Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A84:A97
Extra
PDB:
ATOM 1 O3' A A 83 -18.225 -98.647 61.201 1.00 0.30 O
ATOM 2 P G A 84 -19.108 -99.102 59.934 1.00 0.01 P
ATOM 3 OP1 G A 84 -19.690-100.437 60.247 1.00 0.01 O
ATOM 4 OP2 G A 84 -18.251 -98.953 58.747 1.00 0.01 O
ATOM 5 O5' G A 84 -20.267 -98.033 59.871 1.00 0.01 O
ATOM 6 C5' G A 84 -20.224 -96.970 58.941 1.00 0.01 C
ATOM 7 C4' G A 84 -19.802 -95.714 59.623 1.00 0.01 C
ATOM 8 O4' G A 84 -18.418 -95.835 60.031 1.00 0.01 O
ATOM 9 C3' G A 84 -19.815 -94.455 58.789 1.00 0.01 C
ATOM 10 O3' G A 84 -21.099 -93.902 58.646 1.00 0.01 O
ATOM 11 C2' G A 84 -18.846 -93.567 59.552 1.00 0.01 C
ATOM 12 O2' G A 84 -19.441 -93.075 60.736 1.00 0.01 O
ATOM 13 C1' G A 84 -17.789 -94.578 59.947 1.00 0.01 C
ATOM 14 N9 G A 84 -16.719 -94.665 58.961 1.00 0.01 N
ATOM 15 C8 G A 84 -16.379 -95.694 58.144 1.00 0.01 C
ATOM 16 N7 G A 84 -15.329 -95.418 57.437 1.00 0.01 N
ATOM 17 C5 G A 84 -14.988 -94.146 57.829 1.00 0.01 C
ATOM 18 C6 G A 84 -13.947 -93.303 57.431 1.00 0.01 C
ATOM 19 O6 G A 84 -13.103 -93.540 56.593 1.00 0.01 O
ATOM 20 N1 G A 84 -13.938 -92.079 58.065 1.00 0.01 N
ATOM 21 C2 G A 84 -14.843 -91.713 59.008 1.00 0.01 C
ATOM 22 N2 G A 84 -14.714 -90.492 59.524 1.00 0.01 N
ATOM 23 N3 G A 84 -15.827 -92.491 59.413 1.00 0.01 N
ATOM 24 C4 G A 84 -15.833 -93.675 58.769 1.00 0.01 C
ATOM 25 P G A 85 -21.488 -93.156 57.284 1.00 9.10 P
ATOM 26 OP1 G A 85 -22.857 -92.575 57.490 1.00 9.10 O
ATOM 27 OP2 G A 85 -21.263 -94.123 56.161 1.00 9.10 O
ATOM 28 O5' G A 85 -20.407 -91.988 57.202 1.00 9.10 O
TER
ATOM 1 O3' C B 96 -8.278 -87.123 61.084 1.00 4.53 O
ATOM 2 P G B 97 -7.558 -88.231 61.978 1.00 3.19 P
ATOM 3 OP1 G B 97 -7.136 -87.547 63.226 1.00 3.19 O
ATOM 4 OP2 G B 97 -6.532 -88.891 61.127 1.00 3.19 O
ATOM 5 O5' G B 97 -8.744 -89.261 62.286 1.00 3.19 O
ATOM 6 C5' G B 97 -9.634 -89.017 63.366 1.00 3.19 C
ATOM 7 C4' G B 97 -10.852 -89.908 63.345 1.00 3.19 C
ATOM 8 O4' G B 97 -11.370 -90.072 62.006 1.00 3.19 O
ATOM 9 C3' G B 97 -10.672 -91.335 63.794 1.00 3.19 C
ATOM 10 O3' G B 97 -10.441 -91.466 65.182 1.00 3.19 O
ATOM 11 C2' G B 97 -11.988 -91.923 63.333 1.00 3.19 C
ATOM 12 O2' G B 97 -13.059 -91.421 64.118 1.00 3.19 O
ATOM 13 C1' G B 97 -12.082 -91.300 61.952 1.00 3.19 C
ATOM 14 N9 G B 97 -11.467 -92.166 60.944 1.00 3.14 N
ATOM 15 C8 G B 97 -10.295 -91.894 60.305 1.00 3.14 C
ATOM 16 N7 G B 97 -9.950 -92.843 59.477 1.00 3.14 N
ATOM 17 C5 G B 97 -10.950 -93.780 59.591 1.00 3.14 C
ATOM 18 C6 G B 97 -11.059 -94.981 58.912 1.00 3.14 C
ATOM 19 O6 G B 97 -10.274 -95.418 58.089 1.00 3.14 O
ATOM 20 N1 G B 97 -12.184 -95.670 59.265 1.00 3.14 N
ATOM 21 C2 G B 97 -13.070 -95.216 60.180 1.00 3.14 C
ATOM 22 N2 G B 97 -14.077 -96.057 60.375 1.00 3.14 N
ATOM 23 N3 G B 97 -12.994 -94.082 60.842 1.00 3.14 N
ATOM 24 C4 G B 97 -11.900 -93.400 60.489 1.00 3.14 C
ATOM 25 P U B 98 -9.537 -92.675 65.755 1.00 2.03 P
