.148 -12.245 1.00 25.03 C
ATOM 22 N2 G A 4 30.877 -6.049 -13.019 1.00 23.58 N
ATOM 23 N3 G A 4 32.098 -7.797 -12.150 1.00 25.37 N
ATOM 24 C4 G A 4 32.009 -8.887 -11.339 1.00 26.40 C
ATOM 25 P G A 5 36.217 -7.693 -7.559 1.00 27.58 P
ATOM 26 OP1 G A 5 37.486 -7.196 -6.972 1.00 28.80 O
ATOM 27 OP2 G A 5 35.252 -8.504 -6.779 1.00 32.82 O
ATOM 28 O5' G A 5 35.412 -6.445 -8.181 1.00 25.45 O
TER
ATOM 1 O3' C B 4 24.835 -3.321 -17.096 1.00 24.23 O
ATOM 2 P G B 5 24.759 -4.617 -18.017 1.00 24.89 P
ATOM 3 OP1 G B 5 24.363 -4.153 -19.370 1.00 26.89 O
ATOM 4 OP2 G B 5 23.942 -5.658 -17.343 1.00 26.29 O
ATOM 5 O5' G B 5 26.258 -5.169 -18.066 1.00 24.25 O
ATOM 6 C5' G B 5 27.261 -4.347 -18.620 1.00 23.92 C
ATOM 7 C4' G B 5 28.611 -5.012 -18.467 1.00 22.73 C
ATOM 8 O4' G B 5 28.971 -5.079 -17.061 1.00 24.65 O
ATOM 9 C3' G B 5 28.650 -6.462 -18.913 1.00 26.30 C
ATOM 10 O3' G B 5 28.789 -6.497 -20.320 1.00 28.55 O
ATOM 11 C2' G B 5 29.915 -6.921 -18.201 1.00 24.64 C
ATOM 12 O2' G B 5 31.059 -6.351 -18.800 1.00 29.17 O
ATOM 13 C1' G B 5 29.690 -6.282 -16.834 1.00 24.21 C
ATOM 14 N9 G B 5 28.871 -7.115 -15.959 1.00 25.69 N
ATOM 15 C8 G B 5 27.524 -6.972 -15.661 1.00 24.45 C
ATOM 16 N7 G B 5 27.083 -7.896 -14.838 1.00 27.57 N
ATOM 17 C5 G B 5 28.209 -8.689 -14.592 1.00 27.05 C
ATOM 18 C6 G B 5 28.376 -9.840 -13.793 1.00 32.36 C
ATOM 19 O6 G B 5 27.532 -10.411 -13.105 1.00 34.26 O
ATOM 20 N1 G B 5 29.688 -10.330 -13.826 1.00 33.22 N
ATOM 21 C2 G B 5 30.707 -9.770 -14.563 1.00 31.93 C
ATOM 22 N2 G B 5 31.900 -10.384 -14.491 1.00 28.73 N
ATOM 23 N3 G B 5 30.571 -8.685 -15.318 1.00 28.63 N
ATOM 24 C4 G B 5 29.303 -8.213 -15.274 1.00 26.36 C
ATOM 25 P G B 6 28.196 -7.731 -21.143 1.00 31.72 P
ATOM 26 OP1 G B 6 28.499 -7.443 -22.567 1.00 32.41 O
ATOM 27 OP2 G B 6 26.795 -7.928 -20.704 1.00 31.55 O
ATOM 28 O5' G B 6 29.045 -8.988 -20.641 1.00 31.24 O
TER
ATOM 2 P G A 4 35.115 -13.279 -7.737 1.00 30.75 P
ATOM 3 OP1 G A 4 36.321 -13.344 -6.881 1.00 28.65 O
ATOM 4 OP2 G A 4 33.778 -13.246 -7.110 1.00 32.61 O
ATOM 5 O5' G A 4 35.221 -11.959 -8.626 1.00 30.18 O
ATOM 6 C5' G A 4 36.385 -11.697 -9.385 1.00 24.72 C
ATOM 7 C4' G A 4 36.162 -10.472 -10.259 1.00 23.30 C
ATOM 8 O4' G A 4 35.162 -10.788 -11.263 1.00 24.87 O
ATOM 9 C3' G A 4 35.605 -9.244 -9.566 1.00 28.26 C
ATOM 10 O3' G A 4 36.613 -8.525 -8.862 1.00 25.16 O
ATOM 11 C2' G A 4 35.081 -8.484 -10.778 1.00 24.21 C
ATOM 12 O2' G A 4 36.103 -7.903 -11.568 1.00 27.99 O
