ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CR1:B28:C2

Extra

PDB:
ATOM 1 O3' C A 27 39.030 -4.432 43.782 1.00 55.93 O
ATOM 2 P G A 28 40.327 -5.063 43.057 1.00 57.84 P
ATOM 3 OP1 G A 28 40.051 -6.518 43.064 1.00 66.22 O
ATOM 4 OP2 G A 28 41.618 -4.559 43.607 1.00 56.10 O
ATOM 5 O5' G A 28 40.238 -4.534 41.557 1.00 51.98 O
ATOM 6 C5' G A 28 39.146 -4.892 40.734 1.00 52.48 C
ATOM 7 C4' G A 28 39.291 -4.278 39.349 1.00 57.66 C
ATOM 8 O4' G A 28 38.981 -2.857 39.425 1.00 59.19 O
ATOM 9 C3' G A 28 40.662 -4.323 38.665 1.00 60.42 C
ATOM 10 O3' G A 28 40.967 -5.545 37.997 1.00 55.09 O
ATOM 11 C2' G A 28 40.529 -3.185 37.672 1.00 56.30 C
ATOM 12 O2' G A 28 39.630 -3.587 36.652 1.00 59.66 O
ATOM 13 C1' G A 28 39.808 -2.139 38.523 1.00 58.74 C
ATOM 14 N9 G A 28 40.751 -1.314 39.286 1.00 56.23 N
ATOM 15 C8 G A 28 41.135 -1.470 40.596 1.00 57.46 C
ATOM 16 N7 G A 28 42.033 -0.596 40.979 1.00 55.59 N
ATOM 17 C5 G A 28 42.232 0.198 39.857 1.00 56.31 C
ATOM 18 C6 G A 28 43.084 1.312 39.659 1.00 55.56 C
ATOM 19 O6 G A 28 43.825 1.864 40.474 1.00 53.00 O
ATOM 20 N1 G A 28 43.020 1.783 38.353 1.00 55.06 N
ATOM 21 C2 G A 28 42.223 1.260 37.371 1.00 59.05 C
ATOM 22 N2 G A 28 42.328 1.805 36.139 1.00 61.11 N
ATOM 23 N3 G A 28 41.389 0.255 37.562 1.00 59.40 N
ATOM 24 C4 G A 28 41.453 -0.232 38.809 1.00 56.74 C
ATOM 25 P A A 29 42.484 -6.096 37.985 1.00 58.54 P
ATOM 26 OP1 A A 29 42.317 -7.428 37.324 1.00 62.72 O
ATOM 27 OP2 A A 29 43.104 -6.028 39.333 1.00 56.87 O
ATOM 28 O5' A A 29 43.294 -5.076 37.056 1.00 52.09 O
TER

ATOM 1 O3' C B 1 43.225 9.036 33.851 1.00 51.84 O
ATOM 2 P G B 2 41.758 9.411 34.335 1.00 58.33 P
ATOM 3 OP1 G B 2 41.259 10.385 33.344 1.00 60.13 O
ATOM 4 OP2 G B 2 41.779 9.740 35.795 1.00 55.64 O
ATOM 5 O5' G B 2 40.878 8.097 34.205 1.00 58.22 O
ATOM 6 C5' G B 2 40.630 7.480 32.950 1.00 57.02 C
ATOM 7 C4' G B 2 39.872 6.198 33.175 1.00 57.76 C
ATOM 8 O4' G B 2 40.693 5.270 33.930 1.00 59.83 O
ATOM 9 C3' G B 2 38.619 6.360 34.007 1.00 59.40 C
ATOM 10 O3' G B 2 37.558 6.666 33.128 1.00 58.18 O
ATOM 11 C2' G B 2 38.442 4.969 34.613 1.00 57.60 C
ATOM 12 O2' G B 2 37.919 4.080 33.678 1.00 52.42 O
ATOM 13 C1' G B 2 39.889 4.564 34.866 1.00 55.24 C
ATOM 14 N9 G B 2 40.383 4.903 36.198 1.00 56.37 N
ATOM 15 C8 G B 2 41.253 5.917 36.523 1.00 56.54 C
ATOM 16 N7 G B 2 41.604 5.910 37.786 1.00 55.93 N
ATOM 17 C5 G B 2 40.901 4.850 38.331 1.00 53.58 C
ATOM 18 C6 G B 2 40.908 4.334 39.640 1.00 53.97 C
ATOM 19 O6 G B 2 41.572 4.717 40.619 1.00 56.15 O
ATOM 20 N1 G B 2 40.061 3.235 39.758 1.00 54.46 N
ATOM 21 C2 G B 2 39.319 2.698 38.732 1.00 54.20 C
ATOM 22 N2 G B 2 38.587 1.634 39.027 1.00 56.85 N
ATOM 23 N3 G B 2 39.305 3.170 37.505 1.00 52.79 N
ATOM 24 C4 G B 2 40.118 4.234 37.371 1.00 55.20 C
ATOM 25 P U B 3 36.220 7.314 33.706 1.00 61.76 P
ATOM 26 OP1 U B 3 35.282 7.480 32.566 1.00 62.97 O
ATOM 27 OP2 U B 3 36.641 8.483 34.500 1.00 64.46 O
ATOM 28 O5' U B 3 35.628 6.219 34.701 1.00 62.43 O
TER

Atoms:
OP1: (40.051,-6.518,43.064)
OP2: (41.618,-4.559,43.607)
C3': (40.662,-4.323,38.665)
C1': (39.808,-2.139,38.523)
C5': (39.146,-4.892,40.734)
O6: (43.825,1.864,40.474)
O4': (38.981,-2.857,39.425)
C8: (41.135,-1.470,40.596)
C2: (42.223,1.260,37.371)
C6: (43.084,1.312,39.659)
C5: (42.232,0.198,39.857)
C4: (41.453,-0.232,38.809)
P: (40.327,-5.063,43.057)
C4': (39.291,-4.278,39.349)
C2': (40.529,-3.185,37.672)
O2': (39.630,-3.587,36.652)
N1: (43.020,1.783,38.353)
N2: (42.328,1.805,36.139)
N3: (41.389,0.255,37.562)
N7: (42.033,-0.596,40.979)
N9: (40.751,-1.314,39.286)
O5': (40.238,-4.534,41.557)
O3': (40.967,-5.545,37.997)
OP1: (41.259,10.385,33.344)
OP2: (41.779,9.740,35.795)
C3': (38.619,6.360,34.007)
C1': (39.889,4.564,34.866)
C5': (40.630,7.480,32.950)
O6: (41.572,4.717,40.619)
O4': (40.693,5.270,33.930)
C8: (41.253,5.917,36.523)
C2: (39.319,2.698,38.732)
C6: (40.908,4.334,39.640)
C5: (40.901,4.850,38.331)
C4: (40.118,4.234,37.371)
P: (41.758,9.411,34.335)
C4': (39.872,6.198,33.175)
C2': (38.442,4.969,34.613)
O2': (37.919,4.080,33.678)
N1: (40.061,3.235,39.758)
N2: (38.587,1.634,39.027)
N3: (39.305,3.170,37.505)
N7: (41.604,5.910,37.786)
N9: (40.383,4.903,36.198)
O5': (40.878,8.097,34.205)
O3': (37.558,6.666,33.128)
Image (generated by PyMOL):
PyMOL image
show in jmol