Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YKG:C8:D2
Extra
PDB:
ATOM 1 O3' C A 7 18.170 -8.256 -20.330 1.00113.84 O
ATOM 2 P G A 8 19.521 -7.660 -19.692 1.00120.93 P
ATOM 3 OP1 G A 8 20.153 -8.704 -18.847 1.00129.63 O
ATOM 4 OP2 G A 8 19.192 -6.339 -19.105 1.00118.75 O
ATOM 5 O5' G A 8 20.436 -7.385 -20.981 1.00117.56 O
ATOM 6 C5' G A 8 20.865 -8.454 -21.823 1.00120.38 C
ATOM 7 C4' G A 8 21.647 -7.957 -23.031 1.00118.10 C
ATOM 8 O4' G A 8 20.758 -7.325 -24.001 1.00110.78 O
ATOM 9 C3' G A 8 22.721 -6.909 -22.751 1.00121.67 C
ATOM 10 O3' G A 8 23.915 -7.486 -22.183 1.00132.40 O
ATOM 11 C2' G A 8 22.903 -6.339 -24.157 1.00114.77 C
ATOM 12 O2' G A 8 23.730 -7.136 -24.990 1.00114.45 O
ATOM 13 C1' G A 8 21.453 -6.271 -24.653 1.00108.10 C
ATOM 14 N9 G A 8 20.900 -4.954 -24.314 1.00104.76 N
ATOM 15 C8 G A 8 20.125 -4.620 -23.228 1.00105.61 C
ATOM 16 N7 G A 8 19.817 -3.355 -23.180 1.00102.75 N
ATOM 17 C5 G A 8 20.432 -2.809 -24.299 1.00100.06 C
ATOM 18 C6 G A 8 20.448 -1.473 -24.776 1.00 97.67 C
ATOM 19 O6 G A 8 19.900 -0.480 -24.274 1.00 96.86 O
ATOM 20 N1 G A 8 21.203 -1.341 -25.951 1.00 96.65 N
ATOM 21 C2 G A 8 21.848 -2.375 -26.588 1.00 97.24 C
ATOM 22 N2 G A 8 22.517 -2.066 -27.709 1.00 96.16 N
ATOM 23 N3 G A 8 21.830 -3.631 -26.150 1.00 99.28 N
ATOM 24 C4 G A 8 21.108 -3.776 -25.005 1.00101.00 C
ATOM 25 P C A 9 25.276 -6.636 -21.976 1.00139.71 P
ATOM 26 OP1 C A 9 26.277 -7.506 -21.312 1.00148.38 O
ATOM 27 OP2 C A 9 24.959 -5.331 -21.342 1.00139.16 O
ATOM 28 O5' C A 9 25.685 -6.405 -23.518 1.00134.79 O
TER
ATOM 1 O3' C B 1 21.981 2.758 -33.546 1.00 90.66 O
ATOM 2 P G B 2 20.527 2.372 -34.070 1.00 84.78 P
ATOM 3 OP1 G B 2 20.483 2.581 -35.536 1.00 86.44 O
ATOM 4 OP2 G B 2 19.547 3.031 -33.189 1.00 82.00 O
ATOM 5 O5' G B 2 20.444 0.808 -33.778 1.00 82.25 O
ATOM 6 C5' G B 2 21.273 -0.103 -34.491 1.00 83.58 C
ATOM 7 C4' G B 2 21.339 -1.407 -33.732 1.00 82.19 C
ATOM 8 O4' G B 2 21.684 -1.167 -32.338 1.00 84.58 O
ATOM 9 C3' G B 2 20.007 -2.107 -33.583 1.00 78.36 C
ATOM 10 O3' G B 2 19.567 -2.682 -34.804 1.00 77.53 O
ATOM 11 C2' G B 2 20.421 -3.102 -32.503 1.00 79.57 C
ATOM 12 O2' G B 2 21.483 -3.939 -32.891 1.00 80.74 O
ATOM 13 C1' G B 2 21.028 -2.129 -31.515 1.00 82.40 C
ATOM 14 N9 G B 2 20.143 -1.471 -30.528 1.00 82.14 N
ATOM 15 C8 G B 2 19.813 -0.134 -30.493 1.00 81.80 C
ATOM 16 N7 G B 2 19.050 0.204 -29.492 1.00 80.73 N
ATOM 17 C5 G B 2 18.855 -0.982 -28.801 1.00 81.24 C
ATOM 18 C6 G B 2 18.104 -1.233 -27.621 1.00 81.97 C
ATOM 19 O6 G B 2 17.438 -0.433 -26.939 1.00 81.14 O
ATOM 20 N1 G B 2 18.155 -2.574 -27.244 1.00 83.53 N
ATOM 21 C2 G B 2 18.849 -3.545 -27.920 1.00 84.39 C
ATOM 22 N2 G B 2 18.782 -4.779 -27.401 1.00 87.73 N
ATOM 23 N3 G B 2 19.557 -3.321 -29.024 1.00 83.34 N
ATOM 24 C4 G B 2 19.522 -2.022 -29.417 1.00 81.80 C
ATOM 25 P C B 3 18.054 -2.517 -35.315 1.00 76.15 P
