ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A279:A280

Extra

PDB:
ATOM 1 O3' C A 278 -15.978 214.355 154.446 1.00 49.01 O
ATOM 2 P G A 279 -16.698 213.764 155.751 1.00 23.21 P
ATOM 3 OP1 G A 279 -17.165 214.914 156.571 1.00 86.82 O
ATOM 4 OP2 G A 279 -15.816 212.734 156.371 1.00 86.82 O
ATOM 5 O5' G A 279 -17.975 213.035 155.158 1.00 33.45 O
ATOM 6 C5' G A 279 -19.233 213.053 155.856 1.00 33.45 C
ATOM 7 C4' G A 279 -20.177 213.999 155.162 1.00 33.45 C
ATOM 8 O4' G A 279 -19.831 214.017 153.751 1.00 33.45 O
ATOM 9 C3' G A 279 -21.656 213.646 155.262 1.00 33.45 C
ATOM 10 O3' G A 279 -22.413 214.845 155.610 1.00 33.45 O
ATOM 11 C2' G A 279 -21.898 212.861 153.962 1.00 33.45 C
ATOM 12 O2' G A 279 -23.226 212.849 153.482 1.00 33.45 O
ATOM 13 C1' G A 279 -20.891 213.483 152.982 1.00 33.45 C
ATOM 14 N9 G A 279 -20.286 212.564 152.013 1.00 35.07 N
ATOM 15 C8 G A 279 -19.336 211.613 152.284 1.00 35.07 C
ATOM 16 N7 G A 279 -18.905 210.997 151.217 1.00 35.07 N
ATOM 17 C5 G A 279 -19.627 211.557 150.177 1.00 35.07 C
ATOM 18 C6 G A 279 -19.577 211.293 148.790 1.00 35.07 C
ATOM 19 O6 G A 279 -18.854 210.511 148.188 1.00 35.07 O
ATOM 20 N1 G A 279 -20.481 212.063 148.087 1.00 35.07 N
ATOM 21 C2 G A 279 -21.325 212.980 148.642 1.00 35.07 C
ATOM 22 N2 G A 279 -22.135 213.619 147.786 1.00 35.07 N
ATOM 23 N3 G A 279 -21.376 213.254 149.940 1.00 35.07 N
ATOM 24 C4 G A 279 -20.503 212.508 150.645 1.00 35.07 C
ATOM 25 P G A 280 -23.380 215.606 154.546 1.00153.14 P
ATOM 26 OP1 G A 280 -23.647 216.956 155.119 1.00168.51 O
ATOM 27 OP2 G A 280 -24.529 214.710 154.249 1.00168.50 O
ATOM 28 O5' G A 280 -22.499 215.808 153.218 1.00176.24 O
TER

ATOM 1 O3' G B 279 -22.413 214.845 155.610 1.00 33.45 O
ATOM 2 P G B 280 -23.380 215.606 154.546 1.00153.14 P
ATOM 3 OP1 G B 280 -23.647 216.956 155.119 1.00168.51 O
ATOM 4 OP2 G B 280 -24.529 214.710 154.249 1.00168.50 O
ATOM 5 O5' G B 280 -22.499 215.808 153.218 1.00176.24 O
ATOM 6 C5' G B 280 -22.003 217.126 152.765 1.00176.24 C
ATOM 7 C4' G B 280 -20.582 216.977 152.239 1.00176.24 C
ATOM 8 O4' G B 280 -20.567 215.872 151.294 1.00176.24 O
ATOM 9 C3' G B 280 -19.845 218.077 151.466 1.00176.24 C
ATOM 10 O3' G B 280 -19.232 219.135 152.206 1.00176.24 O
ATOM 11 C2' G B 280 -18.721 217.272 150.829 1.00176.24 C
ATOM 12 O2' G B 280 -17.703 216.981 151.758 1.00176.24 O
ATOM 13 C1' G B 280 -19.426 215.975 150.469 1.00176.24 C
ATOM 14 N9 G B 280 -19.814 216.068 149.069 1.00 42.51 N
ATOM 15 C8 G B 280 -20.891 216.722 148.520 1.00 42.51 C
ATOM 16 N7 G B 280 -20.876 216.717 147.212 1.00 42.51 N
ATOM 17 C5 G B 280 -19.734 215.995 146.886 1.00 42.51 C
ATOM 18 C6 G B 280 -19.172 215.667 145.620 1.00 42.51 C
ATOM 19 O6 G B 280 -19.574 215.973 144.492 1.00 42.51 O
ATOM 20 N1 G B 280 -18.016 214.909 145.757 1.00 42.51 N
ATOM 21 C2 G B 280 -17.467 214.520 146.949 1.00 42.51 C
ATOM 22 N2 G B 280 -16.351 213.792 146.873 1.00 42.51 N
ATOM 23 N3 G B 280 -17.970 214.824 148.127 1.00 42.51 N
ATOM 24 C4 G B 280 -19.092 215.561 148.022 1.00 42.51 C
ATOM 25 P G B 281 -18.377 220.275 151.414 1.00 78.81 P
ATOM 26 OP1 G B 281 -18.075 221.357 152.386 1.00 64.47 O
ATOM 27 OP2 G B 281 -19.045 220.615 150.132 1.00 64.73 O
ATOM 28 O5' G B 281 -16.996 219.573 151.041 1.00 19.04 O
TER

Atoms:
OP1: (-17.165,214.914,156.571)
OP2: (-15.816,212.734,156.371)
C3': (-21.656,213.646,155.262)
C1': (-20.891,213.483,152.982)
C5': (-19.233,213.053,155.856)
O6: (-18.854,210.511,148.188)
O4': (-19.831,214.017,153.751)
C8: (-19.336,211.613,152.284)
C2: (-21.325,212.980,148.642)
C6: (-19.577,211.293,148.790)
C5: (-19.627,211.557,150.177)
C4: (-20.503,212.508,150.645)
P: (-16.698,213.764,155.751)
C4': (-20.177,213.999,155.162)
C2': (-21.898,212.861,153.962)
O2': (-23.226,212.849,153.482)
N1: (-20.481,212.063,148.087)
N2: (-22.135,213.619,147.786)
N3: (-21.376,213.254,149.940)
N7: (-18.905,210.997,151.217)
N9: (-20.286,212.564,152.013)
O5': (-17.975,213.035,155.158)
O3': (-22.413,214.845,155.610)
OP1: (-23.647,216.956,155.119)
OP2: (-24.529,214.710,154.249)
C3': (-19.845,218.077,151.466)
C1': (-19.426,215.975,150.469)
C5': (-22.003,217.126,152.765)
O6: (-19.574,215.973,144.492)
O4': (-20.567,215.872,151.294)
C8: (-20.891,216.722,148.520)
C2: (-17.467,214.520,146.949)
C6: (-19.172,215.667,145.620)
C5: (-19.734,215.995,146.886)
C4: (-19.092,215.561,148.022)
P: (-23.380,215.606,154.546)
C4': (-20.582,216.977,152.239)
C2': (-18.721,217.272,150.829)
O2': (-17.703,216.981,151.758)
N1: (-18.016,214.909,145.757)
N2: (-16.351,213.792,146.873)
N3: (-17.970,214.824,148.127)
N7: (-20.876,216.717,147.212)
N9: (-19.814,216.068,149.069)
O5': (-22.499,215.808,153.218)
O3': (-19.232,219.135,152.206)
Image (generated by PyMOL):
PyMOL image
show in jmol