Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5F:B28:C2
Extra
PDB:
ATOM 1 O3' C A 27 39.226 -4.605 44.058 1.00 65.12 O
ATOM 2 P G A 28 40.549 -5.141 43.317 1.00 64.92 P
ATOM 3 OP1 G A 28 40.431 -6.615 43.253 1.00 67.68 O
ATOM 4 OP2 G A 28 41.768 -4.523 43.901 1.00 64.79 O
ATOM 5 O5' G A 28 40.383 -4.589 41.842 1.00 66.27 O
ATOM 6 C5' G A 28 39.263 -4.972 41.075 1.00 65.39 C
ATOM 7 C4' G A 28 39.346 -4.367 39.709 1.00 67.33 C
ATOM 8 O4' G A 28 39.054 -2.952 39.808 1.00 67.61 O
ATOM 9 C3' G A 28 40.719 -4.411 39.052 1.00 68.18 C
ATOM 10 O3' G A 28 40.987 -5.646 38.407 1.00 69.34 O
ATOM 11 C2' G A 28 40.596 -3.280 38.048 1.00 68.75 C
ATOM 12 O2' G A 28 39.771 -3.648 36.964 1.00 68.11 O
ATOM 13 C1' G A 28 39.841 -2.246 38.871 1.00 67.16 C
ATOM 14 N9 G A 28 40.798 -1.420 39.589 1.00 66.52 N
ATOM 15 C8 G A 28 41.206 -1.534 40.893 1.00 67.45 C
ATOM 16 N7 G A 28 42.097 -0.641 41.228 1.00 69.26 N
ATOM 17 C5 G A 28 42.278 0.108 40.071 1.00 69.01 C
ATOM 18 C6 G A 28 43.119 1.226 39.810 1.00 69.25 C
ATOM 19 O6 G A 28 43.884 1.814 40.581 1.00 68.26 O
ATOM 20 N1 G A 28 43.004 1.654 38.493 1.00 68.90 N
ATOM 21 C2 G A 28 42.185 1.092 37.553 1.00 67.78 C
ATOM 22 N2 G A 28 42.234 1.629 36.329 1.00 70.02 N
ATOM 23 N3 G A 28 41.383 0.075 37.789 1.00 67.07 N
ATOM 24 C4 G A 28 41.485 -0.366 39.055 1.00 67.56 C
ATOM 25 P A A 29 42.505 -6.085 38.105 1.00 65.21 P
ATOM 26 OP1 A A 29 42.355 -7.279 37.244 1.00 69.12 O
ATOM 27 OP2 A A 29 43.268 -6.180 39.369 1.00 64.97 O
ATOM 28 O5' A A 29 43.122 -4.901 37.237 1.00 68.43 O
TER
ATOM 1 O3' C B 1 43.121 8.857 33.927 1.00 62.60 O
ATOM 2 P G B 2 41.667 9.251 34.441 1.00 63.63 P
ATOM 3 OP1 G B 2 41.106 10.223 33.476 1.00 66.69 O
ATOM 4 OP2 G B 2 41.806 9.601 35.879 1.00 62.56 O
ATOM 5 O5' G B 2 40.818 7.917 34.356 1.00 64.37 O
ATOM 6 C5' G B 2 40.545 7.292 33.114 1.00 66.51 C
ATOM 7 C4' G B 2 39.830 6.001 33.372 1.00 65.62 C
ATOM 8 O4' G B 2 40.681 5.172 34.195 1.00 66.24 O
ATOM 9 C3' G B 2 38.570 6.161 34.195 1.00 66.15 C
ATOM 10 O3' G B 2 37.481 6.419 33.330 1.00 68.40 O
ATOM 11 C2' G B 2 38.435 4.798 34.854 1.00 64.20 C
ATOM 12 O2' G B 2 37.923 3.833 33.974 1.00 62.90 O
ATOM 13 C1' G B 2 39.895 4.449 35.116 1.00 63.40 C
ATOM 14 N9 G B 2 40.393 4.743 36.453 1.00 65.57 N
ATOM 15 C8 G B 2 41.270 5.738 36.808 1.00 65.34 C
ATOM 16 N7 G B 2 41.613 5.691 38.067 1.00 66.08 N
ATOM 17 C5 G B 2 40.899 4.615 38.575 1.00 65.35 C
ATOM 18 C6 G B 2 40.875 4.066 39.877 1.00 65.93 C
ATOM 19 O6 G B 2 41.504 4.436 40.876 1.00 66.34 O
ATOM 20 N1 G B 2 40.013 2.972 39.957 1.00 64.76 N
ATOM 21 C2 G B 2 39.273 2.472 38.911 1.00 64.38 C
ATOM 22 N2 G B 2 38.505 1.408 39.174 1.00 64.51 N
ATOM 23 N3 G B 2 39.288 2.978 37.693 1.00 65.41 N
ATOM 24 C4 G B 2 40.121 4.036 37.596 1.00 65.73 C
