Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GS5:C15:C19
Extra
PDB:
ATOM 1 O3' C A 14 39.181 -4.909 43.374 1.00 59.27 O
ATOM 2 P G A 15 40.524 -5.460 42.682 1.00 61.18 P
ATOM 3 OP1 G A 15 40.387 -6.931 42.644 1.00 63.62 O
ATOM 4 OP2 G A 15 41.724 -4.854 43.306 1.00 57.80 O
ATOM 5 O5' G A 15 40.417 -4.927 41.192 1.00 59.39 O
ATOM 6 C5' G A 15 39.366 -5.383 40.364 1.00 59.94 C
ATOM 7 C4' G A 15 39.444 -4.739 39.012 1.00 64.57 C
ATOM 8 O4' G A 15 39.127 -3.334 39.155 1.00 65.01 O
ATOM 9 C3' G A 15 40.806 -4.741 38.340 1.00 65.11 C
ATOM 10 O3' G A 15 41.118 -5.961 37.692 1.00 62.57 O
ATOM 11 C2' G A 15 40.658 -3.579 37.377 1.00 65.52 C
ATOM 12 O2' G A 15 39.817 -3.914 36.293 1.00 64.30 O
ATOM 13 C1' G A 15 39.907 -2.582 38.251 1.00 65.15 C
ATOM 14 N9 G A 15 40.862 -1.788 39.012 1.00 64.77 N
ATOM 15 C8 G A 15 41.234 -1.934 40.325 1.00 66.82 C
ATOM 16 N7 G A 15 42.126 -1.058 40.699 1.00 64.91 N
ATOM 17 C5 G A 15 42.346 -0.290 39.564 1.00 64.02 C
ATOM 18 C6 G A 15 43.206 0.820 39.348 1.00 64.06 C
ATOM 19 O6 G A 15 43.962 1.374 40.151 1.00 62.98 O
ATOM 20 N1 G A 15 43.129 1.280 38.036 1.00 64.57 N
ATOM 21 C2 G A 15 42.332 0.739 37.057 1.00 65.93 C
ATOM 22 N2 G A 15 42.416 1.293 35.830 1.00 68.32 N
ATOM 23 N3 G A 15 41.519 -0.276 37.255 1.00 65.11 N
ATOM 24 C4 G A 15 41.578 -0.737 38.518 1.00 63.56 C
ATOM 25 P A A 16 42.640 -6.477 37.669 1.00 62.35 P
ATOM 26 OP1 A A 16 42.602 -7.761 36.936 1.00 66.04 O
ATOM 27 OP2 A A 16 43.208 -6.431 39.037 1.00 62.56 O
ATOM 28 O5' A A 16 43.390 -5.389 36.779 1.00 63.44 O
TER
ATOM 1 O3' C B 18 43.321 8.290 33.336 1.00 57.75 O
ATOM 2 P G B 19 41.892 8.821 33.819 1.00 60.46 P
ATOM 3 OP1 G B 19 41.496 9.839 32.815 1.00 55.79 O
ATOM 4 OP2 G B 19 41.994 9.180 35.257 1.00 49.81 O
ATOM 5 O5' G B 19 40.921 7.563 33.725 1.00 59.83 O
ATOM 6 C5' G B 19 40.684 6.897 32.491 1.00 60.18 C
ATOM 7 C4' G B 19 39.982 5.597 32.760 1.00 59.42 C
ATOM 8 O4' G B 19 40.846 4.765 33.565 1.00 60.14 O
ATOM 9 C3' G B 19 38.720 5.735 33.583 1.00 58.55 C
ATOM 10 O3' G B 19 37.636 5.986 32.706 1.00 57.76 O
ATOM 11 C2' G B 19 38.607 4.369 34.243 1.00 57.52 C
ATOM 12 O2' G B 19 38.072 3.392 33.380 1.00 54.58 O
ATOM 13 C1' G B 19 40.074 4.041 34.499 1.00 61.26 C
ATOM 14 N9 G B 19 40.567 4.365 35.833 1.00 62.46 N
ATOM 15 C8 G B 19 41.442 5.370 36.174 1.00 62.72 C
ATOM 16 N7 G B 19 41.766 5.359 37.440 1.00 62.69 N
ATOM 17 C5 G B 19 41.048 4.295 37.969 1.00 61.13 C
ATOM 18 C6 G B 19 41.008 3.782 39.286 1.00 60.16 C
ATOM 19 O6 G B 19 41.635 4.168 40.276 1.00 61.02 O
ATOM 20 N1 G B 19 40.138 2.700 39.389 1.00 57.10 N
ATOM 21 C2 G B 19 39.409 2.173 38.353 1.00 58.14 C
ATOM 22 N2 G B 19 38.609 1.135 38.650 1.00 58.05 N
ATOM 23 N3 G B 19 39.453 2.632 37.113 1.00 59.29 N
ATOM 24 C4 G B 19 40.285 3.687 36.995 1.00 61.29 C
