ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A341:A328

Extra

PDB:
ATOM 1 O3' G A 340 136.652 46.320 2.906 1.00 72.03 O
ATOM 2 P G A 341 135.401 47.162 2.354 1.00 61.42 P
ATOM 3 OP1 G A 341 134.358 47.069 3.410 1.00 58.50 O
ATOM 4 OP2 G A 341 135.055 46.803 0.945 1.00 58.50 O
ATOM 5 O5' G A 341 135.983 48.639 2.352 1.00 61.42 O
ATOM 6 C5' G A 341 136.898 49.048 3.381 1.00 61.42 C
ATOM 7 C4' G A 341 137.995 49.876 2.789 1.00 61.42 C
ATOM 8 O4' G A 341 138.838 49.039 1.954 1.00 61.42 O
ATOM 9 C3' G A 341 137.495 51.020 1.922 1.00 61.42 C
ATOM 10 O3' G A 341 138.279 52.180 2.159 1.00 61.42 O
ATOM 11 C2' G A 341 137.691 50.484 0.509 1.00 61.42 C
ATOM 12 O2' G A 341 137.914 51.497 -0.440 1.00 61.42 O
ATOM 13 C1' G A 341 138.932 49.607 0.671 1.00 61.42 C
ATOM 14 N9 G A 341 139.028 48.539 -0.320 1.00 58.50 N
ATOM 15 C8 G A 341 138.050 47.643 -0.671 1.00 58.50 C
ATOM 16 N7 G A 341 138.401 46.859 -1.653 1.00 58.50 N
ATOM 17 C5 G A 341 139.694 47.249 -1.959 1.00 58.50 C
ATOM 18 C6 G A 341 140.574 46.775 -2.955 1.00 58.50 C
ATOM 19 O6 G A 341 140.366 45.908 -3.817 1.00 58.50 O
ATOM 20 N1 G A 341 141.800 47.428 -2.903 1.00 58.50 N
ATOM 21 C2 G A 341 142.127 48.423 -2.015 1.00 58.50 C
ATOM 22 N2 G A 341 143.372 48.924 -2.113 1.00 58.50 N
ATOM 23 N3 G A 341 141.300 48.892 -1.095 1.00 58.50 N
ATOM 24 C4 G A 341 140.109 48.264 -1.125 1.00 58.50 C
ATOM 25 P C A 342 138.023 53.053 3.488 1.00 47.46 P
ATOM 26 OP1 C A 342 138.932 52.522 4.556 1.00 48.07 O
ATOM 27 OP2 C A 342 136.557 53.166 3.747 1.00 48.07 O
ATOM 28 O5' C A 342 138.534 54.501 3.096 1.00 47.46 O
TER

ATOM 1 O3' C B 327 147.119 44.249 -12.631 1.00 67.04 O
ATOM 2 P A B 328 147.759 43.351 -11.458 1.00 65.29 P
ATOM 3 OP1 A B 328 148.977 42.718 -12.015 1.00 63.22 O
ATOM 4 OP2 A B 328 146.711 42.501 -10.835 1.00 63.22 O
ATOM 5 O5' A B 328 148.218 44.414 -10.372 1.00 65.29 O
ATOM 6 C5' A B 328 149.126 45.459 -10.718 1.00 65.29 C
ATOM 7 C4' A B 328 149.150 46.498 -9.635 1.00 65.29 C
ATOM 8 O4' A B 328 147.873 47.186 -9.587 1.00 65.29 O
ATOM 9 C3' A B 328 149.340 45.948 -8.237 1.00 65.29 C
ATOM 10 O3' A B 328 150.705 45.736 -7.941 1.00 65.29 O
ATOM 11 C2' A B 328 148.718 47.032 -7.371 1.00 65.29 C
ATOM 12 O2' A B 328 149.606 48.114 -7.168 1.00 65.29 O
ATOM 13 C1' A B 328 147.548 47.489 -8.243 1.00 65.29 C
ATOM 14 N9 A B 328 146.293 46.810 -7.912 1.00 63.22 N
ATOM 15 C8 A B 328 145.660 45.819 -8.617 1.00 63.22 C
ATOM 16 N7 A B 328 144.534 45.422 -8.078 1.00 63.22 N
ATOM 17 C5 A B 328 144.419 46.201 -6.940 1.00 63.22 C
ATOM 18 C6 A B 328 143.435 46.272 -5.946 1.00 63.22 C
ATOM 19 N6 A B 328 142.333 45.519 -5.945 1.00 63.22 N
ATOM 20 N1 A B 328 143.619 47.158 -4.943 1.00 63.22 N
ATOM 21 C2 A B 328 144.722 47.916 -4.953 1.00 63.22 C
ATOM 22 N3 A B 328 145.717 47.943 -5.835 1.00 63.22 N
ATOM 23 C4 A B 328 145.501 47.053 -6.818 1.00 63.22 C
ATOM 24 P C B 329 151.127 44.522 -6.978 1.00 79.14 P
ATOM 25 OP1 C B 329 152.609 44.580 -6.921 1.00 56.29 O
ATOM 26 OP2 C B 329 150.453 43.270 -7.416 1.00 56.29 O
ATOM 27 O5' C B 329 150.562 44.927 -5.543 1.00 79.14 O
TER

Atoms:
OP1: (134.358,47.069,3.410)
OP2: (135.055,46.803,0.945)
C3': (137.495,51.020,1.922)
C1': (138.932,49.607,0.671)
C5': (136.898,49.048,3.381)
O6: (140.366,45.908,-3.817)
O4': (138.838,49.039,1.954)
C8: (138.050,47.643,-0.671)
C2: (142.127,48.423,-2.015)
C6: (140.574,46.775,-2.955)
C5: (139.694,47.249,-1.959)
C4: (140.109,48.264,-1.125)
P: (135.401,47.162,2.354)
C4': (137.995,49.876,2.789)
C2': (137.691,50.484,0.509)
O2': (137.914,51.497,-0.440)
N1: (141.800,47.428,-2.903)
N2: (143.372,48.924,-2.113)
N3: (141.300,48.892,-1.095)
N7: (138.401,46.859,-1.653)
N9: (139.028,48.539,-0.320)
O5': (135.983,48.639,2.352)
O3': (138.279,52.180,2.159)
OP1: (148.977,42.718,-12.015)
OP2: (146.711,42.501,-10.835)
C3': (149.340,45.948,-8.237)
C1': (147.548,47.489,-8.243)
C5': (149.126,45.459,-10.718)
O4': (147.873,47.186,-9.587)
C8: (145.660,45.819,-8.617)
O2': (149.606,48.114,-7.168)
C6: (143.435,46.272,-5.946)
C5: (144.419,46.201,-6.940)
C4: (145.501,47.053,-6.818)
P: (147.759,43.351,-11.458)
C4': (149.150,46.498,-9.635)
C2': (148.718,47.032,-7.371)
C2: (144.722,47.916,-4.953)
N1: (143.619,47.158,-4.943)
N3: (145.717,47.943,-5.835)
N6: (142.333,45.519,-5.945)
N7: (144.534,45.422,-8.078)
N9: (146.293,46.810,-7.912)
O5': (148.218,44.414,-10.372)
O3': (150.705,45.736,-7.941)
Image (generated by PyMOL):
PyMOL image
show in jmol