Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:071:084
Extra
PDB:
ATOM 1 O3' A A 70 27.466 160.335 25.672 1.00 60.28 O
ATOM 2 P G A 71 26.529 160.039 26.944 1.00 62.12 P
ATOM 3 OP1 G A 71 25.363 159.227 26.490 1.00 61.36 O
ATOM 4 OP2 G A 71 26.304 161.328 27.645 1.00 59.86 O
ATOM 5 O5' G A 71 27.418 159.104 27.882 1.00 61.52 O
ATOM 6 C5' G A 71 28.537 159.628 28.636 1.00 58.56 C
ATOM 7 C4' G A 71 29.833 159.292 27.931 1.00 57.69 C
ATOM 8 O4' G A 71 29.931 160.092 26.717 1.00 56.18 O
ATOM 9 C3' G A 71 31.123 159.602 28.677 1.00 56.89 C
ATOM 10 O3' G A 71 31.483 158.588 29.608 1.00 57.98 O
ATOM 11 C2' G A 71 32.103 159.761 27.528 1.00 54.43 C
ATOM 12 O2' G A 71 32.423 158.527 26.916 1.00 52.63 O
ATOM 13 C1' G A 71 31.251 160.592 26.573 1.00 53.61 C
ATOM 14 N9 G A 71 31.253 162.000 26.972 1.00 51.75 N
ATOM 15 C8 G A 71 30.199 162.742 27.459 1.00 49.59 C
ATOM 16 N7 G A 71 30.535 163.966 27.768 1.00 47.77 N
ATOM 17 C5 G A 71 31.886 164.038 27.461 1.00 49.27 C
ATOM 18 C6 G A 71 32.798 165.109 27.592 1.00 50.64 C
ATOM 19 O6 G A 71 32.589 166.249 28.025 1.00 54.79 O
ATOM 20 N1 G A 71 34.073 164.753 27.160 1.00 50.40 N
ATOM 21 C2 G A 71 34.424 163.520 26.663 1.00 50.95 C
ATOM 22 N2 G A 71 35.710 163.360 26.294 1.00 50.21 N
ATOM 23 N3 G A 71 33.580 162.514 26.538 1.00 49.66 N
ATOM 24 C4 G A 71 32.340 162.840 26.954 1.00 50.18 C
ATOM 25 P C A 72 31.916 159.004 31.102 1.00 57.18 P
ATOM 26 OP1 C A 72 31.664 157.829 31.970 1.00 56.89 O
ATOM 27 OP2 C A 72 31.271 160.304 31.426 1.00 56.28 O
ATOM 28 O5' C A 72 33.488 159.238 30.984 1.00 55.91 O
TER
ATOM 1 O3' C B 83 40.614 168.589 23.282 1.00 66.14 O
ATOM 2 P G B 84 39.623 169.005 22.082 1.00 67.63 P
ATOM 3 OP1 G B 84 40.432 169.058 20.836 1.00 67.95 O
ATOM 4 OP2 G B 84 38.819 170.190 22.496 1.00 66.36 O
ATOM 5 O5' G B 84 38.624 167.773 21.971 1.00 66.65 O
ATOM 6 C5' G B 84 39.117 166.475 21.626 1.00 67.00 C
ATOM 7 C4' G B 84 37.992 165.479 21.621 1.00 67.03 C
ATOM 8 O4' G B 84 37.456 165.349 22.962 1.00 64.48 O
ATOM 9 C3' G B 84 36.774 165.867 20.806 1.00 68.47 C
ATOM 10 O3' G B 84 36.963 165.677 19.409 1.00 74.14 O
ATOM 11 C2' G B 84 35.716 164.959 21.410 1.00 64.64 C
ATOM 12 O2' G B 84 35.880 163.610 21.021 1.00 63.39 O
ATOM 13 C1' G B 84 36.068 165.076 22.890 1.00 62.10 C
ATOM 14 N9 G B 84 35.352 166.177 23.521 1.00 58.40 N
ATOM 15 C8 G B 84 35.831 167.428 23.826 1.00 57.88 C
ATOM 16 N7 G B 84 34.935 168.193 24.389 1.00 56.57 N
ATOM 17 C5 G B 84 33.801 167.396 24.455 1.00 55.42 C
ATOM 18 C6 G B 84 32.510 167.677 24.960 1.00 55.87 C
ATOM 19 O6 G B 84 32.086 168.726 25.465 1.00 57.92 O
ATOM 20 N1 G B 84 31.666 166.579 24.835 1.00 55.47 N
ATOM 21 C2 G B 84 32.019 165.371 24.291 1.00 55.23 C
ATOM 22 N2 G B 84 31.070 164.430 24.272 1.00 54.83 N
ATOM 23 N3 G B 84 33.213 165.104 23.805 1.00 55.06 N
ATOM 24 C4 G B 84 34.048 166.151 23.922 1.00 55.98 C