ATOM 26 OP1 C B 3 18.047 -2.587 -36.790 1.00 78.83 O
ATOM 27 OP2 C B 3 17.456 -1.347 -34.654 1.00 75.97 O
ATOM 28 O5' C B 3 17.293 -3.839 -34.818 1.00 74.19 O
TER
ATOM 2 P G A 8 19.521 -7.660 -19.692 1.00120.93 P
ATOM 3 OP1 G A 8 20.153 -8.704 -18.847 1.00129.63 O
ATOM 4 OP2 G A 8 19.192 -6.339 -19.105 1.00118.75 O
ATOM 5 O5' G A 8 20.436 -7.385 -20.981 1.00117.56 O
ATOM 6 C5' G A 8 20.865 -8.454 -21.823 1.00120.38 C
ATOM 7 C4' G A 8 21.647 -7.957 -23.031 1.00118.10 C
ATOM 8 O4' G A 8 20.758 -7.325 -24.001 1.00110.78 O
ATOM 9 C3' G A 8 22.721 -6.909 -22.751 1.00121.67 C
ATOM 10 O3' G A 8 23.915 -7.486 -22.183 1.00132.40 O
ATOM 11 C2' G A 8 22.903 -6.339 -24.157 1.00114.77 C
ATOM 12 O2' G A 8 23.730 -7.136 -24.990 1.00114.45 O
ATOM 13 C1' G A 8 21.453 -6.271 -24.653 1.00108.10 C
ATOM 14 N9 G A 8 20.900 -4.954 -24.314 1.00104.76 N
ATOM 15 C8 G A 8 20.125 -4.620 -23.228 1.00105.61 C
ATOM 16 N7 G A 8 19.817 -3.355 -23.180 1.00102.75 N
ATOM 17 C5 G A 8 20.432 -2.809 -24.299 1.00100.06 C
ATOM 18 C6 G A 8 20.448 -1.473 -24.776 1.00 97.67 C
ATOM 19 O6 G A 8 19.900 -0.480 -24.274 1.00 96.86 O
ATOM 20 N1 G A 8 21.203 -1.341 -25.951 1.00 96.65 N
ATOM 21 C2 G A 8 21.848 -2.375 -26.588 1.00 97.24 C
ATOM 22 N2 G A 8 22.517 -2.066 -27.709 1.00 96.16 N
ATOM 23 N3 G A 8 21.830 -3.631 -26.150 1.00 99.28 N
ATOM 24 C4 G A 8 21.108 -3.776 -25.005 1.00101.00 C
ATOM 25 P C A 9 25.276 -6.636 -21.976 1.00139.71 P
ATOM 26 OP1 C A 9 26.277 -7.506 -21.312 1.00148.38 O
ATOM 27 OP2 C A 9 24.959 -5.331 -21.342 1.00139.16 O
ATOM 28 O5' C A 9 25.685 -6.405 -23.518 1.00134.79 O
TER
ATOM 1 O3' C B 1 21.981 2.758 -33.546 1.00 90.66 O
ATOM 2 P G B 2 20.527 2.372 -34.070 1.00 84.78 P
ATOM 3 OP1 G B 2 20.483 2.581 -35.536 1.00 86.44 O
ATOM 4 OP2 G B 2 19.547 3.031 -33.189 1.00 82.00 O
ATOM 5 O5' G B 2 20.444 0.808 -33.778 1.00 82.25 O
ATOM 6 C5' G B 2 21.273 -0.103 -34.491 1.00 83.58 C
ATOM 7 C4' G B 2 21.339 -1.407 -33.732 1.00 82.19 C
ATOM 8 O4' G B 2 21.684 -1.167 -32.338 1.00 84.58 O
ATOM 9 C3' G B 2 20.007 -2.107 -33.583 1.00 78.36 C
ATOM 10 O3' G B 2 19.567 -2.682 -34.804 1.00 77.53 O
ATOM 11 C2' G B 2 20.421 -3.102 -32.503 1.00 79.57 C
ATOM 12 O2' G B 2 21.483 -3.939 -32.891 1.00 80.74 O
ATOM 13 C1' G B 2 21.028 -2.129 -31.515 1.00 82.40 C
ATOM 14 N9 G B 2 20.143 -1.471 -30.528 1.00 82.14 N
ATOM 15 C8 G B 2 19.813 -0.134 -30.493 1.00 81.80 C
ATOM 16 N7 G B 2 19.050 0.204 -29.492 1.00 80.73 N
ATOM 17 C5 G B 2 18.855 -0.982 -28.801 1.00 81.24 C
ATOM 18 C6 G B 2 18.104 -1.233 -27.621 1.00 81.97 C
ATOM 19 O6 G B 2 17.438 -0.433 -26.939 1.00 81.14 O
ATOM 20 N1 G B 2 18.155 -2.574 -27.244 1.00 83.53 N
ATOM 21 C2 G B 2 18.849 -3.545 -27.920 1.00 84.39 C
ATOM 22 N2 G B 2 18.782 -4.779 -27.401 1.00 87.73 N
ATOM 23 N3 G B 2 19.557 -3.321 -29.024 1.00 83.34 N
ATOM 24 C4 G B 2 19.522 -2.022 -29.417 1.00 81.80 C
