Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A56:A25
Extra
PDB:
ATOM 1 O3' U A 55 10.179 -22.840 30.871 1.00 55.76 O
ATOM 2 P A A 56 10.857 -24.118 31.558 1.00 63.18 P
ATOM 3 OP1 A A 56 10.556 -23.773 32.998 1.00 55.20 O
ATOM 4 OP2 A A 56 12.210 -24.281 30.959 1.00 54.49 O
ATOM 5 O5' A A 56 9.977 -25.408 31.127 1.00 58.51 O
ATOM 6 C5' A A 56 10.571 -26.673 30.917 1.00 53.64 C
ATOM 7 C4' A A 56 9.583 -27.710 30.386 1.00 53.41 C
ATOM 8 O4' A A 56 8.440 -28.012 31.241 1.00 55.89 O
ATOM 9 C3' A A 56 8.980 -27.232 29.093 1.00 51.81 C
ATOM 10 O3' A A 56 9.781 -27.755 28.073 1.00 54.76 O
ATOM 11 C2' A A 56 7.640 -27.930 29.064 1.00 51.64 C
ATOM 12 O2' A A 56 7.811 -29.296 28.737 1.00 51.40 O
ATOM 13 C1' A A 56 7.238 -27.913 30.495 1.00 47.51 C
ATOM 14 N9 A A 56 6.483 -26.794 31.043 1.00 48.61 N
ATOM 15 C8 A A 56 6.952 -25.769 31.796 1.00 42.88 C
ATOM 16 N7 A A 56 5.971 -25.035 32.262 1.00 46.50 N
ATOM 17 C5 A A 56 4.794 -25.585 31.791 1.00 42.77 C
ATOM 18 C6 A A 56 3.416 -25.259 31.930 1.00 44.75 C
ATOM 19 N6 A A 56 2.919 -24.212 32.610 1.00 40.10 N
ATOM 20 N1 A A 56 2.520 -26.074 31.342 1.00 39.52 N
ATOM 21 C2 A A 56 2.983 -27.119 30.675 1.00 40.60 C
ATOM 22 N3 A A 56 4.228 -27.530 30.470 1.00 46.08 N
ATOM 23 C4 A A 56 5.098 -26.681 31.044 1.00 43.48 C
ATOM 24 P A A 57 9.862 -26.886 26.760 1.00 50.81 P
ATOM 25 OP1 A A 57 10.709 -27.562 25.724 1.00 45.20 O
ATOM 26 OP2 A A 57 10.244 -25.564 27.275 1.00 49.20 O
ATOM 27 O5' A A 57 8.311 -26.883 26.263 1.00 49.84 O
TER
ATOM 1 O3' G B 24 -1.243 -23.081 37.460 1.00 43.60 O
ATOM 2 P C B 25 -1.531 -21.595 36.866 1.00 53.89 P
ATOM 3 OP1 C B 25 -0.884 -20.561 37.726 1.00 54.99 O
ATOM 4 OP2 C B 25 -2.981 -21.397 36.637 1.00 43.39 O
ATOM 5 O5' C B 25 -0.717 -21.724 35.489 1.00 48.51 O
ATOM 6 C5' C B 25 0.732 -21.807 35.372 1.00 43.76 C
ATOM 7 C4' C B 25 1.053 -21.386 33.938 1.00 46.63 C
ATOM 8 O4' C B 25 0.468 -22.378 33.002 1.00 47.82 O
ATOM 9 C3' C B 25 0.423 -20.073 33.520 1.00 43.92 C
ATOM 10 O3' C B 25 1.212 -18.834 33.897 1.00 51.52 O
ATOM 11 C2' C B 25 0.368 -20.246 32.004 1.00 42.20 C
ATOM 12 O2' C B 25 1.660 -20.080 31.460 1.00 43.16 O
ATOM 13 C1' C B 25 -0.004 -21.728 31.833 1.00 45.87 C
ATOM 14 N1 C B 25 -1.465 -22.010 31.591 1.00 39.68 N
ATOM 15 C2 C B 25 -1.970 -21.923 30.291 1.00 40.37 C
ATOM 16 O2 C B 25 -1.225 -21.613 29.362 1.00 36.86 O
ATOM 17 N3 C B 25 -3.268 -22.159 30.064 1.00 39.88 N
ATOM 18 C4 C B 25 -4.085 -22.487 31.064 1.00 44.78 C
ATOM 19 N4 C B 25 -5.389 -22.756 30.769 1.00 43.35 N
ATOM 20 C5 C B 25 -3.594 -22.573 32.407 1.00 42.84 C
ATOM 21 C6 C B 25 -2.293 -22.322 32.617 1.00 39.78 C
