Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1215:A1273
Extra
PDB:
ATOM 1 O3' A A1214 249.334 126.771 -16.603 1.00 46.11 O
ATOM 2 P A A1215 250.097 127.295 -17.913 1.00 47.57 P
ATOM 3 OP1 A A1215 249.119 128.025 -18.773 1.00 46.32 O
ATOM 4 OP2 A A1215 250.853 126.141 -18.473 1.00 47.58 O
ATOM 5 O5' A A1215 251.133 128.375 -17.342 1.00 47.59 O
ATOM 6 C5' A A1215 250.671 129.586 -16.705 1.00 46.74 C
ATOM 7 C4' A A1215 251.674 130.706 -16.902 1.00 46.11 C
ATOM 8 O4' A A1215 252.888 130.394 -16.171 1.00 45.81 O
ATOM 9 C3' A A1215 252.094 130.978 -18.343 1.00 45.96 C
ATOM 10 O3' A A1215 252.304 132.375 -18.518 1.00 46.79 O
ATOM 11 C2' A A1215 253.428 130.245 -18.447 1.00 45.56 C
ATOM 12 O2' A A1215 254.291 130.750 -19.447 1.00 45.01 O
ATOM 13 C1' A A1215 253.990 130.460 -17.043 1.00 45.10 C
ATOM 14 N9 A A1215 254.972 129.475 -16.610 1.00 44.01 N
ATOM 15 C8 A A1215 254.779 128.156 -16.295 1.00 43.78 C
ATOM 16 N7 A A1215 255.874 127.532 -15.943 1.00 44.44 N
ATOM 17 C5 A A1215 256.856 128.510 -16.029 1.00 44.56 C
ATOM 18 C6 A A1215 258.241 128.483 -15.795 1.00 44.24 C
ATOM 19 N6 A A1215 258.903 127.388 -15.414 1.00 44.05 N
ATOM 20 N1 A A1215 258.932 129.630 -15.972 1.00 43.96 N
ATOM 21 C2 A A1215 258.265 130.723 -16.365 1.00 45.21 C
ATOM 22 N3 A A1215 256.968 130.872 -16.623 1.00 45.69 N
ATOM 23 C4 A A1215 256.312 129.712 -16.434 1.00 44.88 C
ATOM 24 P U A1216 251.250 133.244 -19.364 1.00 48.61 P
ATOM 25 OP1 U A1216 250.548 132.291 -20.280 1.00 50.37 O
ATOM 26 OP2 U A1216 251.905 134.444 -19.946 1.00 47.39 O
ATOM 27 O5' U A1216 250.218 133.718 -18.258 1.00 49.41 O
TER
ATOM 1 O3' C B1272 264.601 126.881 -13.518 1.00 59.08 O
ATOM 2 P C B1273 265.481 126.773 -14.854 1.00 58.61 P
ATOM 3 OP1 C B1273 266.201 125.464 -14.731 1.00 58.29 O
ATOM 4 OP2 C B1273 266.243 128.035 -15.043 1.00 59.27 O
ATOM 5 O5' C B1273 264.407 126.666 -15.998 1.00 56.63 O
ATOM 6 C5' C B1273 263.486 125.575 -16.023 1.00 54.68 C
ATOM 7 C4' C B1273 262.489 125.786 -17.113 1.00 53.01 C
ATOM 8 O4' C B1273 261.841 127.062 -16.880 1.00 53.43 O
ATOM 9 C3' C B1273 263.050 125.834 -18.530 1.00 52.09 C
ATOM 10 O3' C B1273 262.116 125.230 -19.383 1.00 51.48 O
ATOM 11 C2' C B1273 263.110 127.328 -18.836 1.00 53.05 C
ATOM 12 O2' C B1273 262.919 127.634 -20.201 1.00 53.85 O
ATOM 13 C1' C B1273 261.921 127.854 -18.043 1.00 53.55 C
ATOM 14 N1 C B1273 262.044 129.266 -17.655 1.00 54.41 N
ATOM 15 C2 C B1273 261.345 130.238 -18.400 1.00 55.71 C
ATOM 16 O2 C B1273 260.639 129.883 -19.365 1.00 55.60 O
ATOM 17 N3 C B1273 261.453 131.536 -18.050 1.00 56.86 N
ATOM 18 C4 C B1273 262.210 131.885 -17.007 1.00 57.18 C
ATOM 19 N4 C B1273 262.277 133.183 -16.695 1.00 58.54 N
ATOM 20 C5 C B1273 262.928 130.921 -16.236 1.00 56.21 C
ATOM 21 C6 C B1273 262.819 129.638 -16.592 1.00 54.76 C
ATOM 22 P C B1274 262.580 124.079 -20.394 1.00 51.70 P