ATOM 25 P A B 85 36.636 166.884 18.392 1.00 76.10 P
ATOM 26 OP1 A B 85 37.934 167.495 17.987 1.00 74.59 O
ATOM 27 OP2 A B 85 35.570 167.742 19.000 1.00 74.91 O
ATOM 28 O5' A B 85 35.993 166.143 17.137 1.00 78.14 O
TER
ATOM 2 P G A 71 26.529 160.039 26.944 1.00 62.12 P
ATOM 3 OP1 G A 71 25.363 159.227 26.490 1.00 61.36 O
ATOM 4 OP2 G A 71 26.304 161.328 27.645 1.00 59.86 O
ATOM 5 O5' G A 71 27.418 159.104 27.882 1.00 61.52 O
ATOM 6 C5' G A 71 28.537 159.628 28.636 1.00 58.56 C
ATOM 7 C4' G A 71 29.833 159.292 27.931 1.00 57.69 C
ATOM 8 O4' G A 71 29.931 160.092 26.717 1.00 56.18 O
ATOM 9 C3' G A 71 31.123 159.602 28.677 1.00 56.89 C
ATOM 10 O3' G A 71 31.483 158.588 29.608 1.00 57.98 O
ATOM 11 C2' G A 71 32.103 159.761 27.528 1.00 54.43 C
ATOM 12 O2' G A 71 32.423 158.527 26.916 1.00 52.63 O
ATOM 13 C1' G A 71 31.251 160.592 26.573 1.00 53.61 C
ATOM 14 N9 G A 71 31.253 162.000 26.972 1.00 51.75 N
ATOM 15 C8 G A 71 30.199 162.742 27.459 1.00 49.59 C
ATOM 16 N7 G A 71 30.535 163.966 27.768 1.00 47.77 N
ATOM 17 C5 G A 71 31.886 164.038 27.461 1.00 49.27 C
ATOM 18 C6 G A 71 32.798 165.109 27.592 1.00 50.64 C
ATOM 19 O6 G A 71 32.589 166.249 28.025 1.00 54.79 O
ATOM 20 N1 G A 71 34.073 164.753 27.160 1.00 50.40 N
ATOM 21 C2 G A 71 34.424 163.520 26.663 1.00 50.95 C
ATOM 22 N2 G A 71 35.710 163.360 26.294 1.00 50.21 N
ATOM 23 N3 G A 71 33.580 162.514 26.538 1.00 49.66 N
ATOM 24 C4 G A 71 32.340 162.840 26.954 1.00 50.18 C
ATOM 25 P C A 72 31.916 159.004 31.102 1.00 57.18 P
ATOM 26 OP1 C A 72 31.664 157.829 31.970 1.00 56.89 O
ATOM 27 OP2 C A 72 31.271 160.304 31.426 1.00 56.28 O
ATOM 28 O5' C A 72 33.488 159.238 30.984 1.00 55.91 O
TER
ATOM 1 O3' C B 83 40.614 168.589 23.282 1.00 66.14 O
ATOM 2 P G B 84 39.623 169.005 22.082 1.00 67.63 P
ATOM 3 OP1 G B 84 40.432 169.058 20.836 1.00 67.95 O
ATOM 4 OP2 G B 84 38.819 170.190 22.496 1.00 66.36 O
ATOM 5 O5' G B 84 38.624 167.773 21.971 1.00 66.65 O
ATOM 6 C5' G B 84 39.117 166.475 21.626 1.00 67.00 C
ATOM 7 C4' G B 84 37.992 165.479 21.621 1.00 67.03 C
ATOM 8 O4' G B 84 37.456 165.349 22.962 1.00 64.48 O
ATOM 9 C3' G B 84 36.774 165.867 20.806 1.00 68.47 C
ATOM 10 O3' G B 84 36.963 165.677 19.409 1.00 74.14 O
ATOM 11 C2' G B 84 35.716 164.959 21.410 1.00 64.64 C
ATOM 12 O2' G B 84 35.880 163.610 21.021 1.00 63.39 O
ATOM 13 C1' G B 84 36.068 165.076 22.890 1.00 62.10 C
ATOM 14 N9 G B 84 35.352 166.177 23.521 1.00 58.40 N
ATOM 15 C8 G B 84 35.831 167.428 23.826 1.00 57.88 C
ATOM 16 N7 G B 84 34.935 168.193 24.389 1.00 56.57 N
ATOM 17 C5 G B 84 33.801 167.396 24.455 1.00 55.42 C
ATOM 18 C6 G B 84 32.510 167.677 24.960 1.00 55.87 C
ATOM 19 O6 G B 84 32.086 168.726 25.465 1.00 57.92 O
ATOM 20 N1 G B 84 31.666 166.579 24.835 1.00 55.47 N
ATOM 21 C2 G B 84 32.019 165.371 24.291 1.00 55.23 C
ATOM 22 N2 G B 84 31.070 164.430 24.272 1.00 54.83 N
ATOM 23 N3 G B 84 33.213 165.104 23.805 1.00 55.06 N