ATOM 25 P U B 20 36.281 6.617 33.284 1.00 63.50 P
ATOM 26 OP1 U B 20 35.318 6.700 32.157 1.00 63.13 O
ATOM 27 OP2 U B 20 36.667 7.848 34.026 1.00 62.68 O
ATOM 28 O5' U B 20 35.730 5.520 34.302 1.00 62.28 O
TER
ATOM 2 P G A 15 40.524 -5.460 42.682 1.00 61.18 P
ATOM 3 OP1 G A 15 40.387 -6.931 42.644 1.00 63.62 O
ATOM 4 OP2 G A 15 41.724 -4.854 43.306 1.00 57.80 O
ATOM 5 O5' G A 15 40.417 -4.927 41.192 1.00 59.39 O
ATOM 6 C5' G A 15 39.366 -5.383 40.364 1.00 59.94 C
ATOM 7 C4' G A 15 39.444 -4.739 39.012 1.00 64.57 C
ATOM 8 O4' G A 15 39.127 -3.334 39.155 1.00 65.01 O
ATOM 9 C3' G A 15 40.806 -4.741 38.340 1.00 65.11 C
ATOM 10 O3' G A 15 41.118 -5.961 37.692 1.00 62.57 O
ATOM 11 C2' G A 15 40.658 -3.579 37.377 1.00 65.52 C
ATOM 12 O2' G A 15 39.817 -3.914 36.293 1.00 64.30 O
ATOM 13 C1' G A 15 39.907 -2.582 38.251 1.00 65.15 C
ATOM 14 N9 G A 15 40.862 -1.788 39.012 1.00 64.77 N
ATOM 15 C8 G A 15 41.234 -1.934 40.325 1.00 66.82 C
ATOM 16 N7 G A 15 42.126 -1.058 40.699 1.00 64.91 N
ATOM 17 C5 G A 15 42.346 -0.290 39.564 1.00 64.02 C
ATOM 18 C6 G A 15 43.206 0.820 39.348 1.00 64.06 C
ATOM 19 O6 G A 15 43.962 1.374 40.151 1.00 62.98 O
ATOM 20 N1 G A 15 43.129 1.280 38.036 1.00 64.57 N
ATOM 21 C2 G A 15 42.332 0.739 37.057 1.00 65.93 C
ATOM 22 N2 G A 15 42.416 1.293 35.830 1.00 68.32 N
ATOM 23 N3 G A 15 41.519 -0.276 37.255 1.00 65.11 N
ATOM 24 C4 G A 15 41.578 -0.737 38.518 1.00 63.56 C
ATOM 25 P A A 16 42.640 -6.477 37.669 1.00 62.35 P
ATOM 26 OP1 A A 16 42.602 -7.761 36.936 1.00 66.04 O
ATOM 27 OP2 A A 16 43.208 -6.431 39.037 1.00 62.56 O
ATOM 28 O5' A A 16 43.390 -5.389 36.779 1.00 63.44 O
TER
ATOM 1 O3' C B 18 43.321 8.290 33.336 1.00 57.75 O
ATOM 2 P G B 19 41.892 8.821 33.819 1.00 60.46 P
ATOM 3 OP1 G B 19 41.496 9.839 32.815 1.00 55.79 O
ATOM 4 OP2 G B 19 41.994 9.180 35.257 1.00 49.81 O
ATOM 5 O5' G B 19 40.921 7.563 33.725 1.00 59.83 O
ATOM 6 C5' G B 19 40.684 6.897 32.491 1.00 60.18 C
ATOM 7 C4' G B 19 39.982 5.597 32.760 1.00 59.42 C
ATOM 8 O4' G B 19 40.846 4.765 33.565 1.00 60.14 O
ATOM 9 C3' G B 19 38.720 5.735 33.583 1.00 58.55 C
ATOM 10 O3' G B 19 37.636 5.986 32.706 1.00 57.76 O
ATOM 11 C2' G B 19 38.607 4.369 34.243 1.00 57.52 C
ATOM 12 O2' G B 19 38.072 3.392 33.380 1.00 54.58 O
ATOM 13 C1' G B 19 40.074 4.041 34.499 1.00 61.26 C
ATOM 14 N9 G B 19 40.567 4.365 35.833 1.00 62.46 N
ATOM 15 C8 G B 19 41.442 5.370 36.174 1.00 62.72 C
ATOM 16 N7 G B 19 41.766 5.359 37.440 1.00 62.69 N
ATOM 17 C5 G B 19 41.048 4.295 37.969 1.00 61.13 C
ATOM 18 C6 G B 19 41.008 3.782 39.286 1.00 60.16 C
ATOM 19 O6 G B 19 41.635 4.168 40.276 1.00 61.02 O
ATOM 20 N1 G B 19 40.138 2.700 39.389 1.00 57.10 N
ATOM 21 C2 G B 19 39.409 2.173 38.353 1.00 58.14 C
ATOM 22 N2 G B 19 38.609 1.135 38.650 1.00 58.05 N