ATOM 25 P U B 3 36.152 7.083 33.919 1.00 69.79 P
ATOM 26 OP1 U B 3 35.166 7.218 32.812 1.00 71.10 O
ATOM 27 OP2 U B 3 36.573 8.280 34.692 1.00 72.16 O
ATOM 28 O5' U B 3 35.617 5.995 34.948 1.00 69.56 O
TER
ATOM 2 P G A 28 40.549 -5.141 43.317 1.00 64.92 P
ATOM 3 OP1 G A 28 40.431 -6.615 43.253 1.00 67.68 O
ATOM 4 OP2 G A 28 41.768 -4.523 43.901 1.00 64.79 O
ATOM 5 O5' G A 28 40.383 -4.589 41.842 1.00 66.27 O
ATOM 6 C5' G A 28 39.263 -4.972 41.075 1.00 65.39 C
ATOM 7 C4' G A 28 39.346 -4.367 39.709 1.00 67.33 C
ATOM 8 O4' G A 28 39.054 -2.952 39.808 1.00 67.61 O
ATOM 9 C3' G A 28 40.719 -4.411 39.052 1.00 68.18 C
ATOM 10 O3' G A 28 40.987 -5.646 38.407 1.00 69.34 O
ATOM 11 C2' G A 28 40.596 -3.280 38.048 1.00 68.75 C
ATOM 12 O2' G A 28 39.771 -3.648 36.964 1.00 68.11 O
ATOM 13 C1' G A 28 39.841 -2.246 38.871 1.00 67.16 C
ATOM 14 N9 G A 28 40.798 -1.420 39.589 1.00 66.52 N
ATOM 15 C8 G A 28 41.206 -1.534 40.893 1.00 67.45 C
ATOM 16 N7 G A 28 42.097 -0.641 41.228 1.00 69.26 N
ATOM 17 C5 G A 28 42.278 0.108 40.071 1.00 69.01 C
ATOM 18 C6 G A 28 43.119 1.226 39.810 1.00 69.25 C
ATOM 19 O6 G A 28 43.884 1.814 40.581 1.00 68.26 O
ATOM 20 N1 G A 28 43.004 1.654 38.493 1.00 68.90 N
ATOM 21 C2 G A 28 42.185 1.092 37.553 1.00 67.78 C
ATOM 22 N2 G A 28 42.234 1.629 36.329 1.00 70.02 N
ATOM 23 N3 G A 28 41.383 0.075 37.789 1.00 67.07 N
ATOM 24 C4 G A 28 41.485 -0.366 39.055 1.00 67.56 C
ATOM 25 P A A 29 42.505 -6.085 38.105 1.00 65.21 P
ATOM 26 OP1 A A 29 42.355 -7.279 37.244 1.00 69.12 O
ATOM 27 OP2 A A 29 43.268 -6.180 39.369 1.00 64.97 O
ATOM 28 O5' A A 29 43.122 -4.901 37.237 1.00 68.43 O
TER
ATOM 1 O3' C B 1 43.121 8.857 33.927 1.00 62.60 O
ATOM 2 P G B 2 41.667 9.251 34.441 1.00 63.63 P
ATOM 3 OP1 G B 2 41.106 10.223 33.476 1.00 66.69 O
ATOM 4 OP2 G B 2 41.806 9.601 35.879 1.00 62.56 O
ATOM 5 O5' G B 2 40.818 7.917 34.356 1.00 64.37 O
ATOM 6 C5' G B 2 40.545 7.292 33.114 1.00 66.51 C
ATOM 7 C4' G B 2 39.830 6.001 33.372 1.00 65.62 C
ATOM 8 O4' G B 2 40.681 5.172 34.195 1.00 66.24 O
ATOM 9 C3' G B 2 38.570 6.161 34.195 1.00 66.15 C
ATOM 10 O3' G B 2 37.481 6.419 33.330 1.00 68.40 O
ATOM 11 C2' G B 2 38.435 4.798 34.854 1.00 64.20 C
ATOM 12 O2' G B 2 37.923 3.833 33.974 1.00 62.90 O
ATOM 13 C1' G B 2 39.895 4.449 35.116 1.00 63.40 C
ATOM 14 N9 G B 2 40.393 4.743 36.453 1.00 65.57 N
ATOM 15 C8 G B 2 41.270 5.738 36.808 1.00 65.34 C
ATOM 16 N7 G B 2 41.613 5.691 38.067 1.00 66.08 N
ATOM 17 C5 G B 2 40.899 4.615 38.575 1.00 65.35 C
ATOM 18 C6 G B 2 40.875 4.066 39.877 1.00 65.93 C
ATOM 19 O6 G B 2 41.504 4.436 40.876 1.00 66.34 O
ATOM 20 N1 G B 2 40.013 2.972 39.957 1.00 64.76 N
ATOM 21 C2 G B 2 39.273 2.472 38.911 1.00 64.38 C
ATOM 22 N2 G B 2 38.505 1.408 39.174 1.00 64.51 N
