ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A131:A132

Extra

PDB:
ATOM 1 O3' G A 130 -1.868 -53.826 -52.666 1.00 85.62 O
ATOM 2 P G A 131 -3.229 -54.243 -53.395 1.00 54.99 P
ATOM 3 OP1 G A 131 -3.758 -55.422 -52.678 1.00127.80 O
ATOM 4 OP2 G A 131 -2.941 -54.354 -54.842 1.00111.78 O
ATOM 5 O5' G A 131 -4.143 -53.004 -53.128 1.00 38.10 O
ATOM 6 C5' G A 131 -4.058 -51.888 -53.970 1.00 48.47 C
ATOM 7 C4' G A 131 -4.633 -50.634 -53.350 1.00 45.06 C
ATOM 8 O4' G A 131 -4.804 -50.764 -51.919 1.00 48.01 O
ATOM 9 C3' G A 131 -3.772 -49.407 -53.489 1.00 45.50 C
ATOM 10 O3' G A 131 -3.839 -48.858 -54.779 1.00 44.45 O
ATOM 11 C2' G A 131 -4.301 -48.484 -52.406 1.00 49.58 C
ATOM 12 O2' G A 131 -5.398 -47.739 -52.892 1.00 55.49 O
ATOM 13 C1' G A 131 -4.807 -49.471 -51.348 1.00 50.39 C
ATOM 14 N9 G A 131 -4.009 -49.437 -50.086 1.00 69.59 N
ATOM 15 C8 G A 131 -3.829 -48.283 -49.339 1.00 77.71 C
ATOM 16 N7 G A 131 -3.144 -48.414 -48.236 1.00 59.58 N
ATOM 17 C5 G A 131 -2.847 -49.767 -48.236 1.00 79.21 C
ATOM 18 C6 G A 131 -2.109 -50.532 -47.285 1.00 92.02 C
ATOM 19 O6 G A 131 -1.580 -50.118 -46.250 1.00 87.73 O
ATOM 20 N1 G A 131 -2.008 -51.889 -47.609 1.00 85.22 N
ATOM 21 C2 G A 131 -2.567 -52.432 -48.732 1.00 85.83 C
ATOM 22 N2 G A 131 -2.379 -53.744 -48.904 1.00 77.58 N
ATOM 23 N3 G A 131 -3.261 -51.732 -49.631 1.00 89.29 N
ATOM 24 C4 G A 131 -3.370 -50.413 -49.343 1.00 74.50 C
ATOM 25 P G A 132 -2.512 -48.717 -55.637 1.00 60.10 P
ATOM 26 OP1 G A 132 -2.905 -48.325 -57.014 1.00 82.61 O
ATOM 27 OP2 G A 132 -1.731 -49.966 -55.446 1.00 62.57 O
ATOM 28 O5' G A 132 -1.807 -47.508 -54.920 1.00 51.25 O
TER