ATOM 22 P U B 26 0.399 -17.471 34.158 1.00 50.66 P
ATOM 23 OP1 U B 26 1.234 -16.495 34.883 1.00 49.35 O
ATOM 24 OP2 U B 26 -0.940 -17.893 34.603 1.00 42.01 O
ATOM 25 O5' U B 26 0.144 -16.737 32.731 1.00 50.50 O
TER
ATOM 2 P A A 56 10.857 -24.118 31.558 1.00 63.18 P
ATOM 3 OP1 A A 56 10.556 -23.773 32.998 1.00 55.20 O
ATOM 4 OP2 A A 56 12.210 -24.281 30.959 1.00 54.49 O
ATOM 5 O5' A A 56 9.977 -25.408 31.127 1.00 58.51 O
ATOM 6 C5' A A 56 10.571 -26.673 30.917 1.00 53.64 C
ATOM 7 C4' A A 56 9.583 -27.710 30.386 1.00 53.41 C
ATOM 8 O4' A A 56 8.440 -28.012 31.241 1.00 55.89 O
ATOM 9 C3' A A 56 8.980 -27.232 29.093 1.00 51.81 C
ATOM 10 O3' A A 56 9.781 -27.755 28.073 1.00 54.76 O
ATOM 11 C2' A A 56 7.640 -27.930 29.064 1.00 51.64 C
ATOM 12 O2' A A 56 7.811 -29.296 28.737 1.00 51.40 O
ATOM 13 C1' A A 56 7.238 -27.913 30.495 1.00 47.51 C
ATOM 14 N9 A A 56 6.483 -26.794 31.043 1.00 48.61 N
ATOM 15 C8 A A 56 6.952 -25.769 31.796 1.00 42.88 C
ATOM 16 N7 A A 56 5.971 -25.035 32.262 1.00 46.50 N
ATOM 17 C5 A A 56 4.794 -25.585 31.791 1.00 42.77 C
ATOM 18 C6 A A 56 3.416 -25.259 31.930 1.00 44.75 C
ATOM 19 N6 A A 56 2.919 -24.212 32.610 1.00 40.10 N
ATOM 20 N1 A A 56 2.520 -26.074 31.342 1.00 39.52 N
ATOM 21 C2 A A 56 2.983 -27.119 30.675 1.00 40.60 C
ATOM 22 N3 A A 56 4.228 -27.530 30.470 1.00 46.08 N
ATOM 23 C4 A A 56 5.098 -26.681 31.044 1.00 43.48 C
ATOM 24 P A A 57 9.862 -26.886 26.760 1.00 50.81 P
ATOM 25 OP1 A A 57 10.709 -27.562 25.724 1.00 45.20 O
ATOM 26 OP2 A A 57 10.244 -25.564 27.275 1.00 49.20 O
ATOM 27 O5' A A 57 8.311 -26.883 26.263 1.00 49.84 O
TER
ATOM 1 O3' G B 24 -1.243 -23.081 37.460 1.00 43.60 O
ATOM 2 P C B 25 -1.531 -21.595 36.866 1.00 53.89 P
ATOM 3 OP1 C B 25 -0.884 -20.561 37.726 1.00 54.99 O
ATOM 4 OP2 C B 25 -2.981 -21.397 36.637 1.00 43.39 O
ATOM 5 O5' C B 25 -0.717 -21.724 35.489 1.00 48.51 O
ATOM 6 C5' C B 25 0.732 -21.807 35.372 1.00 43.76 C
ATOM 7 C4' C B 25 1.053 -21.386 33.938 1.00 46.63 C
ATOM 8 O4' C B 25 0.468 -22.378 33.002 1.00 47.82 O
ATOM 9 C3' C B 25 0.423 -20.073 33.520 1.00 43.92 C
ATOM 10 O3' C B 25 1.212 -18.834 33.897 1.00 51.52 O
ATOM 11 C2' C B 25 0.368 -20.246 32.004 1.00 42.20 C
ATOM 12 O2' C B 25 1.660 -20.080 31.460 1.00 43.16 O
ATOM 13 C1' C B 25 -0.004 -21.728 31.833 1.00 45.87 C
ATOM 14 N1 C B 25 -1.465 -22.010 31.591 1.00 39.68 N
ATOM 15 C2 C B 25 -1.970 -21.923 30.291 1.00 40.37 C
ATOM 16 O2 C B 25 -1.225 -21.613 29.362 1.00 36.86 O
ATOM 17 N3 C B 25 -3.268 -22.159 30.064 1.00 39.88 N
ATOM 18 C4 C B 25 -4.085 -22.487 31.064 1.00 44.78 C
ATOM 19 N4 C B 25 -5.389 -22.756 30.769 1.00 43.35 N
ATOM 20 C5 C B 25 -3.594 -22.573 32.407 1.00 42.84 C