ATOM 23 OP1 C B1274 263.647 123.274 -19.714 1.00 51.23 O
ATOM 24 OP2 C B1274 262.827 124.725 -21.709 1.00 51.42 O
ATOM 25 O5' C B1274 261.289 123.155 -20.523 1.00 52.96 O
TER
ATOM 2 P A A1215 250.097 127.295 -17.913 1.00 47.57 P
ATOM 3 OP1 A A1215 249.119 128.025 -18.773 1.00 46.32 O
ATOM 4 OP2 A A1215 250.853 126.141 -18.473 1.00 47.58 O
ATOM 5 O5' A A1215 251.133 128.375 -17.342 1.00 47.59 O
ATOM 6 C5' A A1215 250.671 129.586 -16.705 1.00 46.74 C
ATOM 7 C4' A A1215 251.674 130.706 -16.902 1.00 46.11 C
ATOM 8 O4' A A1215 252.888 130.394 -16.171 1.00 45.81 O
ATOM 9 C3' A A1215 252.094 130.978 -18.343 1.00 45.96 C
ATOM 10 O3' A A1215 252.304 132.375 -18.518 1.00 46.79 O
ATOM 11 C2' A A1215 253.428 130.245 -18.447 1.00 45.56 C
ATOM 12 O2' A A1215 254.291 130.750 -19.447 1.00 45.01 O
ATOM 13 C1' A A1215 253.990 130.460 -17.043 1.00 45.10 C
ATOM 14 N9 A A1215 254.972 129.475 -16.610 1.00 44.01 N
ATOM 15 C8 A A1215 254.779 128.156 -16.295 1.00 43.78 C
ATOM 16 N7 A A1215 255.874 127.532 -15.943 1.00 44.44 N
ATOM 17 C5 A A1215 256.856 128.510 -16.029 1.00 44.56 C
ATOM 18 C6 A A1215 258.241 128.483 -15.795 1.00 44.24 C
ATOM 19 N6 A A1215 258.903 127.388 -15.414 1.00 44.05 N
ATOM 20 N1 A A1215 258.932 129.630 -15.972 1.00 43.96 N
ATOM 21 C2 A A1215 258.265 130.723 -16.365 1.00 45.21 C
ATOM 22 N3 A A1215 256.968 130.872 -16.623 1.00 45.69 N
ATOM 23 C4 A A1215 256.312 129.712 -16.434 1.00 44.88 C
ATOM 24 P U A1216 251.250 133.244 -19.364 1.00 48.61 P
ATOM 25 OP1 U A1216 250.548 132.291 -20.280 1.00 50.37 O
ATOM 26 OP2 U A1216 251.905 134.444 -19.946 1.00 47.39 O
ATOM 27 O5' U A1216 250.218 133.718 -18.258 1.00 49.41 O
TER
ATOM 1 O3' C B1272 264.601 126.881 -13.518 1.00 59.08 O
ATOM 2 P C B1273 265.481 126.773 -14.854 1.00 58.61 P
ATOM 3 OP1 C B1273 266.201 125.464 -14.731 1.00 58.29 O
ATOM 4 OP2 C B1273 266.243 128.035 -15.043 1.00 59.27 O
ATOM 5 O5' C B1273 264.407 126.666 -15.998 1.00 56.63 O
ATOM 6 C5' C B1273 263.486 125.575 -16.023 1.00 54.68 C
ATOM 7 C4' C B1273 262.489 125.786 -17.113 1.00 53.01 C
ATOM 8 O4' C B1273 261.841 127.062 -16.880 1.00 53.43 O
ATOM 9 C3' C B1273 263.050 125.834 -18.530 1.00 52.09 C
ATOM 10 O3' C B1273 262.116 125.230 -19.383 1.00 51.48 O
ATOM 11 C2' C B1273 263.110 127.328 -18.836 1.00 53.05 C
ATOM 12 O2' C B1273 262.919 127.634 -20.201 1.00 53.85 O
ATOM 13 C1' C B1273 261.921 127.854 -18.043 1.00 53.55 C
ATOM 14 N1 C B1273 262.044 129.266 -17.655 1.00 54.41 N
ATOM 15 C2 C B1273 261.345 130.238 -18.400 1.00 55.71 C
ATOM 16 O2 C B1273 260.639 129.883 -19.365 1.00 55.60 O
ATOM 17 N3 C B1273 261.453 131.536 -18.050 1.00 56.86 N
ATOM 18 C4 C B1273 262.210 131.885 -17.007 1.00 57.18 C
ATOM 19 N4 C B1273 262.277 133.183 -16.695 1.00 58.54 N
ATOM 20 C5 C B1273 262.928 130.921 -16.236 1.00 56.21 C