ATOM 23 N3 G B 2 39.288 2.978 37.693 1.00 65.41 N
ATOM 24 C4 G B 2 40.121 4.036 37.596 1.00 65.73 C
ATOM 25 P U B 3 36.152 7.083 33.919 1.00 69.79 P
ATOM 26 OP1 U B 3 35.166 7.218 32.812 1.00 71.10 O
ATOM 27 OP2 U B 3 36.573 8.280 34.692 1.00 72.16 O
ATOM 28 O5' U B 3 35.617 5.995 34.948 1.00 69.56 O
TER
Atoms:
OP1: (40.431,-6.615,43.253)
OP2: (41.768,-4.523,43.901)
C3': (40.719,-4.411,39.052)
C1': (39.841,-2.246,38.871)
C5': (39.263,-4.972,41.075)
O6: (43.884,1.814,40.581)
O4': (39.054,-2.952,39.808)
C8: (41.206,-1.534,40.893)
C2: (42.185,1.092,37.553)
C6: (43.119,1.226,39.810)
C5: (42.278,0.108,40.071)
C4: (41.485,-0.366,39.055)
P: (40.549,-5.141,43.317)
C4': (39.346,-4.367,39.709)
C2': (40.596,-3.280,38.048)
O2': (39.771,-3.648,36.964)
N1: (43.004,1.654,38.493)
N2: (42.234,1.629,36.329)
N3: (41.383,0.075,37.789)
N7: (42.097,-0.641,41.228)
N9: (40.798,-1.420,39.589)
O5': (40.383,-4.589,41.842)
O3': (40.987,-5.646,38.407)
OP2: (41.768,-4.523,43.901)
C3': (40.719,-4.411,39.052)
C1': (39.841,-2.246,38.871)
C5': (39.263,-4.972,41.075)
O6: (43.884,1.814,40.581)
O4': (39.054,-2.952,39.808)
C8: (41.206,-1.534,40.893)
C2: (42.185,1.092,37.553)
C6: (43.119,1.226,39.810)
C5: (42.278,0.108,40.071)
C4: (41.485,-0.366,39.055)
P: (40.549,-5.141,43.317)
C4': (39.346,-4.367,39.709)
C2': (40.596,-3.280,38.048)
O2': (39.771,-3.648,36.964)
N1: (43.004,1.654,38.493)
N2: (42.234,1.629,36.329)
N3: (41.383,0.075,37.789)
N7: (42.097,-0.641,41.228)
N9: (40.798,-1.420,39.589)
O5': (40.383,-4.589,41.842)
O3': (40.987,-5.646,38.407)
OP1: (41.106,10.223,33.476)
OP2: (41.806,9.601,35.879)
C3': (38.570,6.161,34.195)
C1': (39.895,4.449,35.116)
C5': (40.545,7.292,33.114)
O6: (41.504,4.436,40.876)
O4': (40.681,5.172,34.195)
C8: (41.270,5.738,36.808)
C2: (39.273,2.472,38.911)
C6: (40.875,4.066,39.877)
C5: (40.899,4.615,38.575)
C4: (40.121,4.036,37.596)
P: (41.667,9.251,34.441)
C4': (39.830,6.001,33.372)
C2': (38.435,4.798,34.854)
O2': (37.923,3.833,33.974)
N1: (40.013,2.972,39.957)
N2: (38.505,1.408,39.174)
N3: (39.288,2.978,37.693)
N7: (41.613,5.691,38.067)
N9: (40.393,4.743,36.453)
O5': (40.818,7.917,34.356)
O3': (37.481,6.419,33.330)
OP2: (41.806,9.601,35.879)
C3': (38.570,6.161,34.195)
C1': (39.895,4.449,35.116)
C5': (40.545,7.292,33.114)
O6: (41.504,4.436,40.876)
O4': (40.681,5.172,34.195)
C8: (41.270,5.738,36.808)
C2: (39.273,2.472,38.911)
C6: (40.875,4.066,39.877)
C5: (40.899,4.615,38.575)
C4: (40.121,4.036,37.596)
P: (41.667,9.251,34.441)
C4': (39.830,6.001,33.372)
C2': (38.435,4.798,34.854)
O2': (37.923,3.833,33.974)
N1: (40.013,2.972,39.957)
N2: (38.505,1.408,39.174)
N3: (39.288,2.978,37.693)
N7: (41.613,5.691,38.067)
N9: (40.393,4.743,36.453)
O5': (40.818,7.917,34.356)
O3': (37.481,6.419,33.330)
Image (generated by PyMOL):