ATOM 23 N3 G B 19 39.453 2.632 37.113 1.00 59.29 N
ATOM 24 C4 G B 19 40.285 3.687 36.995 1.00 61.29 C
ATOM 25 P U B 20 36.281 6.617 33.284 1.00 63.50 P
ATOM 26 OP1 U B 20 35.318 6.700 32.157 1.00 63.13 O
ATOM 27 OP2 U B 20 36.667 7.848 34.026 1.00 62.68 O
ATOM 28 O5' U B 20 35.730 5.520 34.302 1.00 62.28 O
TER
Atoms:
OP1: (40.387,-6.931,42.644)
OP2: (41.724,-4.854,43.306)
C3': (40.806,-4.741,38.340)
C1': (39.907,-2.582,38.251)
C5': (39.366,-5.383,40.364)
O6: (43.962,1.374,40.151)
O4': (39.127,-3.334,39.155)
C8: (41.234,-1.934,40.325)
C2: (42.332,0.739,37.057)
C6: (43.206,0.820,39.348)
C5: (42.346,-0.290,39.564)
C4: (41.578,-0.737,38.518)
P: (40.524,-5.460,42.682)
C4': (39.444,-4.739,39.012)
C2': (40.658,-3.579,37.377)
O2': (39.817,-3.914,36.293)
N1: (43.129,1.280,38.036)
N2: (42.416,1.293,35.830)
N3: (41.519,-0.276,37.255)
N7: (42.126,-1.058,40.699)
N9: (40.862,-1.788,39.012)
O5': (40.417,-4.927,41.192)
O3': (41.118,-5.961,37.692)
OP2: (41.724,-4.854,43.306)
C3': (40.806,-4.741,38.340)
C1': (39.907,-2.582,38.251)
C5': (39.366,-5.383,40.364)
O6: (43.962,1.374,40.151)
O4': (39.127,-3.334,39.155)
C8: (41.234,-1.934,40.325)
C2: (42.332,0.739,37.057)
C6: (43.206,0.820,39.348)
C5: (42.346,-0.290,39.564)
C4: (41.578,-0.737,38.518)
P: (40.524,-5.460,42.682)
C4': (39.444,-4.739,39.012)
C2': (40.658,-3.579,37.377)
O2': (39.817,-3.914,36.293)
N1: (43.129,1.280,38.036)
N2: (42.416,1.293,35.830)
N3: (41.519,-0.276,37.255)
N7: (42.126,-1.058,40.699)
N9: (40.862,-1.788,39.012)
O5': (40.417,-4.927,41.192)
O3': (41.118,-5.961,37.692)
OP1: (41.496,9.839,32.815)
OP2: (41.994,9.180,35.257)
C3': (38.720,5.735,33.583)
C1': (40.074,4.041,34.499)
C5': (40.684,6.897,32.491)
O6: (41.635,4.168,40.276)
O4': (40.846,4.765,33.565)
C8: (41.442,5.370,36.174)
C2: (39.409,2.173,38.353)
C6: (41.008,3.782,39.286)
C5: (41.048,4.295,37.969)
C4: (40.285,3.687,36.995)
P: (41.892,8.821,33.819)
C4': (39.982,5.597,32.760)
C2': (38.607,4.369,34.243)
O2': (38.072,3.392,33.380)
N1: (40.138,2.700,39.389)
N2: (38.609,1.135,38.650)
N3: (39.453,2.632,37.113)
N7: (41.766,5.359,37.440)
N9: (40.567,4.365,35.833)
O5': (40.921,7.563,33.725)
O3': (37.636,5.986,32.706)
OP2: (41.994,9.180,35.257)
C3': (38.720,5.735,33.583)
C1': (40.074,4.041,34.499)
C5': (40.684,6.897,32.491)
O6: (41.635,4.168,40.276)
O4': (40.846,4.765,33.565)
C8: (41.442,5.370,36.174)
C2: (39.409,2.173,38.353)
C6: (41.008,3.782,39.286)
C5: (41.048,4.295,37.969)
C4: (40.285,3.687,36.995)
P: (41.892,8.821,33.819)
C4': (39.982,5.597,32.760)
C2': (38.607,4.369,34.243)
O2': (38.072,3.392,33.380)
N1: (40.138,2.700,39.389)
N2: (38.609,1.135,38.650)
N3: (39.453,2.632,37.113)
N7: (41.766,5.359,37.440)
N9: (40.567,4.365,35.833)
O5': (40.921,7.563,33.725)
O3': (37.636,5.986,32.706)
Image (generated by PyMOL):