ATOM 21 C6 C B1273 262.819 129.638 -16.592 1.00 54.76 C
ATOM 22 P C B1274 262.580 124.079 -20.394 1.00 51.70 P
ATOM 23 OP1 C B1274 263.647 123.274 -19.714 1.00 51.23 O
ATOM 24 OP2 C B1274 262.827 124.725 -21.709 1.00 51.42 O
ATOM 25 O5' C B1274 261.289 123.155 -20.523 1.00 52.96 O
TER
Atoms:
OP1: (249.119,128.025,-18.773)
OP2: (250.853,126.141,-18.473)
C3': (252.094,130.978,-18.343)
C1': (253.990,130.460,-17.043)
C5': (250.671,129.586,-16.705)
O4': (252.888,130.394,-16.171)
C8: (254.779,128.156,-16.295)
O2': (254.291,130.750,-19.447)
C6: (258.241,128.483,-15.795)
C5: (256.856,128.510,-16.029)
C4: (256.312,129.712,-16.434)
P: (250.097,127.295,-17.913)
C4': (251.674,130.706,-16.902)
C2': (253.428,130.245,-18.447)
C2: (258.265,130.723,-16.365)
N1: (258.932,129.630,-15.972)
N3: (256.968,130.872,-16.623)
N6: (258.903,127.388,-15.414)
N7: (255.874,127.532,-15.943)
N9: (254.972,129.475,-16.610)
O5': (251.133,128.375,-17.342)
O3': (252.304,132.375,-18.518)
OP2: (250.853,126.141,-18.473)
C3': (252.094,130.978,-18.343)
C1': (253.990,130.460,-17.043)
C5': (250.671,129.586,-16.705)
O4': (252.888,130.394,-16.171)
C8: (254.779,128.156,-16.295)
O2': (254.291,130.750,-19.447)
C6: (258.241,128.483,-15.795)
C5: (256.856,128.510,-16.029)
C4: (256.312,129.712,-16.434)
P: (250.097,127.295,-17.913)
C4': (251.674,130.706,-16.902)
C2': (253.428,130.245,-18.447)
C2: (258.265,130.723,-16.365)
N1: (258.932,129.630,-15.972)
N3: (256.968,130.872,-16.623)
N6: (258.903,127.388,-15.414)
N7: (255.874,127.532,-15.943)
N9: (254.972,129.475,-16.610)
O5': (251.133,128.375,-17.342)
O3': (252.304,132.375,-18.518)
C2: (261.345,130.238,-18.400)
OP1: (266.201,125.464,-14.731)
OP2: (266.243,128.035,-15.043)
C4: (262.210,131.885,-17.007)
O5': (264.407,126.666,-15.998)
C3': (263.050,125.834,-18.530)
C1': (261.921,127.854,-18.043)
O4': (261.841,127.062,-16.880)
C5': (263.486,125.575,-16.023)
P: (265.481,126.773,-14.854)
O2: (260.639,129.883,-19.365)
C4': (262.489,125.786,-17.113)
C2': (263.110,127.328,-18.836)
O2': (262.919,127.634,-20.201)
N1: (262.044,129.266,-17.655)
N3: (261.453,131.536,-18.050)
N4: (262.277,133.183,-16.695)
C6: (262.819,129.638,-16.592)
C5: (262.928,130.921,-16.236)
O3': (262.116,125.230,-19.383)
OP1: (266.201,125.464,-14.731)
OP2: (266.243,128.035,-15.043)
C4: (262.210,131.885,-17.007)
O5': (264.407,126.666,-15.998)
C3': (263.050,125.834,-18.530)
C1': (261.921,127.854,-18.043)
O4': (261.841,127.062,-16.880)
C5': (263.486,125.575,-16.023)
P: (265.481,126.773,-14.854)
O2: (260.639,129.883,-19.365)
C4': (262.489,125.786,-17.113)
C2': (263.110,127.328,-18.836)
O2': (262.919,127.634,-20.201)
N1: (262.044,129.266,-17.655)
N3: (261.453,131.536,-18.050)
N4: (262.277,133.183,-16.695)
C6: (262.819,129.638,-16.592)
C5: (262.928,130.921,-16.236)
O3': (262.116,125.230,-19.383)
Image (generated by PyMOL):