Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:X8:X46
Extra
PDB:
ATOM 1 O3' U A 7 123.389 -10.988 -8.917 1.00 85.35 O
ATOM 2 P G A 8 122.739 -10.266 -7.629 1.00 86.80 P
ATOM 3 OP1 G A 8 122.828 -11.216 -6.478 1.00 85.65 O
ATOM 4 OP2 G A 8 121.410 -9.690 -8.006 1.00 86.77 O
ATOM 5 O5' G A 8 123.738 -9.070 -7.298 1.00 85.87 O
ATOM 6 C5' G A 8 124.024 -8.049 -8.245 1.00 84.25 C
ATOM 7 C4' G A 8 125.112 -7.160 -7.708 1.00 83.34 C
ATOM 8 O4' G A 8 125.740 -6.459 -8.803 1.00 84.82 O
ATOM 9 C3' G A 8 124.719 -6.128 -6.656 1.00 83.62 C
ATOM 10 O3' G A 8 125.616 -6.186 -5.549 1.00 81.54 O
ATOM 11 C2' G A 8 124.797 -4.797 -7.421 1.00 86.09 C
ATOM 12 O2' G A 8 125.217 -3.673 -6.663 1.00 86.07 O
ATOM 13 C1' G A 8 125.838 -5.088 -8.503 1.00 87.62 C
ATOM 14 N9 G A 8 125.617 -4.344 -9.743 1.00 90.62 N
ATOM 15 C8 G A 8 124.412 -3.888 -10.229 1.00 92.28 C
ATOM 16 N7 G A 8 124.522 -3.241 -11.360 1.00 93.38 N
ATOM 17 C5 G A 8 125.880 -3.271 -11.647 1.00 93.34 C
ATOM 18 C6 G A 8 126.596 -2.728 -12.750 1.00 93.91 C
ATOM 19 O6 G A 8 126.150 -2.091 -13.721 1.00 93.83 O
ATOM 20 N1 G A 8 127.965 -2.990 -12.652 1.00 94.43 N
ATOM 21 C2 G A 8 128.568 -3.689 -11.626 1.00 94.18 C
ATOM 22 N2 G A 8 129.905 -3.835 -11.714 1.00 93.89 N
ATOM 23 N3 G A 8 127.908 -4.205 -10.592 1.00 93.35 N
ATOM 24 C4 G A 8 126.576 -3.955 -10.665 1.00 92.60 C
ATOM 25 P G A 9 125.174 -6.955 -4.193 1.00 80.26 P
ATOM 26 OP1 G A 9 126.405 -7.201 -3.392 1.00 79.84 O
ATOM 27 OP2 G A 9 124.323 -8.102 -4.592 1.00 80.45 O
ATOM 28 O5' G A 9 124.247 -5.937 -3.371 1.00 78.80 O
TER
ATOM 1 O3' G B 45 132.135 -4.832 -6.442 1.00102.38 O
ATOM 2 P G B 46 132.470 -6.059 -7.444 1.00107.12 P
ATOM 3 OP1 G B 46 133.029 -7.176 -6.631 1.00106.76 O
ATOM 4 OP2 G B 46 133.254 -5.520 -8.594 1.00106.49 O
ATOM 5 O5' G B 46 131.049 -6.497 -8.027 1.00108.71 O
ATOM 6 C5' G B 46 129.977 -6.848 -7.156 1.00112.28 C
ATOM 7 C4' G B 46 129.001 -7.762 -7.857 1.00114.43 C
ATOM 8 O4' G B 46 128.225 -7.025 -8.835 1.00114.97 O
ATOM 9 C3' G B 46 129.610 -8.898 -8.659 1.00115.72 C
ATOM 10 O3' G B 46 130.021 -9.982 -7.843 1.00117.76 O
ATOM 11 C2' G B 46 128.500 -9.258 -9.641 1.00115.17 C
ATOM 12 O2' G B 46 127.529 -10.150 -9.121 1.00114.20 O
ATOM 13 C1' G B 46 127.867 -7.889 -9.904 1.00114.87 C
ATOM 14 N9 G B 46 128.305 -7.296 -11.163 1.00113.98 N
ATOM 15 C8 G B 46 129.596 -7.039 -11.556 1.00113.71 C
ATOM 16 N7 G B 46 129.675 -6.539 -12.757 1.00113.39 N
ATOM 17 C5 G B 46 128.356 -6.451 -13.181 1.00113.69 C
ATOM 18 C6 G B 46 127.811 -5.982 -14.410 1.00113.92 C
ATOM 19 O6 G B 46 128.411 -5.551 -15.408 1.00113.42 O
ATOM 20 N1 G B 46 126.420 -6.057 -14.413 1.00113.92 N
ATOM 21 C2 G B 46 125.650 -6.531 -13.376 1.00113.68 C
ATOM 22 N2 G B 46 124.321 -6.528 -13.572 1.00113.66 N
ATOM 23 N3 G B 46 126.147 -6.976 -12.231 1.00113.60 N
ATOM 24 C4 G B 46 127.497 -6.906 -12.204 1.00113.72 C
ATOM 25 P U B 47 131.586 -10.338 -7.747 1.00119.36 P