ATOM 13 C1' G A 4 34.408 -9.618 -11.545 1.00 26.29 C
ATOM 14 N9 G A 4 33.042 -9.760 -11.050 1.00 24.89 N
ATOM 15 C8 G A 4 32.527 -10.702 -10.191 1.00 25.81 C
ATOM 16 N7 G A 4 31.260 -10.515 -9.930 1.00 27.61 N
ATOM 17 C5 G A 4 30.926 -9.364 -10.653 1.00 25.33 C
ATOM 18 C6 G A 4 29.696 -8.667 -10.753 1.00 26.93 C
ATOM 19 O6 G A 4 28.641 -8.969 -10.191 1.00 27.82 O
ATOM 20 N1 G A 4 29.771 -7.549 -11.598 1.00 23.20 N
ATOM 21 C2 G A 4 30.939 -7.148 -12.245 1.00 25.03 C
ATOM 22 N2 G A 4 30.877 -6.049 -13.019 1.00 23.58 N
ATOM 23 N3 G A 4 32.098 -7.797 -12.150 1.00 25.37 N
ATOM 24 C4 G A 4 32.009 -8.887 -11.339 1.00 26.40 C
ATOM 25 P G A 5 36.217 -7.693 -7.559 1.00 27.58 P
ATOM 26 OP1 G A 5 37.486 -7.196 -6.972 1.00 28.80 O
ATOM 27 OP2 G A 5 35.252 -8.504 -6.779 1.00 32.82 O
ATOM 28 O5' G A 5 35.412 -6.445 -8.181 1.00 25.45 O
TER
ATOM 1 O3' C B 4 24.835 -3.321 -17.096 1.00 24.23 O
ATOM 2 P G B 5 24.759 -4.617 -18.017 1.00 24.89 P
ATOM 3 OP1 G B 5 24.363 -4.153 -19.370 1.00 26.89 O
ATOM 4 OP2 G B 5 23.942 -5.658 -17.343 1.00 26.29 O
ATOM 5 O5' G B 5 26.258 -5.169 -18.066 1.00 24.25 O
ATOM 6 C5' G B 5 27.261 -4.347 -18.620 1.00 23.92 C
ATOM 7 C4' G B 5 28.611 -5.012 -18.467 1.00 22.73 C
ATOM 8 O4' G B 5 28.971 -5.079 -17.061 1.00 24.65 O
ATOM 9 C3' G B 5 28.650 -6.462 -18.913 1.00 26.30 C
ATOM 10 O3' G B 5 28.789 -6.497 -20.320 1.00 28.55 O
ATOM 11 C2' G B 5 29.915 -6.921 -18.201 1.00 24.64 C
ATOM 12 O2' G B 5 31.059 -6.351 -18.800 1.00 29.17 O
ATOM 13 C1' G B 5 29.690 -6.282 -16.834 1.00 24.21 C
ATOM 14 N9 G B 5 28.871 -7.115 -15.959 1.00 25.69 N
ATOM 15 C8 G B 5 27.524 -6.972 -15.661 1.00 24.45 C
ATOM 16 N7 G B 5 27.083 -7.896 -14.838 1.00 27.57 N
ATOM 17 C5 G B 5 28.209 -8.689 -14.592 1.00 27.05 C
ATOM 18 C6 G B 5 28.376 -9.840 -13.793 1.00 32.36 C
ATOM 19 O6 G B 5 27.532 -10.411 -13.105 1.00 34.26 O
ATOM 20 N1 G B 5 29.688 -10.330 -13.826 1.00 33.22 N
ATOM 21 C2 G B 5 30.707 -9.770 -14.563 1.00 31.93 C
ATOM 22 N2 G B 5 31.900 -10.384 -14.491 1.00 28.73 N
ATOM 23 N3 G B 5 30.571 -8.685 -15.318 1.00 28.63 N
ATOM 24 C4 G B 5 29.303 -8.213 -15.274 1.00 26.36 C
ATOM 25 P G B 6 28.196 -7.731 -21.143 1.00 31.72 P
ATOM 26 OP1 G B 6 28.499 -7.443 -22.567 1.00 32.41 O
ATOM 27 OP2 G B 6 26.795 -7.928 -20.704 1.00 31.55 O
ATOM 28 O5' G B 6 29.045 -8.988 -20.641 1.00 31.24 O
TER
Atoms:
OP1: (36.321,-13.344,-6.881)
OP2: (33.778,-13.246,-7.110)
C3': (35.605,-9.244,-9.566)
C1': (34.408,-9.618,-11.545)
C5': (36.385,-11.697,-9.385)
