Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2563:A2505
Extra
PDB:
ATOM 1 O3' G A2562 79.230 -71.910 44.497 1.00 58.01 O
ATOM 2 P G A2563 80.443 -71.470 45.433 1.00 46.28 P
ATOM 3 OP1 G A2563 80.916 -72.696 46.099 1.00 59.10 O
ATOM 4 OP2 G A2563 79.987 -70.332 46.263 1.00 52.01 O
ATOM 5 O5' G A2563 81.508 -70.983 44.374 1.00 40.40 O
ATOM 6 C5' G A2563 81.771 -71.766 43.222 1.00 44.04 C
ATOM 7 C4' G A2563 82.427 -70.953 42.157 1.00 48.30 C
ATOM 8 O4' G A2563 81.502 -69.913 41.761 1.00 45.80 O
ATOM 9 C3' G A2563 83.714 -70.251 42.595 1.00 55.44 C
ATOM 10 O3' G A2563 84.713 -70.314 41.565 1.00 63.91 O
ATOM 11 C2' G A2563 83.274 -68.813 42.808 1.00 49.25 C
ATOM 12 O2' G A2563 84.278 -67.863 42.579 1.00 57.89 O
ATOM 13 C1' G A2563 82.135 -68.666 41.813 1.00 46.33 C
ATOM 14 N9 G A2563 81.148 -67.671 42.216 1.00 50.20 N
ATOM 15 C8 G A2563 80.607 -67.523 43.473 1.00 55.70 C
ATOM 16 N7 G A2563 79.768 -66.517 43.562 1.00 52.85 N
ATOM 17 C5 G A2563 79.794 -65.972 42.286 1.00 46.71 C
ATOM 18 C6 G A2563 79.104 -64.869 41.773 1.00 42.61 C
ATOM 19 O6 G A2563 78.328 -64.141 42.379 1.00 50.30 O
ATOM 20 N1 G A2563 79.397 -64.651 40.440 1.00 37.48 N
ATOM 21 C2 G A2563 80.248 -65.420 39.711 1.00 42.47 C
ATOM 22 N2 G A2563 80.404 -65.079 38.437 1.00 54.86 N
ATOM 23 N3 G A2563 80.906 -66.454 40.165 1.00 42.48 N
ATOM 24 C4 G A2563 80.636 -66.663 41.452 1.00 44.56 C
ATOM 25 P A A2564 86.122 -71.067 41.852 1.00 75.88 P
ATOM 26 OP1 A A2564 87.217 -70.109 41.536 1.00 61.09 O
ATOM 27 OP2 A A2564 86.081 -72.371 41.137 1.00 71.67 O
ATOM 28 O5' A A2564 86.067 -71.310 43.418 1.00 64.65 O
TER
ATOM 1 O3' G B2504 75.703 -53.705 40.236 1.00 51.99 O
ATOM 2 P A B2505 74.685 -54.507 39.288 1.00 38.96 P
ATOM 3 OP1 A B2505 73.461 -53.675 39.144 1.00 46.51 O
ATOM 4 OP2 A B2505 74.546 -55.868 39.836 1.00 45.40 O
ATOM 5 O5' A B2505 75.486 -54.534 37.920 1.00 41.92 O
ATOM 6 C5' A B2505 75.313 -55.586 37.005 1.00 50.41 C
ATOM 7 C4' A B2505 76.626 -56.075 36.459 1.00 40.36 C
ATOM 8 O4' A B2505 77.626 -56.134 37.517 1.00 47.59 O
ATOM 9 C3' A B2505 76.592 -57.480 35.915 1.00 36.03 C
ATOM 10 O3' A B2505 76.061 -57.534 34.622 1.00 40.21 O
ATOM 11 C2' A B2505 78.041 -57.907 36.019 1.00 38.01 C
ATOM 12 O2' A B2505 78.811 -57.267 35.026 1.00 45.53 O
ATOM 13 C1' A B2505 78.409 -57.301 37.369 1.00 41.75 C
ATOM 14 N9 A B2505 78.080 -58.217 38.477 1.00 36.47 N
ATOM 15 C8 A B2505 77.137 -58.021 39.434 1.00 33.98 C
ATOM 16 N7 A B2505 77.032 -59.005 40.273 1.00 33.00 N
ATOM 17 C5 A B2505 77.975 -59.910 39.837 1.00 29.08 C
ATOM 18 C6 A B2505 78.345 -61.160 40.320 1.00 35.01 C
ATOM 19 N6 A B2505 77.787 -61.711 41.403 1.00 32.98 N
ATOM 20 N1 A B2505 79.312 -61.824 39.654 1.00 39.99 N
ATOM 21 C2 A B2505 79.865 -61.262 38.580 1.00 38.55 C
ATOM 22 N3 A B2505 79.587 -60.087 38.036 1.00 39.45 N
ATOM 23 C4 A B2505 78.624 -59.451 38.727 1.00 34.47 C
