ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2BE0:A19:B2

Extra

PDB:
ATOM 1 O3' C A 18 26.167 38.772 -2.994 1.00 66.94 O
ATOM 2 P G A 19 24.682 39.348 -3.190 1.00 74.45 P
ATOM 3 OP1 G A 19 24.803 40.419 -4.206 1.00 62.11 O
ATOM 4 OP2 G A 19 24.061 39.648 -1.874 1.00 62.86 O
ATOM 5 O5' G A 19 23.884 38.145 -3.857 1.00 73.46 O
ATOM 6 C5' G A 19 24.156 37.770 -5.196 1.00 73.25 C
ATOM 7 C4' G A 19 23.127 36.791 -5.679 1.00 73.59 C
ATOM 8 O4' G A 19 23.268 35.546 -4.954 1.00 72.60 O
ATOM 9 C3' G A 19 21.683 37.182 -5.437 1.00 73.86 C
ATOM 10 O3' G A 19 21.240 38.105 -6.426 1.00 76.17 O
ATOM 11 C2' G A 19 20.982 35.833 -5.534 1.00 72.86 C
ATOM 12 O2' G A 19 20.786 35.401 -6.863 1.00 73.93 O
ATOM 13 C1' G A 19 22.005 34.909 -4.872 1.00 71.68 C
ATOM 14 N9 G A 19 21.719 34.622 -3.472 1.00 58.83 N
ATOM 15 C8 G A 19 22.272 35.224 -2.369 1.00 58.93 C
ATOM 16 N7 G A 19 21.823 34.738 -1.243 1.00 57.65 N
ATOM 17 C5 G A 19 20.920 33.761 -1.631 1.00 56.88 C
ATOM 18 C6 G A 19 20.131 32.896 -0.854 1.00 56.76 C
ATOM 19 O6 G A 19 20.063 32.823 0.366 1.00 56.63 O
ATOM 20 N1 G A 19 19.356 32.056 -1.644 1.00 56.70 N
ATOM 21 C2 G A 19 19.341 32.058 -3.015 1.00 57.41 C
ATOM 22 N2 G A 19 18.512 31.180 -3.603 1.00 57.92 N
ATOM 23 N3 G A 19 20.080 32.863 -3.755 1.00 57.39 N
ATOM 24 C4 G A 19 20.841 33.681 -3.002 1.00 57.39 C
ATOM 25 P C A 20 19.791 38.793 -6.286 1.00 83.01 P
ATOM 26 OP1 C A 20 19.750 39.918 -7.257 1.00 73.80 O
ATOM 27 OP2 C A 20 19.529 39.055 -4.851 1.00 75.45 O
ATOM 28 O5' C A 20 18.784 37.660 -6.787 1.00 81.61 O
TER

ATOM 1 O3' C B 1 16.550 24.244 -1.519 1.00 79.80 O
ATOM 2 P G B 2 17.924 23.504 -1.189 1.00 82.62 P
ATOM 3 OP1 G B 2 17.770 22.074 -1.553 1.00 70.18 O
ATOM 4 OP2 G B 2 18.271 23.870 0.202 1.00 69.51 O
ATOM 5 O5' G B 2 18.942 24.211 -2.186 1.00 81.33 O
ATOM 6 C5' G B 2 18.599 24.376 -3.560 1.00 76.54 C
ATOM 7 C4' G B 2 19.417 25.477 -4.188 1.00 73.42 C
ATOM 8 O4' G B 2 19.020 26.772 -3.663 1.00 72.61 O
ATOM 9 C3' G B 2 20.901 25.442 -3.898 1.00 73.70 C
ATOM 10 O3' G B 2 21.586 24.458 -4.657 1.00 74.81 O
ATOM 11 C2' G B 2 21.317 26.862 -4.255 1.00 72.65 C
ATOM 12 O2' G B 2 21.477 27.080 -5.639 1.00 75.15 O
ATOM 13 C1' G B 2 20.124 27.665 -3.732 1.00 70.38 C
ATOM 14 N9 G B 2 20.399 28.188 -2.397 1.00 53.92 N
ATOM 15 C8 G B 2 19.871 27.760 -1.205 1.00 52.98 C
ATOM 16 N7 G B 2 20.349 28.406 -0.176 1.00 53.14 N
ATOM 17 C5 G B 2 21.242 29.317 -0.724 1.00 52.67 C
ATOM 18 C6 G B 2 22.081 30.289 -0.096 1.00 52.46 C
ATOM 19 O6 G B 2 22.208 30.544 1.116 1.00 52.23 O
ATOM 20 N1 G B 2 22.826 30.999 -1.034 1.00 51.39 N
ATOM 21 C2 G B 2 22.775 30.796 -2.391 1.00 50.25 C
ATOM 22 N2 G B 2 23.559 31.572 -3.131 1.00 49.49 N
ATOM 23 N3 G B 2 22.010 29.897 -2.977 1.00 49.56 N
ATOM 24 C4 G B 2 21.276 29.202 -2.093 1.00 51.85 C
ATOM 25 P U B 3 22.906 23.774 -4.042 1.00 67.52 P
ATOM 26 OP1 U B 3 23.429 22.808 -5.041 1.00 70.29 O
ATOM 27 OP2 U B 3 22.547 23.291 -2.689 1.00 69.07 O
ATOM 28 O5' U B 3 23.929 24.994 -3.943 1.00 62.86 O
TER

Atoms:
OP1: (24.803,40.419,-4.206)
OP2: (24.061,39.648,-1.874)
C3': (21.683,37.182,-5.437)
C1': (22.005,34.909,-4.872)
C5': (24.156,37.770,-5.196)
O6: (20.063,32.823,0.366)
O4': (23.268,35.546,-4.954)
C8: (22.272,35.224,-2.369)
C2: (19.341,32.058,-3.015)
C6: (20.131,32.896,-0.854)
C5: (20.920,33.761,-1.631)
C4: (20.841,33.681,-3.002)
P: (24.682,39.348,-3.190)
C4': (23.127,36.791,-5.679)
C2': (20.982,35.833,-5.534)
O2': (20.786,35.401,-6.863)
N1: (19.356,32.056,-1.644)
N2: (18.512,31.180,-3.603)
N3: (20.080,32.863,-3.755)
N7: (21.823,34.738,-1.243)
N9: (21.719,34.622,-3.472)
O5': (23.884,38.145,-3.857)
O3': (21.240,38.105,-6.426)
OP1: (17.770,22.074,-1.553)
OP2: (18.271,23.870,0.202)
C3': (20.901,25.442,-3.898)
C1': (20.124,27.665,-3.732)
C5': (18.599,24.376,-3.560)
O6: (22.208,30.544,1.116)
O4': (19.020,26.772,-3.663)
C8: (19.871,27.760,-1.205)
C2: (22.775,30.796,-2.391)
C6: (22.081,30.289,-0.096)
C5: (21.242,29.317,-0.724)
C4: (21.276,29.202,-2.093)
P: (17.924,23.504,-1.189)
C4': (19.417,25.477,-4.188)
C2': (21.317,26.862,-4.255)
O2': (21.477,27.080,-5.639)
N1: (22.826,30.999,-1.034)
N2: (23.559,31.572,-3.131)
N3: (22.010,29.897,-2.977)
N7: (20.349,28.406,-0.176)
N9: (20.399,28.188,-2.397)
O5': (18.942,24.211,-2.186)
O3': (21.586,24.458,-4.657)
Image (generated by PyMOL):
PyMOL image
show in jmol