Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5A:B28:C2
Extra
PDB:
ATOM 1 O3' C A 27 39.094 -4.834 43.324 1.00 55.17 O
ATOM 2 P G A 28 40.452 -5.379 42.667 1.00 58.21 P
ATOM 3 OP1 G A 28 40.366 -6.858 42.644 1.00 63.99 O
ATOM 4 OP2 G A 28 41.603 -4.707 43.329 1.00 57.74 O
ATOM 5 O5' G A 28 40.359 -4.878 41.165 1.00 56.63 O
ATOM 6 C5' G A 28 39.250 -5.248 40.360 1.00 53.83 C
ATOM 7 C4' G A 28 39.368 -4.649 38.975 1.00 62.30 C
ATOM 8 O4' G A 28 39.048 -3.234 39.029 1.00 60.86 O
ATOM 9 C3' G A 28 40.742 -4.695 38.319 1.00 60.19 C
ATOM 10 O3' G A 28 41.038 -5.947 37.705 1.00 57.67 O
ATOM 11 C2' G A 28 40.627 -3.565 37.308 1.00 54.74 C
ATOM 12 O2' G A 28 39.829 -3.919 36.198 1.00 58.03 O
ATOM 13 C1' G A 28 39.862 -2.527 38.117 1.00 56.38 C
ATOM 14 N9 G A 28 40.792 -1.698 38.872 1.00 55.77 N
ATOM 15 C8 G A 28 41.183 -1.838 40.183 1.00 55.20 C
ATOM 16 N7 G A 28 42.056 -0.941 40.556 1.00 52.71 N
ATOM 17 C5 G A 28 42.234 -0.153 39.425 1.00 55.26 C
ATOM 18 C6 G A 28 43.050 0.983 39.212 1.00 53.85 C
ATOM 19 O6 G A 28 43.776 1.571 40.019 1.00 54.65 O
ATOM 20 N1 G A 28 42.960 1.436 37.895 1.00 55.90 N
ATOM 21 C2 G A 28 42.171 0.877 36.919 1.00 57.96 C
ATOM 22 N2 G A 28 42.240 1.411 35.685 1.00 59.57 N
ATOM 23 N3 G A 28 41.380 -0.145 37.124 1.00 56.01 N
ATOM 24 C4 G A 28 41.467 -0.614 38.382 1.00 53.57 C
ATOM 25 P A A 29 42.564 -6.445 37.593 1.00 58.12 P
ATOM 26 OP1 A A 29 42.459 -7.692 36.798 1.00 62.77 O
ATOM 27 OP2 A A 29 43.224 -6.445 38.922 1.00 56.83 O
ATOM 28 O5' A A 29 43.291 -5.343 36.708 1.00 53.71 O
TER
ATOM 1 O3' C B 1 43.101 8.718 33.394 1.00 50.83 O
ATOM 2 P G B 2 41.638 9.103 33.902 1.00 55.60 P
ATOM 3 OP1 G B 2 41.154 10.104 32.929 1.00 58.85 O
ATOM 4 OP2 G B 2 41.758 9.446 35.342 1.00 53.61 O
ATOM 5 O5' G B 2 40.760 7.782 33.760 1.00 57.75 O
ATOM 6 C5' G B 2 40.515 7.149 32.500 1.00 55.82 C
ATOM 7 C4' G B 2 39.813 5.830 32.733 1.00 59.89 C
ATOM 8 O4' G B 2 40.667 4.977 33.530 1.00 62.08 O
ATOM 9 C3' G B 2 38.530 5.929 33.534 1.00 60.58 C
ATOM 10 O3' G B 2 37.445 6.143 32.645 1.00 59.30 O
ATOM 11 C2' G B 2 38.425 4.549 34.167 1.00 59.11 C
ATOM 12 O2' G B 2 37.929 3.581 33.279 1.00 56.94 O
ATOM 13 C1' G B 2 39.888 4.232 34.440 1.00 56.09 C
ATOM 14 N9 G B 2 40.354 4.554 35.779 1.00 57.73 N
ATOM 15 C8 G B 2 41.190 5.584 36.133 1.00 58.90 C
ATOM 16 N7 G B 2 41.513 5.572 37.399 1.00 58.46 N
ATOM 17 C5 G B 2 40.832 4.478 37.914 1.00 56.71 C
ATOM 18 C6 G B 2 40.812 3.940 39.227 1.00 57.93 C
ATOM 19 O6 G B 2 41.416 4.334 40.229 1.00 57.70 O
ATOM 20 N1 G B 2 39.994 2.818 39.308 1.00 56.77 N
ATOM 21 C2 G B 2 39.295 2.272 38.260 1.00 57.27 C
ATOM 22 N2 G B 2 38.573 1.175 38.527 1.00 54.08 N
ATOM 23 N3 G B 2 39.307 2.759 37.034 1.00 58.00 N
ATOM 24 C4 G B 2 40.092 3.853 36.931 1.00 57.29 C