ATOM 24 P C B2506 74.596 -58.149 34.375 1.00 58.17 P
ATOM 25 OP1 C B2506 74.067 -57.502 33.147 1.00 55.19 O
ATOM 26 OP2 C B2506 73.818 -58.031 35.637 1.00 42.75 O
ATOM 27 O5' C B2506 74.931 -59.669 34.090 1.00 49.08 O
TER
ATOM 2 P G A2563 80.443 -71.470 45.433 1.00 46.28 P
ATOM 3 OP1 G A2563 80.916 -72.696 46.099 1.00 59.10 O
ATOM 4 OP2 G A2563 79.987 -70.332 46.263 1.00 52.01 O
ATOM 5 O5' G A2563 81.508 -70.983 44.374 1.00 40.40 O
ATOM 6 C5' G A2563 81.771 -71.766 43.222 1.00 44.04 C
ATOM 7 C4' G A2563 82.427 -70.953 42.157 1.00 48.30 C
ATOM 8 O4' G A2563 81.502 -69.913 41.761 1.00 45.80 O
ATOM 9 C3' G A2563 83.714 -70.251 42.595 1.00 55.44 C
ATOM 10 O3' G A2563 84.713 -70.314 41.565 1.00 63.91 O
ATOM 11 C2' G A2563 83.274 -68.813 42.808 1.00 49.25 C
ATOM 12 O2' G A2563 84.278 -67.863 42.579 1.00 57.89 O
ATOM 13 C1' G A2563 82.135 -68.666 41.813 1.00 46.33 C
ATOM 14 N9 G A2563 81.148 -67.671 42.216 1.00 50.20 N
ATOM 15 C8 G A2563 80.607 -67.523 43.473 1.00 55.70 C
ATOM 16 N7 G A2563 79.768 -66.517 43.562 1.00 52.85 N
ATOM 17 C5 G A2563 79.794 -65.972 42.286 1.00 46.71 C
ATOM 18 C6 G A2563 79.104 -64.869 41.773 1.00 42.61 C
ATOM 19 O6 G A2563 78.328 -64.141 42.379 1.00 50.30 O
ATOM 20 N1 G A2563 79.397 -64.651 40.440 1.00 37.48 N
ATOM 21 C2 G A2563 80.248 -65.420 39.711 1.00 42.47 C
ATOM 22 N2 G A2563 80.404 -65.079 38.437 1.00 54.86 N
ATOM 23 N3 G A2563 80.906 -66.454 40.165 1.00 42.48 N
ATOM 24 C4 G A2563 80.636 -66.663 41.452 1.00 44.56 C
ATOM 25 P A A2564 86.122 -71.067 41.852 1.00 75.88 P
ATOM 26 OP1 A A2564 87.217 -70.109 41.536 1.00 61.09 O
ATOM 27 OP2 A A2564 86.081 -72.371 41.137 1.00 71.67 O
ATOM 28 O5' A A2564 86.067 -71.310 43.418 1.00 64.65 O
TER
ATOM 1 O3' G B2504 75.703 -53.705 40.236 1.00 51.99 O
ATOM 2 P A B2505 74.685 -54.507 39.288 1.00 38.96 P
ATOM 3 OP1 A B2505 73.461 -53.675 39.144 1.00 46.51 O
ATOM 4 OP2 A B2505 74.546 -55.868 39.836 1.00 45.40 O
ATOM 5 O5' A B2505 75.486 -54.534 37.920 1.00 41.92 O
ATOM 6 C5' A B2505 75.313 -55.586 37.005 1.00 50.41 C
ATOM 7 C4' A B2505 76.626 -56.075 36.459 1.00 40.36 C
ATOM 8 O4' A B2505 77.626 -56.134 37.517 1.00 47.59 O
ATOM 9 C3' A B2505 76.592 -57.480 35.915 1.00 36.03 C
ATOM 10 O3' A B2505 76.061 -57.534 34.622 1.00 40.21 O
ATOM 11 C2' A B2505 78.041 -57.907 36.019 1.00 38.01 C
ATOM 12 O2' A B2505 78.811 -57.267 35.026 1.00 45.53 O
ATOM 13 C1' A B2505 78.409 -57.301 37.369 1.00 41.75 C
ATOM 14 N9 A B2505 78.080 -58.217 38.477 1.00 36.47 N
ATOM 15 C8 A B2505 77.137 -58.021 39.434 1.00 33.98 C
ATOM 16 N7 A B2505 77.032 -59.005 40.273 1.00 33.00 N
ATOM 17 C5 A B2505 77.975 -59.910 39.837 1.00 29.08 C
ATOM 18 C6 A B2505 78.345 -61.160 40.320 1.00 35.01 C
ATOM 19 N6 A B2505 77.787 -61.711 41.403 1.00 32.98 N
ATOM 20 N1 A B2505 79.312 -61.824 39.654 1.00 39.99 N
ATOM 21 C2 A B2505 79.865 -61.262 38.580 1.00 38.55 C