ATOM 25 P C B 3 18.054 -2.517 -35.315 1.00 76.15 P
ATOM 26 OP1 C B 3 18.047 -2.587 -36.790 1.00 78.83 O
ATOM 27 OP2 C B 3 17.456 -1.347 -34.654 1.00 75.97 O
ATOM 28 O5' C B 3 17.293 -3.839 -34.818 1.00 74.19 O
TER
Atoms:
OP1: (20.153,-8.704,-18.847)
OP2: (19.192,-6.339,-19.105)
C3': (22.721,-6.909,-22.751)
C1': (21.453,-6.271,-24.653)
C5': (20.865,-8.454,-21.823)
O6: (19.900,-0.480,-24.274)
O4': (20.758,-7.325,-24.001)
C8: (20.125,-4.620,-23.228)
C2: (21.848,-2.375,-26.588)
C6: (20.448,-1.473,-24.776)
C5: (20.432,-2.809,-24.299)
C4: (21.108,-3.776,-25.005)
P: (19.521,-7.660,-19.692)
C4': (21.647,-7.957,-23.031)
C2': (22.903,-6.339,-24.157)
O2': (23.730,-7.136,-24.990)
N1: (21.203,-1.341,-25.951)
N2: (22.517,-2.066,-27.709)
N3: (21.830,-3.631,-26.150)
N7: (19.817,-3.355,-23.180)
N9: (20.900,-4.954,-24.314)
O5': (20.436,-7.385,-20.981)
O3': (23.915,-7.486,-22.183)
OP2: (19.192,-6.339,-19.105)
C3': (22.721,-6.909,-22.751)
C1': (21.453,-6.271,-24.653)
C5': (20.865,-8.454,-21.823)
O6: (19.900,-0.480,-24.274)
O4': (20.758,-7.325,-24.001)
C8: (20.125,-4.620,-23.228)
C2: (21.848,-2.375,-26.588)
C6: (20.448,-1.473,-24.776)
C5: (20.432,-2.809,-24.299)
C4: (21.108,-3.776,-25.005)
P: (19.521,-7.660,-19.692)
C4': (21.647,-7.957,-23.031)
C2': (22.903,-6.339,-24.157)
O2': (23.730,-7.136,-24.990)
N1: (21.203,-1.341,-25.951)
N2: (22.517,-2.066,-27.709)
N3: (21.830,-3.631,-26.150)
N7: (19.817,-3.355,-23.180)
N9: (20.900,-4.954,-24.314)
O5': (20.436,-7.385,-20.981)
O3': (23.915,-7.486,-22.183)
OP1: (20.483,2.581,-35.536)
OP2: (19.547,3.031,-33.189)
C3': (20.007,-2.107,-33.583)
C1': (21.028,-2.129,-31.515)
C5': (21.273,-0.103,-34.491)
O6: (17.438,-0.433,-26.939)
O4': (21.684,-1.167,-32.338)
C8: (19.813,-0.134,-30.493)
C2: (18.849,-3.545,-27.920)
C6: (18.104,-1.233,-27.621)
C5: (18.855,-0.982,-28.801)
C4: (19.522,-2.022,-29.417)
P: (20.527,2.372,-34.070)
C4': (21.339,-1.407,-33.732)
C2': (20.421,-3.102,-32.503)
O2': (21.483,-3.939,-32.891)
N1: (18.155,-2.574,-27.244)
N2: (18.782,-4.779,-27.401)
N3: (19.557,-3.321,-29.024)
N7: (19.050,0.204,-29.492)
N9: (20.143,-1.471,-30.528)
O5': (20.444,0.808,-33.778)
O3': (19.567,-2.682,-34.804)
OP2: (19.547,3.031,-33.189)
C3': (20.007,-2.107,-33.583)
C1': (21.028,-2.129,-31.515)
C5': (21.273,-0.103,-34.491)
O6: (17.438,-0.433,-26.939)
O4': (21.684,-1.167,-32.338)
C8: (19.813,-0.134,-30.493)
C2: (18.849,-3.545,-27.920)
C6: (18.104,-1.233,-27.621)
C5: (18.855,-0.982,-28.801)
C4: (19.522,-2.022,-29.417)
P: (20.527,2.372,-34.070)
C4': (21.339,-1.407,-33.732)
C2': (20.421,-3.102,-32.503)
O2': (21.483,-3.939,-32.891)
N1: (18.155,-2.574,-27.244)
N2: (18.782,-4.779,-27.401)
N3: (19.557,-3.321,-29.024)
N7: (19.050,0.204,-29.492)
N9: (20.143,-1.471,-30.528)
O5': (20.444,0.808,-33.778)
O3': (19.567,-2.682,-34.804)
Image (generated by PyMOL):