ATOM 26 OP1 U B 98 -9.164 -92.288 67.136 1.00 2.03 O
ATOM 27 OP2 U B 98 -8.459 -92.948 64.767 1.00 2.03 O
ATOM 28 O5' U B 98 -10.554 -93.898 65.789 1.00 2.03 O
TER
ATOM 2 P G A 84 -19.108 -99.102 59.934 1.00 0.01 P
ATOM 3 OP1 G A 84 -19.690-100.437 60.247 1.00 0.01 O
ATOM 4 OP2 G A 84 -18.251 -98.953 58.747 1.00 0.01 O
ATOM 5 O5' G A 84 -20.267 -98.033 59.871 1.00 0.01 O
ATOM 6 C5' G A 84 -20.224 -96.970 58.941 1.00 0.01 C
ATOM 7 C4' G A 84 -19.802 -95.714 59.623 1.00 0.01 C
ATOM 8 O4' G A 84 -18.418 -95.835 60.031 1.00 0.01 O
ATOM 9 C3' G A 84 -19.815 -94.455 58.789 1.00 0.01 C
ATOM 10 O3' G A 84 -21.099 -93.902 58.646 1.00 0.01 O
ATOM 11 C2' G A 84 -18.846 -93.567 59.552 1.00 0.01 C
ATOM 12 O2' G A 84 -19.441 -93.075 60.736 1.00 0.01 O
ATOM 13 C1' G A 84 -17.789 -94.578 59.947 1.00 0.01 C
ATOM 14 N9 G A 84 -16.719 -94.665 58.961 1.00 0.01 N
ATOM 15 C8 G A 84 -16.379 -95.694 58.144 1.00 0.01 C
ATOM 16 N7 G A 84 -15.329 -95.418 57.437 1.00 0.01 N
ATOM 17 C5 G A 84 -14.988 -94.146 57.829 1.00 0.01 C
ATOM 18 C6 G A 84 -13.947 -93.303 57.431 1.00 0.01 C
ATOM 19 O6 G A 84 -13.103 -93.540 56.593 1.00 0.01 O
ATOM 20 N1 G A 84 -13.938 -92.079 58.065 1.00 0.01 N
ATOM 21 C2 G A 84 -14.843 -91.713 59.008 1.00 0.01 C
ATOM 22 N2 G A 84 -14.714 -90.492 59.524 1.00 0.01 N
ATOM 23 N3 G A 84 -15.827 -92.491 59.413 1.00 0.01 N
ATOM 24 C4 G A 84 -15.833 -93.675 58.769 1.00 0.01 C
ATOM 25 P G A 85 -21.488 -93.156 57.284 1.00 9.10 P
ATOM 26 OP1 G A 85 -22.857 -92.575 57.490 1.00 9.10 O
ATOM 27 OP2 G A 85 -21.263 -94.123 56.161 1.00 9.10 O
ATOM 28 O5' G A 85 -20.407 -91.988 57.202 1.00 9.10 O
TER
ATOM 1 O3' C B 96 -8.278 -87.123 61.084 1.00 4.53 O
ATOM 2 P G B 97 -7.558 -88.231 61.978 1.00 3.19 P
ATOM 3 OP1 G B 97 -7.136 -87.547 63.226 1.00 3.19 O
ATOM 4 OP2 G B 97 -6.532 -88.891 61.127 1.00 3.19 O
ATOM 5 O5' G B 97 -8.744 -89.261 62.286 1.00 3.19 O
ATOM 6 C5' G B 97 -9.634 -89.017 63.366 1.00 3.19 C
ATOM 7 C4' G B 97 -10.852 -89.908 63.345 1.00 3.19 C
ATOM 8 O4' G B 97 -11.370 -90.072 62.006 1.00 3.19 O
ATOM 9 C3' G B 97 -10.672 -91.335 63.794 1.00 3.19 C
ATOM 10 O3' G B 97 -10.441 -91.466 65.182 1.00 3.19 O
ATOM 11 C2' G B 97 -11.988 -91.923 63.333 1.00 3.19 C
ATOM 12 O2' G B 97 -13.059 -91.421 64.118 1.00 3.19 O
ATOM 13 C1' G B 97 -12.082 -91.300 61.952 1.00 3.19 C
ATOM 14 N9 G B 97 -11.467 -92.166 60.944 1.00 3.14 N
ATOM 15 C8 G B 97 -10.295 -91.894 60.305 1.00 3.14 C
ATOM 16 N7 G B 97 -9.950 -92.843 59.477 1.00 3.14 N
ATOM 17 C5 G B 97 -10.950 -93.780 59.591 1.00 3.14 C
ATOM 18 C6 G B 97 -11.059 -94.981 58.912 1.00 3.14 C
ATOM 19 O6 G B 97 -10.274 -95.418 58.089 1.00 3.14 O
ATOM 20 N1 G B 97 -12.184 -95.670 59.265 1.00 3.14 N
ATOM 21 C2 G B 97 -13.070 -95.216 60.180 1.00 3.14 C
ATOM 22 N2 G B 97 -14.077 -96.057 60.375 1.00 3.14 N
ATOM 23 N3 G B 97 -12.994 -94.082 60.842 1.00 3.14 N
ATOM 24 C4 G B 97 -11.900 -93.400 60.489 1.00 3.14 C