ATOM 26 OP1 U B 47 131.999 -10.092 -6.337 1.00119.25 O
ATOM 27 OP2 U B 47 132.295 -9.636 -8.861 1.00118.23 O
ATOM 28 O5' U B 47 131.656 -11.905 -8.040 1.00118.37 O
TER
ATOM 2 P G A 8 122.739 -10.266 -7.629 1.00 86.80 P
ATOM 3 OP1 G A 8 122.828 -11.216 -6.478 1.00 85.65 O
ATOM 4 OP2 G A 8 121.410 -9.690 -8.006 1.00 86.77 O
ATOM 5 O5' G A 8 123.738 -9.070 -7.298 1.00 85.87 O
ATOM 6 C5' G A 8 124.024 -8.049 -8.245 1.00 84.25 C
ATOM 7 C4' G A 8 125.112 -7.160 -7.708 1.00 83.34 C
ATOM 8 O4' G A 8 125.740 -6.459 -8.803 1.00 84.82 O
ATOM 9 C3' G A 8 124.719 -6.128 -6.656 1.00 83.62 C
ATOM 10 O3' G A 8 125.616 -6.186 -5.549 1.00 81.54 O
ATOM 11 C2' G A 8 124.797 -4.797 -7.421 1.00 86.09 C
ATOM 12 O2' G A 8 125.217 -3.673 -6.663 1.00 86.07 O
ATOM 13 C1' G A 8 125.838 -5.088 -8.503 1.00 87.62 C
ATOM 14 N9 G A 8 125.617 -4.344 -9.743 1.00 90.62 N
ATOM 15 C8 G A 8 124.412 -3.888 -10.229 1.00 92.28 C
ATOM 16 N7 G A 8 124.522 -3.241 -11.360 1.00 93.38 N
ATOM 17 C5 G A 8 125.880 -3.271 -11.647 1.00 93.34 C
ATOM 18 C6 G A 8 126.596 -2.728 -12.750 1.00 93.91 C
ATOM 19 O6 G A 8 126.150 -2.091 -13.721 1.00 93.83 O
ATOM 20 N1 G A 8 127.965 -2.990 -12.652 1.00 94.43 N
ATOM 21 C2 G A 8 128.568 -3.689 -11.626 1.00 94.18 C
ATOM 22 N2 G A 8 129.905 -3.835 -11.714 1.00 93.89 N
ATOM 23 N3 G A 8 127.908 -4.205 -10.592 1.00 93.35 N
ATOM 24 C4 G A 8 126.576 -3.955 -10.665 1.00 92.60 C
ATOM 25 P G A 9 125.174 -6.955 -4.193 1.00 80.26 P
ATOM 26 OP1 G A 9 126.405 -7.201 -3.392 1.00 79.84 O
ATOM 27 OP2 G A 9 124.323 -8.102 -4.592 1.00 80.45 O
ATOM 28 O5' G A 9 124.247 -5.937 -3.371 1.00 78.80 O
TER
ATOM 1 O3' G B 45 132.135 -4.832 -6.442 1.00102.38 O
ATOM 2 P G B 46 132.470 -6.059 -7.444 1.00107.12 P
ATOM 3 OP1 G B 46 133.029 -7.176 -6.631 1.00106.76 O
ATOM 4 OP2 G B 46 133.254 -5.520 -8.594 1.00106.49 O
ATOM 5 O5' G B 46 131.049 -6.497 -8.027 1.00108.71 O
ATOM 6 C5' G B 46 129.977 -6.848 -7.156 1.00112.28 C
ATOM 7 C4' G B 46 129.001 -7.762 -7.857 1.00114.43 C
ATOM 8 O4' G B 46 128.225 -7.025 -8.835 1.00114.97 O
ATOM 9 C3' G B 46 129.610 -8.898 -8.659 1.00115.72 C
ATOM 10 O3' G B 46 130.021 -9.982 -7.843 1.00117.76 O
ATOM 11 C2' G B 46 128.500 -9.258 -9.641 1.00115.17 C
ATOM 12 O2' G B 46 127.529 -10.150 -9.121 1.00114.20 O
ATOM 13 C1' G B 46 127.867 -7.889 -9.904 1.00114.87 C
ATOM 14 N9 G B 46 128.305 -7.296 -11.163 1.00113.98 N
ATOM 15 C8 G B 46 129.596 -7.039 -11.556 1.00113.71 C
ATOM 16 N7 G B 46 129.675 -6.539 -12.757 1.00113.39 N
ATOM 17 C5 G B 46 128.356 -6.451 -13.181 1.00113.69 C
ATOM 18 C6 G B 46 127.811 -5.982 -14.410 1.00113.92 C
ATOM 19 O6 G B 46 128.411 -5.551 -15.408 1.00113.42 O
ATOM 20 N1 G B 46 126.420 -6.057 -14.413 1.00113.92 N
ATOM 21 C2 G B 46 125.650 -6.531 -13.376 1.00113.68 C
ATOM 22 N2 G B 46 124.321 -6.528 -13.572 1.00113.66 N
ATOM 23 N3 G B 46 126.147 -6.976 -12.231 1.00113.60 N
ATOM 24 C4 G B 46 127.497 -6.906 -12.204 1.00113.72 C