ATOM 21 C6 C B 25 -2.293 -22.322 32.617 1.00 39.78 C
ATOM 22 P U B 26 0.399 -17.471 34.158 1.00 50.66 P
ATOM 23 OP1 U B 26 1.234 -16.495 34.883 1.00 49.35 O
ATOM 24 OP2 U B 26 -0.940 -17.893 34.603 1.00 42.01 O
ATOM 25 O5' U B 26 0.144 -16.737 32.731 1.00 50.50 O
TER
Atoms:
OP1: (10.556,-23.773,32.998)
OP2: (12.210,-24.281,30.959)
C3': (8.980,-27.232,29.093)
C1': (7.238,-27.913,30.495)
C5': (10.571,-26.673,30.917)
O4': (8.440,-28.012,31.241)
C8: (6.952,-25.769,31.796)
O2': (7.811,-29.296,28.737)
C6: (3.416,-25.259,31.930)
C5: (4.794,-25.585,31.791)
C4: (5.098,-26.681,31.044)
P: (10.857,-24.118,31.558)
C4': (9.583,-27.710,30.386)
C2': (7.640,-27.930,29.064)
C2: (2.983,-27.119,30.675)
N1: (2.520,-26.074,31.342)
N3: (4.228,-27.530,30.470)
N6: (2.919,-24.212,32.610)
N7: (5.971,-25.035,32.262)
N9: (6.483,-26.794,31.043)
O5': (9.977,-25.408,31.127)
O3': (9.781,-27.755,28.073)
OP2: (12.210,-24.281,30.959)
C3': (8.980,-27.232,29.093)
C1': (7.238,-27.913,30.495)
C5': (10.571,-26.673,30.917)
O4': (8.440,-28.012,31.241)
C8: (6.952,-25.769,31.796)
O2': (7.811,-29.296,28.737)
C6: (3.416,-25.259,31.930)
C5: (4.794,-25.585,31.791)
C4: (5.098,-26.681,31.044)
P: (10.857,-24.118,31.558)
C4': (9.583,-27.710,30.386)
C2': (7.640,-27.930,29.064)
C2: (2.983,-27.119,30.675)
N1: (2.520,-26.074,31.342)
N3: (4.228,-27.530,30.470)
N6: (2.919,-24.212,32.610)
N7: (5.971,-25.035,32.262)
N9: (6.483,-26.794,31.043)
O5': (9.977,-25.408,31.127)
O3': (9.781,-27.755,28.073)
C2: (-1.970,-21.923,30.291)
OP1: (-0.884,-20.561,37.726)
OP2: (-2.981,-21.397,36.637)
C4: (-4.085,-22.487,31.064)
O5': (-0.717,-21.724,35.489)
C3': (0.423,-20.073,33.520)
C1': (-0.004,-21.728,31.833)
O4': (0.468,-22.378,33.002)
C5': (0.732,-21.807,35.372)
P: (-1.531,-21.595,36.866)
O2: (-1.225,-21.613,29.362)
C4': (1.053,-21.386,33.938)
C2': (0.368,-20.246,32.004)
O2': (1.660,-20.080,31.460)
N1: (-1.465,-22.010,31.591)
N3: (-3.268,-22.159,30.064)
N4: (-5.389,-22.756,30.769)
C6: (-2.293,-22.322,32.617)
C5: (-3.594,-22.573,32.407)
O3': (1.212,-18.834,33.897)
OP1: (-0.884,-20.561,37.726)
OP2: (-2.981,-21.397,36.637)
C4: (-4.085,-22.487,31.064)
O5': (-0.717,-21.724,35.489)
C3': (0.423,-20.073,33.520)
C1': (-0.004,-21.728,31.833)
O4': (0.468,-22.378,33.002)
C5': (0.732,-21.807,35.372)
P: (-1.531,-21.595,36.866)
O2: (-1.225,-21.613,29.362)
C4': (1.053,-21.386,33.938)
C2': (0.368,-20.246,32.004)
O2': (1.660,-20.080,31.460)
N1: (-1.465,-22.010,31.591)
N3: (-3.268,-22.159,30.064)
N4: (-5.389,-22.756,30.769)
C6: (-2.293,-22.322,32.617)
C5: (-3.594,-22.573,32.407)
O3': (1.212,-18.834,33.897)
Image (generated by PyMOL):