ATOM 25 P U B 3 36.091 6.794 33.188 1.00 61.36 P
ATOM 26 OP1 U B 3 35.122 6.852 32.061 1.00 65.78 O
ATOM 27 OP2 U B 3 36.471 8.035 33.912 1.00 62.47 O
ATOM 28 O5' U B 3 35.536 5.734 34.227 1.00 65.38 O
TER
ATOM 2 P G A 28 40.452 -5.379 42.667 1.00 58.21 P
ATOM 3 OP1 G A 28 40.366 -6.858 42.644 1.00 63.99 O
ATOM 4 OP2 G A 28 41.603 -4.707 43.329 1.00 57.74 O
ATOM 5 O5' G A 28 40.359 -4.878 41.165 1.00 56.63 O
ATOM 6 C5' G A 28 39.250 -5.248 40.360 1.00 53.83 C
ATOM 7 C4' G A 28 39.368 -4.649 38.975 1.00 62.30 C
ATOM 8 O4' G A 28 39.048 -3.234 39.029 1.00 60.86 O
ATOM 9 C3' G A 28 40.742 -4.695 38.319 1.00 60.19 C
ATOM 10 O3' G A 28 41.038 -5.947 37.705 1.00 57.67 O
ATOM 11 C2' G A 28 40.627 -3.565 37.308 1.00 54.74 C
ATOM 12 O2' G A 28 39.829 -3.919 36.198 1.00 58.03 O
ATOM 13 C1' G A 28 39.862 -2.527 38.117 1.00 56.38 C
ATOM 14 N9 G A 28 40.792 -1.698 38.872 1.00 55.77 N
ATOM 15 C8 G A 28 41.183 -1.838 40.183 1.00 55.20 C
ATOM 16 N7 G A 28 42.056 -0.941 40.556 1.00 52.71 N
ATOM 17 C5 G A 28 42.234 -0.153 39.425 1.00 55.26 C
ATOM 18 C6 G A 28 43.050 0.983 39.212 1.00 53.85 C
ATOM 19 O6 G A 28 43.776 1.571 40.019 1.00 54.65 O
ATOM 20 N1 G A 28 42.960 1.436 37.895 1.00 55.90 N
ATOM 21 C2 G A 28 42.171 0.877 36.919 1.00 57.96 C
ATOM 22 N2 G A 28 42.240 1.411 35.685 1.00 59.57 N
ATOM 23 N3 G A 28 41.380 -0.145 37.124 1.00 56.01 N
ATOM 24 C4 G A 28 41.467 -0.614 38.382 1.00 53.57 C
ATOM 25 P A A 29 42.564 -6.445 37.593 1.00 58.12 P
ATOM 26 OP1 A A 29 42.459 -7.692 36.798 1.00 62.77 O
ATOM 27 OP2 A A 29 43.224 -6.445 38.922 1.00 56.83 O
ATOM 28 O5' A A 29 43.291 -5.343 36.708 1.00 53.71 O
TER
ATOM 1 O3' C B 1 43.101 8.718 33.394 1.00 50.83 O
ATOM 2 P G B 2 41.638 9.103 33.902 1.00 55.60 P
ATOM 3 OP1 G B 2 41.154 10.104 32.929 1.00 58.85 O
ATOM 4 OP2 G B 2 41.758 9.446 35.342 1.00 53.61 O
ATOM 5 O5' G B 2 40.760 7.782 33.760 1.00 57.75 O
ATOM 6 C5' G B 2 40.515 7.149 32.500 1.00 55.82 C
ATOM 7 C4' G B 2 39.813 5.830 32.733 1.00 59.89 C
ATOM 8 O4' G B 2 40.667 4.977 33.530 1.00 62.08 O
ATOM 9 C3' G B 2 38.530 5.929 33.534 1.00 60.58 C
ATOM 10 O3' G B 2 37.445 6.143 32.645 1.00 59.30 O
ATOM 11 C2' G B 2 38.425 4.549 34.167 1.00 59.11 C
ATOM 12 O2' G B 2 37.929 3.581 33.279 1.00 56.94 O
ATOM 13 C1' G B 2 39.888 4.232 34.440 1.00 56.09 C
ATOM 14 N9 G B 2 40.354 4.554 35.779 1.00 57.73 N
ATOM 15 C8 G B 2 41.190 5.584 36.133 1.00 58.90 C
ATOM 16 N7 G B 2 41.513 5.572 37.399 1.00 58.46 N
ATOM 17 C5 G B 2 40.832 4.478 37.914 1.00 56.71 C
ATOM 18 C6 G B 2 40.812 3.940 39.227 1.00 57.93 C
ATOM 19 O6 G B 2 41.416 4.334 40.229 1.00 57.70 O
ATOM 20 N1 G B 2 39.994 2.818 39.308 1.00 56.77 N
ATOM 21 C2 G B 2 39.295 2.272 38.260 1.00 57.27 C
ATOM 22 N2 G B 2 38.573 1.175 38.527 1.00 54.08 N