ATOM 1 O3' G B 131 -3.839 -48.858 -54.779 1.00 44.45 O
ATOM 2 P G B 132 -2.512 -48.717 -55.637 1.00 60.10 P
ATOM 3 OP1 G B 132 -2.905 -48.325 -57.014 1.00 82.61 O
ATOM 4 OP2 G B 132 -1.731 -49.966 -55.446 1.00 62.57 O
ATOM 5 O5' G B 132 -1.807 -47.508 -54.920 1.00 51.25 O
ATOM 6 C5' G B 132 -2.558 -46.380 -54.528 1.00 50.60 C
ATOM 7 C4' G B 132 -1.672 -45.350 -53.935 1.00 53.73 C
ATOM 8 O4' G B 132 -1.369 -45.747 -52.578 1.00 60.36 O
ATOM 9 C3' G B 132 -0.343 -45.213 -54.647 1.00 64.96 C
ATOM 10 O3' G B 132 0.115 -43.872 -54.563 1.00 63.71 O
ATOM 11 C2' G B 132 0.571 -46.132 -53.851 1.00 66.17 C
ATOM 12 O2' G B 132 1.941 -45.791 -53.917 1.00 73.04 O
ATOM 13 C1' G B 132 0.012 -45.990 -52.433 1.00 65.31 C
ATOM 14 N9 G B 132 0.162 -47.193 -51.609 1.00 53.83 N
ATOM 15 C8 G B 132 -0.241 -48.446 -51.972 1.00 54.85 C
ATOM 16 N7 G B 132 0.019 -49.353 -51.070 1.00 58.18 N
ATOM 17 C5 G B 132 0.622 -48.662 -50.035 1.00 47.92 C
ATOM 18 C6 G B 132 1.112 -49.123 -48.785 1.00 52.08 C
ATOM 19 O6 G B 132 1.125 -50.263 -48.294 1.00 65.31 O
ATOM 20 N1 G B 132 1.651 -48.098 -48.044 1.00 48.86 N
ATOM 21 C2 G B 132 1.706 -46.805 -48.452 1.00 49.93 C
ATOM 22 N2 G B 132 2.273 -45.988 -47.563 1.00 54.36 N
ATOM 23 N3 G B 132 1.253 -46.351 -49.606 1.00 43.86 N
ATOM 24 C4 G B 132 0.719 -47.328 -50.352 1.00 47.54 C
ATOM 25 P A B 133 0.834 -43.209 -55.826 1.00 52.29 P
ATOM 26 OP1 A B 133 -0.121 -43.254 -56.955 1.00129.17 O
ATOM 27 OP2 A B 133 2.147 -43.880 -55.978 1.00120.96 O
ATOM 28 O5' A B 133 1.048 -41.714 -55.361 1.00 63.44 O
TER

Atoms:
OP1: (-3.758,-55.422,-52.678)
OP2: (-2.941,-54.354,-54.842)
C3': (-3.772,-49.407,-53.489)
C1': (-4.807,-49.471,-51.348)
C5': (-4.058,-51.888,-53.970)
O6: (-1.580,-50.118,-46.250)
O4': (-4.804,-50.764,-51.919)
C8: (-3.829,-48.283,-49.339)
C2: (-2.567,-52.432,-48.732)
C6: (-2.109,-50.532,-47.285)
C5: (-2.847,-49.767,-48.236)
C4: (-3.370,-50.413,-49.343)
P: (-3.229,-54.243,-53.395)
C4': (-4.633,-50.634,-53.350)
C2': (-4.301,-48.484,-52.406)
O2': (-5.398,-47.739,-52.892)
N1: (-2.008,-51.889,-47.609)
N2: (-2.379,-53.744,-48.904)
N3: (-3.261,-51.732,-49.631)
N7: (-3.144,-48.414,-48.236)
N9: (-4.009,-49.437,-50.086)
O5': (-4.143,-53.004,-53.128)
O3': (-3.839,-48.858,-54.779)
OP1: (-2.905,-48.325,-57.014)
OP2: (-1.731,-49.966,-55.446)
C3': (-0.343,-45.213,-54.647)
C1': (0.012,-45.990,-52.433)
C5': (-2.558,-46.380,-54.528)
O6: (1.125,-50.263,-48.294)
O4': (-1.369,-45.747,-52.578)
C8: (-0.241,-48.446,-51.972)
C2: (1.706,-46.805,-48.452)
C6: (1.112,-49.123,-48.785)
C5: (0.622,-48.662,-50.035)
C4: (0.719,-47.328,-50.352)
P: (-2.512,-48.717,-55.637)
C4': (-1.672,-45.350,-53.935)
C2': (0.571,-46.132,-53.851)
O2': (1.941,-45.791,-53.917)
N1: (1.651,-48.098,-48.044)
N2: (2.273,-45.988,-47.563)
N3: (1.253,-46.351,-49.606)
N7: (0.019,-49.353,-51.070)
N9: (0.162,-47.193,-51.609)
O5': (-1.807,-47.508,-54.920)
O3': (0.115,-43.872,-54.563)
Image (generated by PyMOL):
PyMOL image
show in jmol