ATOM 22 N3 A B2505 79.587 -60.087 38.036 1.00 39.45 N
ATOM 23 C4 A B2505 78.624 -59.451 38.727 1.00 34.47 C
ATOM 24 P C B2506 74.596 -58.149 34.375 1.00 58.17 P
ATOM 25 OP1 C B2506 74.067 -57.502 33.147 1.00 55.19 O
ATOM 26 OP2 C B2506 73.818 -58.031 35.637 1.00 42.75 O
ATOM 27 O5' C B2506 74.931 -59.669 34.090 1.00 49.08 O
TER
Atoms:
OP1: (80.916,-72.696,46.099)
OP2: (79.987,-70.332,46.263)
C3': (83.714,-70.251,42.595)
C1': (82.135,-68.666,41.813)
C5': (81.771,-71.766,43.222)
O6: (78.328,-64.141,42.379)
O4': (81.502,-69.913,41.761)
C8: (80.607,-67.523,43.473)
C2: (80.248,-65.420,39.711)
C6: (79.104,-64.869,41.773)
C5: (79.794,-65.972,42.286)
C4: (80.636,-66.663,41.452)
P: (80.443,-71.470,45.433)
C4': (82.427,-70.953,42.157)
C2': (83.274,-68.813,42.808)
O2': (84.278,-67.863,42.579)
N1: (79.397,-64.651,40.440)
N2: (80.404,-65.079,38.437)
N3: (80.906,-66.454,40.165)
N7: (79.768,-66.517,43.562)
N9: (81.148,-67.671,42.216)
O5': (81.508,-70.983,44.374)
O3': (84.713,-70.314,41.565)
OP2: (79.987,-70.332,46.263)
C3': (83.714,-70.251,42.595)
C1': (82.135,-68.666,41.813)
C5': (81.771,-71.766,43.222)
O6: (78.328,-64.141,42.379)
O4': (81.502,-69.913,41.761)
C8: (80.607,-67.523,43.473)
C2: (80.248,-65.420,39.711)
C6: (79.104,-64.869,41.773)
C5: (79.794,-65.972,42.286)
C4: (80.636,-66.663,41.452)
P: (80.443,-71.470,45.433)
C4': (82.427,-70.953,42.157)
C2': (83.274,-68.813,42.808)
O2': (84.278,-67.863,42.579)
N1: (79.397,-64.651,40.440)
N2: (80.404,-65.079,38.437)
N3: (80.906,-66.454,40.165)
N7: (79.768,-66.517,43.562)
N9: (81.148,-67.671,42.216)
O5': (81.508,-70.983,44.374)
O3': (84.713,-70.314,41.565)
OP1: (73.461,-53.675,39.144)
OP2: (74.546,-55.868,39.836)
C3': (76.592,-57.480,35.915)
C1': (78.409,-57.301,37.369)
C5': (75.313,-55.586,37.005)
O4': (77.626,-56.134,37.517)
C8: (77.137,-58.021,39.434)
O2': (78.811,-57.267,35.026)
C6: (78.345,-61.160,40.320)
C5: (77.975,-59.910,39.837)
C4: (78.624,-59.451,38.727)
P: (74.685,-54.507,39.288)
C4': (76.626,-56.075,36.459)
C2': (78.041,-57.907,36.019)
C2: (79.865,-61.262,38.580)
N1: (79.312,-61.824,39.654)
N3: (79.587,-60.087,38.036)
N6: (77.787,-61.711,41.403)
N7: (77.032,-59.005,40.273)
N9: (78.080,-58.217,38.477)
O5': (75.486,-54.534,37.920)
O3': (76.061,-57.534,34.622)
OP2: (74.546,-55.868,39.836)
C3': (76.592,-57.480,35.915)
C1': (78.409,-57.301,37.369)
C5': (75.313,-55.586,37.005)
O4': (77.626,-56.134,37.517)
C8: (77.137,-58.021,39.434)
O2': (78.811,-57.267,35.026)
C6: (78.345,-61.160,40.320)
C5: (77.975,-59.910,39.837)
C4: (78.624,-59.451,38.727)
P: (74.685,-54.507,39.288)
C4': (76.626,-56.075,36.459)
C2': (78.041,-57.907,36.019)
C2: (79.865,-61.262,38.580)
N1: (79.312,-61.824,39.654)
N3: (79.587,-60.087,38.036)
N6: (77.787,-61.711,41.403)
N7: (77.032,-59.005,40.273)
N9: (78.080,-58.217,38.477)
O5': (75.486,-54.534,37.920)
O3': (76.061,-57.534,34.622)
Image (generated by PyMOL):