ATOM 25 P U B 98 -9.537 -92.675 65.755 1.00 2.03 P
ATOM 26 OP1 U B 98 -9.164 -92.288 67.136 1.00 2.03 O
ATOM 27 OP2 U B 98 -8.459 -92.948 64.767 1.00 2.03 O
ATOM 28 O5' U B 98 -10.554 -93.898 65.789 1.00 2.03 O
TER
Atoms:
OP1: (-19.690,-100.437,60.247)
OP2: (-18.251,-98.953,58.747)
C3': (-19.815,-94.455,58.789)
C1': (-17.789,-94.578,59.947)
C5': (-20.224,-96.970,58.941)
O6: (-13.103,-93.540,56.593)
O4': (-18.418,-95.835,60.031)
C8: (-16.379,-95.694,58.144)
C2: (-14.843,-91.713,59.008)
C6: (-13.947,-93.303,57.431)
C5: (-14.988,-94.146,57.829)
C4: (-15.833,-93.675,58.769)
P: (-19.108,-99.102,59.934)
C4': (-19.802,-95.714,59.623)
C2': (-18.846,-93.567,59.552)
O2': (-19.441,-93.075,60.736)
N1: (-13.938,-92.079,58.065)
N2: (-14.714,-90.492,59.524)
N3: (-15.827,-92.491,59.413)
N7: (-15.329,-95.418,57.437)
N9: (-16.719,-94.665,58.961)
O5': (-20.267,-98.033,59.871)
O3': (-21.099,-93.902,58.646)
OP2: (-18.251,-98.953,58.747)
C3': (-19.815,-94.455,58.789)
C1': (-17.789,-94.578,59.947)
C5': (-20.224,-96.970,58.941)
O6: (-13.103,-93.540,56.593)
O4': (-18.418,-95.835,60.031)
C8: (-16.379,-95.694,58.144)
C2: (-14.843,-91.713,59.008)
C6: (-13.947,-93.303,57.431)
C5: (-14.988,-94.146,57.829)
C4: (-15.833,-93.675,58.769)
P: (-19.108,-99.102,59.934)
C4': (-19.802,-95.714,59.623)
C2': (-18.846,-93.567,59.552)
O2': (-19.441,-93.075,60.736)
N1: (-13.938,-92.079,58.065)
N2: (-14.714,-90.492,59.524)
N3: (-15.827,-92.491,59.413)
N7: (-15.329,-95.418,57.437)
N9: (-16.719,-94.665,58.961)
O5': (-20.267,-98.033,59.871)
O3': (-21.099,-93.902,58.646)
OP1: (-7.136,-87.547,63.226)
OP2: (-6.532,-88.891,61.127)
C3': (-10.672,-91.335,63.794)
C1': (-12.082,-91.300,61.952)
C5': (-9.634,-89.017,63.366)
O6: (-10.274,-95.418,58.089)
O4': (-11.370,-90.072,62.006)
C8: (-10.295,-91.894,60.305)
C2: (-13.070,-95.216,60.180)
C6: (-11.059,-94.981,58.912)
C5: (-10.950,-93.780,59.591)
C4: (-11.900,-93.400,60.489)
P: (-7.558,-88.231,61.978)
C4': (-10.852,-89.908,63.345)
C2': (-11.988,-91.923,63.333)
O2': (-13.059,-91.421,64.118)
N1: (-12.184,-95.670,59.265)
N2: (-14.077,-96.057,60.375)
N3: (-12.994,-94.082,60.842)
N7: (-9.950,-92.843,59.477)
N9: (-11.467,-92.166,60.944)
O5': (-8.744,-89.261,62.286)
O3': (-10.441,-91.466,65.182)
OP2: (-6.532,-88.891,61.127)
C3': (-10.672,-91.335,63.794)
C1': (-12.082,-91.300,61.952)
C5': (-9.634,-89.017,63.366)
O6: (-10.274,-95.418,58.089)
O4': (-11.370,-90.072,62.006)
C8: (-10.295,-91.894,60.305)
C2: (-13.070,-95.216,60.180)
C6: (-11.059,-94.981,58.912)
C5: (-10.950,-93.780,59.591)
C4: (-11.900,-93.400,60.489)
P: (-7.558,-88.231,61.978)
C4': (-10.852,-89.908,63.345)
C2': (-11.988,-91.923,63.333)
O2': (-13.059,-91.421,64.118)
N1: (-12.184,-95.670,59.265)
N2: (-14.077,-96.057,60.375)
N3: (-12.994,-94.082,60.842)
N7: (-9.950,-92.843,59.477)
N9: (-11.467,-92.166,60.944)
O5': (-8.744,-89.261,62.286)
O3': (-10.441,-91.466,65.182)
Image (generated by PyMOL):