ATOM 25 P U B 47 131.586 -10.338 -7.747 1.00119.36 P
ATOM 26 OP1 U B 47 131.999 -10.092 -6.337 1.00119.25 O
ATOM 27 OP2 U B 47 132.295 -9.636 -8.861 1.00118.23 O
ATOM 28 O5' U B 47 131.656 -11.905 -8.040 1.00118.37 O
TER
Atoms:
OP1: (122.828,-11.216,-6.478)
OP2: (121.410,-9.690,-8.006)
C3': (124.719,-6.128,-6.656)
C1': (125.838,-5.088,-8.503)
C5': (124.024,-8.049,-8.245)
O6: (126.150,-2.091,-13.721)
O4': (125.740,-6.459,-8.803)
C8: (124.412,-3.888,-10.229)
C2: (128.568,-3.689,-11.626)
C6: (126.596,-2.728,-12.750)
C5: (125.880,-3.271,-11.647)
C4: (126.576,-3.955,-10.665)
P: (122.739,-10.266,-7.629)
C4': (125.112,-7.160,-7.708)
C2': (124.797,-4.797,-7.421)
O2': (125.217,-3.673,-6.663)
N1: (127.965,-2.990,-12.652)
N2: (129.905,-3.835,-11.714)
N3: (127.908,-4.205,-10.592)
N7: (124.522,-3.241,-11.360)
N9: (125.617,-4.344,-9.743)
O5': (123.738,-9.070,-7.298)
O3': (125.616,-6.186,-5.549)
OP2: (121.410,-9.690,-8.006)
C3': (124.719,-6.128,-6.656)
C1': (125.838,-5.088,-8.503)
C5': (124.024,-8.049,-8.245)
O6: (126.150,-2.091,-13.721)
O4': (125.740,-6.459,-8.803)
C8: (124.412,-3.888,-10.229)
C2: (128.568,-3.689,-11.626)
C6: (126.596,-2.728,-12.750)
C5: (125.880,-3.271,-11.647)
C4: (126.576,-3.955,-10.665)
P: (122.739,-10.266,-7.629)
C4': (125.112,-7.160,-7.708)
C2': (124.797,-4.797,-7.421)
O2': (125.217,-3.673,-6.663)
N1: (127.965,-2.990,-12.652)
N2: (129.905,-3.835,-11.714)
N3: (127.908,-4.205,-10.592)
N7: (124.522,-3.241,-11.360)
N9: (125.617,-4.344,-9.743)
O5': (123.738,-9.070,-7.298)
O3': (125.616,-6.186,-5.549)
OP1: (133.029,-7.176,-6.631)
OP2: (133.254,-5.520,-8.594)
C3': (129.610,-8.898,-8.659)
C1': (127.867,-7.889,-9.904)
C5': (129.977,-6.848,-7.156)
O6: (128.411,-5.551,-15.408)
O4': (128.225,-7.025,-8.835)
C8: (129.596,-7.039,-11.556)
C2: (125.650,-6.531,-13.376)
C6: (127.811,-5.982,-14.410)
C5: (128.356,-6.451,-13.181)
C4: (127.497,-6.906,-12.204)
P: (132.470,-6.059,-7.444)
C4': (129.001,-7.762,-7.857)
C2': (128.500,-9.258,-9.641)
O2': (127.529,-10.150,-9.121)
N1: (126.420,-6.057,-14.413)
N2: (124.321,-6.528,-13.572)
N3: (126.147,-6.976,-12.231)
N7: (129.675,-6.539,-12.757)
N9: (128.305,-7.296,-11.163)
O5': (131.049,-6.497,-8.027)
O3': (130.021,-9.982,-7.843)
OP2: (133.254,-5.520,-8.594)
C3': (129.610,-8.898,-8.659)
C1': (127.867,-7.889,-9.904)
C5': (129.977,-6.848,-7.156)
O6: (128.411,-5.551,-15.408)
O4': (128.225,-7.025,-8.835)
C8: (129.596,-7.039,-11.556)
C2: (125.650,-6.531,-13.376)
C6: (127.811,-5.982,-14.410)
C5: (128.356,-6.451,-13.181)
C4: (127.497,-6.906,-12.204)
P: (132.470,-6.059,-7.444)
C4': (129.001,-7.762,-7.857)
C2': (128.500,-9.258,-9.641)
O2': (127.529,-10.150,-9.121)
N1: (126.420,-6.057,-14.413)
N2: (124.321,-6.528,-13.572)
N3: (126.147,-6.976,-12.231)
N7: (129.675,-6.539,-12.757)
N9: (128.305,-7.296,-11.163)
O5': (131.049,-6.497,-8.027)
O3': (130.021,-9.982,-7.843)
Image (generated by PyMOL):