ATOM 24 C4 G B 84 34.048 166.151 23.922 1.00 55.98 C
ATOM 25 P A B 85 36.636 166.884 18.392 1.00 76.10 P
ATOM 26 OP1 A B 85 37.934 167.495 17.987 1.00 74.59 O
ATOM 27 OP2 A B 85 35.570 167.742 19.000 1.00 74.91 O
ATOM 28 O5' A B 85 35.993 166.143 17.137 1.00 78.14 O
TER
Atoms:
OP1: (25.363,159.227,26.490)
OP2: (26.304,161.328,27.645)
C3': (31.123,159.602,28.677)
C1': (31.251,160.592,26.573)
C5': (28.537,159.628,28.636)
O6: (32.589,166.249,28.025)
O4': (29.931,160.092,26.717)
C8: (30.199,162.742,27.459)
C2: (34.424,163.520,26.663)
C6: (32.798,165.109,27.592)
C5: (31.886,164.038,27.461)
C4: (32.340,162.840,26.954)
P: (26.529,160.039,26.944)
C4': (29.833,159.292,27.931)
C2': (32.103,159.761,27.528)
O2': (32.423,158.527,26.916)
N1: (34.073,164.753,27.160)
N2: (35.710,163.360,26.294)
N3: (33.580,162.514,26.538)
N7: (30.535,163.966,27.768)
N9: (31.253,162.000,26.972)
O5': (27.418,159.104,27.882)
O3': (31.483,158.588,29.608)
OP2: (26.304,161.328,27.645)
C3': (31.123,159.602,28.677)
C1': (31.251,160.592,26.573)
C5': (28.537,159.628,28.636)
O6: (32.589,166.249,28.025)
O4': (29.931,160.092,26.717)
C8: (30.199,162.742,27.459)
C2: (34.424,163.520,26.663)
C6: (32.798,165.109,27.592)
C5: (31.886,164.038,27.461)
C4: (32.340,162.840,26.954)
P: (26.529,160.039,26.944)
C4': (29.833,159.292,27.931)
C2': (32.103,159.761,27.528)
O2': (32.423,158.527,26.916)
N1: (34.073,164.753,27.160)
N2: (35.710,163.360,26.294)
N3: (33.580,162.514,26.538)
N7: (30.535,163.966,27.768)
N9: (31.253,162.000,26.972)
O5': (27.418,159.104,27.882)
O3': (31.483,158.588,29.608)
OP1: (40.432,169.058,20.836)
OP2: (38.819,170.190,22.496)
C3': (36.774,165.867,20.806)
C1': (36.068,165.076,22.890)
C5': (39.117,166.475,21.626)
O6: (32.086,168.726,25.465)
O4': (37.456,165.349,22.962)
C8: (35.831,167.428,23.826)
C2: (32.019,165.371,24.291)
C6: (32.510,167.677,24.960)
C5: (33.801,167.396,24.455)
C4: (34.048,166.151,23.922)
P: (39.623,169.005,22.082)
C4': (37.992,165.479,21.621)
C2': (35.716,164.959,21.410)
O2': (35.880,163.610,21.021)
N1: (31.666,166.579,24.835)
N2: (31.070,164.430,24.272)
N3: (33.213,165.104,23.805)
N7: (34.935,168.193,24.389)
N9: (35.352,166.177,23.521)
O5': (38.624,167.773,21.971)
O3': (36.963,165.677,19.409)
OP2: (38.819,170.190,22.496)
C3': (36.774,165.867,20.806)
C1': (36.068,165.076,22.890)
C5': (39.117,166.475,21.626)
O6: (32.086,168.726,25.465)
O4': (37.456,165.349,22.962)
C8: (35.831,167.428,23.826)
C2: (32.019,165.371,24.291)
C6: (32.510,167.677,24.960)
C5: (33.801,167.396,24.455)
C4: (34.048,166.151,23.922)
P: (39.623,169.005,22.082)
C4': (37.992,165.479,21.621)
C2': (35.716,164.959,21.410)
O2': (35.880,163.610,21.021)
N1: (31.666,166.579,24.835)
N2: (31.070,164.430,24.272)
N3: (33.213,165.104,23.805)
N7: (34.935,168.193,24.389)
N9: (35.352,166.177,23.521)
O5': (38.624,167.773,21.971)
O3': (36.963,165.677,19.409)
Image (generated by PyMOL):