ATOM 23 N3 G B 2 39.307 2.759 37.034 1.00 58.00 N
ATOM 24 C4 G B 2 40.092 3.853 36.931 1.00 57.29 C
ATOM 25 P U B 3 36.091 6.794 33.188 1.00 61.36 P
ATOM 26 OP1 U B 3 35.122 6.852 32.061 1.00 65.78 O
ATOM 27 OP2 U B 3 36.471 8.035 33.912 1.00 62.47 O
ATOM 28 O5' U B 3 35.536 5.734 34.227 1.00 65.38 O
TER
Atoms:
OP1: (40.366,-6.858,42.644)
OP2: (41.603,-4.707,43.329)
C3': (40.742,-4.695,38.319)
C1': (39.862,-2.527,38.117)
C5': (39.250,-5.248,40.360)
O6: (43.776,1.571,40.019)
O4': (39.048,-3.234,39.029)
C8: (41.183,-1.838,40.183)
C2: (42.171,0.877,36.919)
C6: (43.050,0.983,39.212)
C5: (42.234,-0.153,39.425)
C4: (41.467,-0.614,38.382)
P: (40.452,-5.379,42.667)
C4': (39.368,-4.649,38.975)
C2': (40.627,-3.565,37.308)
O2': (39.829,-3.919,36.198)
N1: (42.960,1.436,37.895)
N2: (42.240,1.411,35.685)
N3: (41.380,-0.145,37.124)
N7: (42.056,-0.941,40.556)
N9: (40.792,-1.698,38.872)
O5': (40.359,-4.878,41.165)
O3': (41.038,-5.947,37.705)
OP2: (41.603,-4.707,43.329)
C3': (40.742,-4.695,38.319)
C1': (39.862,-2.527,38.117)
C5': (39.250,-5.248,40.360)
O6: (43.776,1.571,40.019)
O4': (39.048,-3.234,39.029)
C8: (41.183,-1.838,40.183)
C2: (42.171,0.877,36.919)
C6: (43.050,0.983,39.212)
C5: (42.234,-0.153,39.425)
C4: (41.467,-0.614,38.382)
P: (40.452,-5.379,42.667)
C4': (39.368,-4.649,38.975)
C2': (40.627,-3.565,37.308)
O2': (39.829,-3.919,36.198)
N1: (42.960,1.436,37.895)
N2: (42.240,1.411,35.685)
N3: (41.380,-0.145,37.124)
N7: (42.056,-0.941,40.556)
N9: (40.792,-1.698,38.872)
O5': (40.359,-4.878,41.165)
O3': (41.038,-5.947,37.705)
OP1: (41.154,10.104,32.929)
OP2: (41.758,9.446,35.342)
C3': (38.530,5.929,33.534)
C1': (39.888,4.232,34.440)
C5': (40.515,7.149,32.500)
O6: (41.416,4.334,40.229)
O4': (40.667,4.977,33.530)
C8: (41.190,5.584,36.133)
C2: (39.295,2.272,38.260)
C6: (40.812,3.940,39.227)
C5: (40.832,4.478,37.914)
C4: (40.092,3.853,36.931)
P: (41.638,9.103,33.902)
C4': (39.813,5.830,32.733)
C2': (38.425,4.549,34.167)
O2': (37.929,3.581,33.279)
N1: (39.994,2.818,39.308)
N2: (38.573,1.175,38.527)
N3: (39.307,2.759,37.034)
N7: (41.513,5.572,37.399)
N9: (40.354,4.554,35.779)
O5': (40.760,7.782,33.760)
O3': (37.445,6.143,32.645)
OP2: (41.758,9.446,35.342)
C3': (38.530,5.929,33.534)
C1': (39.888,4.232,34.440)
C5': (40.515,7.149,32.500)
O6: (41.416,4.334,40.229)
O4': (40.667,4.977,33.530)
C8: (41.190,5.584,36.133)
C2: (39.295,2.272,38.260)
C6: (40.812,3.940,39.227)
C5: (40.832,4.478,37.914)
C4: (40.092,3.853,36.931)
P: (41.638,9.103,33.902)
C4': (39.813,5.830,32.733)
C2': (38.425,4.549,34.167)
O2': (37.929,3.581,33.279)
N1: (39.994,2.818,39.308)
N2: (38.573,1.175,38.527)
N3: (39.307,2.759,37.034)
N7: (41.513,5.572,37.399)
N9: (40.354,4.554,35.779)
O5': (40.760,7.782,33.760)
O3': (37.445,6.143,32.645)
Image (generated by PyMOL):