O6: (28.641,-8.969,-10.191)
O4': (35.162,-10.788,-11.263)
C8: (32.527,-10.702,-10.191)
C2: (30.939,-7.148,-12.245)
C6: (29.696,-8.667,-10.753)
C5: (30.926,-9.364,-10.653)
C4: (32.009,-8.887,-11.339)
P: (35.115,-13.279,-7.737)
C4': (36.162,-10.472,-10.259)
C2': (35.081,-8.484,-10.778)
O2': (36.103,-7.903,-11.568)
N1: (29.771,-7.549,-11.598)
N2: (30.877,-6.049,-13.019)
N3: (32.098,-7.797,-12.150)
N7: (31.260,-10.515,-9.930)
N9: (33.042,-9.760,-11.050)
O5': (35.221,-11.959,-8.626)
O3': (36.613,-8.525,-8.862)
OP2: (33.778,-13.246,-7.110)
C3': (35.605,-9.244,-9.566)
C1': (34.408,-9.618,-11.545)
C5': (36.385,-11.697,-9.385)
O6: (28.641,-8.969,-10.191)
O4': (35.162,-10.788,-11.263)
C8: (32.527,-10.702,-10.191)
C2: (30.939,-7.148,-12.245)
C6: (29.696,-8.667,-10.753)
C5: (30.926,-9.364,-10.653)
C4: (32.009,-8.887,-11.339)
P: (35.115,-13.279,-7.737)
C4': (36.162,-10.472,-10.259)
C2': (35.081,-8.484,-10.778)
O2': (36.103,-7.903,-11.568)
N1: (29.771,-7.549,-11.598)
N2: (30.877,-6.049,-13.019)
N3: (32.098,-7.797,-12.150)
N7: (31.260,-10.515,-9.930)
N9: (33.042,-9.760,-11.050)
O5': (35.221,-11.959,-8.626)
O3': (36.613,-8.525,-8.862)
OP1: (24.363,-4.153,-19.370)
OP2: (23.942,-5.658,-17.343)
C3': (28.650,-6.462,-18.913)
C1': (29.690,-6.282,-16.834)
C5': (27.261,-4.347,-18.620)
O6: (27.532,-10.411,-13.105)
O4': (28.971,-5.079,-17.061)
C8: (27.524,-6.972,-15.661)
C2: (30.707,-9.770,-14.563)
C6: (28.376,-9.840,-13.793)
C5: (28.209,-8.689,-14.592)
C4: (29.303,-8.213,-15.274)
P: (24.759,-4.617,-18.017)
C4': (28.611,-5.012,-18.467)
C2': (29.915,-6.921,-18.201)
O2': (31.059,-6.351,-18.800)
N1: (29.688,-10.330,-13.826)
N2: (31.900,-10.384,-14.491)
N3: (30.571,-8.685,-15.318)
N7: (27.083,-7.896,-14.838)
N9: (28.871,-7.115,-15.959)
O5': (26.258,-5.169,-18.066)
O3': (28.789,-6.497,-20.320)
OP2: (23.942,-5.658,-17.343)
C3': (28.650,-6.462,-18.913)
C1': (29.690,-6.282,-16.834)
C5': (27.261,-4.347,-18.620)
O6: (27.532,-10.411,-13.105)
O4': (28.971,-5.079,-17.061)
C8: (27.524,-6.972,-15.661)
C2: (30.707,-9.770,-14.563)
C6: (28.376,-9.840,-13.793)
C5: (28.209,-8.689,-14.592)
C4: (29.303,-8.213,-15.274)
P: (24.759,-4.617,-18.017)
C4': (28.611,-5.012,-18.467)
C2': (29.915,-6.921,-18.201)
O2': (31.059,-6.351,-18.800)
N1: (29.688,-10.330,-13.826)
N2: (31.900,-10.384,-14.491)
N3: (30.571,-8.685,-15.318)
N7: (27.083,-7.896,-14.838)
N9: (28.871,-7.115,-15.959)
O5': (26.258,-5.169,-18.066)
O3': (28.789,-6.497,-20.320)
Image (generated by PyMOL):