ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0173:0140

Extra

PDB:
ATOM 1 O3' G A 172 64.834 125.490 22.700 1.00 42.23 O
ATOM 2 P G A 173 63.779 126.671 22.432 1.00 44.66 P
ATOM 3 OP1 G A 173 63.990 127.122 21.039 1.00 48.81 O
ATOM 4 OP2 G A 173 63.855 127.651 23.535 1.00 47.90 O
ATOM 5 O5' G A 173 62.333 125.995 22.516 1.00 49.10 O
ATOM 6 C5' G A 173 62.132 124.633 22.127 1.00 47.68 C
ATOM 7 C4' G A 173 61.208 123.922 23.097 1.00 47.64 C
ATOM 8 O4' G A 173 61.609 124.208 24.467 1.00 47.03 O
ATOM 9 C3' G A 173 59.711 124.227 23.030 1.00 47.92 C
ATOM 10 O3' G A 173 59.020 123.018 23.315 1.00 51.37 O
ATOM 11 C2' G A 173 59.491 125.125 24.243 1.00 47.17 C
ATOM 12 O2' G A 173 58.182 125.017 24.767 1.00 44.39 O
ATOM 13 C1' G A 173 60.461 124.498 25.233 1.00 46.41 C
ATOM 14 N9 G A 173 60.822 125.352 26.363 1.00 47.92 N
ATOM 15 C8 G A 173 61.408 126.590 26.313 1.00 47.10 C
ATOM 16 N7 G A 173 61.583 127.119 27.493 1.00 46.25 N
ATOM 17 C5 G A 173 61.093 126.171 28.377 1.00 46.34 C
ATOM 18 C6 G A 173 61.020 126.187 29.796 1.00 47.32 C
ATOM 19 O6 G A 173 61.398 127.068 30.579 1.00 47.46 O
ATOM 20 N1 G A 173 60.435 125.027 30.290 1.00 46.59 N
ATOM 21 C2 G A 173 59.980 123.987 29.527 1.00 45.68 C
ATOM 22 N2 G A 173 59.411 122.982 30.193 1.00 45.38 N
ATOM 23 N3 G A 173 60.064 123.946 28.208 1.00 47.60 N
ATOM 24 C4 G A 173 60.622 125.070 27.700 1.00 47.48 C
ATOM 25 P A A 174 58.576 122.037 22.123 1.00 50.30 P
ATOM 26 OP1 A A 174 59.641 122.051 21.081 1.00 50.07 O
ATOM 27 OP2 A A 174 57.177 122.361 21.756 1.00 52.81 O
ATOM 28 O5' A A 174 58.564 120.614 22.831 1.00 47.00 O
TER

ATOM 1 O3' A B 139 60.277 127.316 41.190 1.00 63.58 O
ATOM 2 P A B 140 61.824 126.868 41.253 1.00 64.70 P
ATOM 3 OP1 A B 140 62.164 126.850 42.693 1.00 68.26 O
ATOM 4 OP2 A B 140 62.640 127.683 40.318 1.00 65.48 O
ATOM 5 O5' A B 140 61.830 125.362 40.734 1.00 60.46 O
ATOM 6 C5' A B 140 60.996 124.386 41.363 1.00 54.42 C
ATOM 7 C4' A B 140 60.164 123.655 40.336 1.00 50.42 C
ATOM 8 O4' A B 140 59.602 124.597 39.386 1.00 48.28 O
ATOM 9 C3' A B 140 60.878 122.641 39.463 1.00 48.35 C
ATOM 10 O3' A B 140 61.000 121.417 40.182 1.00 45.74 O
ATOM 11 C2' A B 140 59.915 122.520 38.285 1.00 47.98 C
ATOM 12 O2' A B 140 58.770 121.760 38.614 1.00 47.70 O
ATOM 13 C1' A B 140 59.454 123.970 38.122 1.00 48.04 C
ATOM 14 N9 A B 140 60.206 124.745 37.130 1.00 47.29 N
ATOM 15 C8 A B 140 61.172 125.688 37.375 1.00 47.99 C
ATOM 16 N7 A B 140 61.647 126.254 36.296 1.00 46.22 N
ATOM 17 C5 A B 140 60.954 125.640 35.264 1.00 45.15 C
ATOM 18 C6 A B 140 60.996 125.808 33.869 1.00 42.19 C
ATOM 19 N6 A B 140 61.793 126.686 33.258 1.00 39.80 N
ATOM 20 N1 A B 140 60.184 125.037 33.118 1.00 40.97 N
ATOM 21 C2 A B 140 59.385 124.162 33.736 1.00 44.25 C
ATOM 22 N3 A B 140 59.252 123.912 35.039 1.00 46.55 N
ATOM 23 C4 A B 140 60.073 124.697 35.760 1.00 46.50 C
ATOM 24 P C B 141 62.150 120.369 39.799 1.00 44.66 P
ATOM 25 OP1 C B 141 61.950 119.149 40.619 1.00 44.49 O
ATOM 26 OP2 C B 141 63.455 121.068 39.837 1.00 45.43 O
ATOM 27 O5' C B 141 61.792 119.965 38.301 1.00 44.20 O
TER

Atoms:
OP1: (63.990,127.122,21.039)
OP2: (63.855,127.651,23.535)
C3': (59.711,124.227,23.030)
C1': (60.461,124.498,25.233)
C5': (62.132,124.633,22.127)
O6: (61.398,127.068,30.579)
O4': (61.609,124.208,24.467)
C8: (61.408,126.590,26.313)
C2: (59.980,123.987,29.527)
C6: (61.020,126.187,29.796)
C5: (61.093,126.171,28.377)
C4: (60.622,125.070,27.700)
P: (63.779,126.671,22.432)
C4': (61.208,123.922,23.097)
C2': (59.491,125.125,24.243)
O2': (58.182,125.017,24.767)
N1: (60.435,125.027,30.290)
N2: (59.411,122.982,30.193)
N3: (60.064,123.946,28.208)
N7: (61.583,127.119,27.493)
N9: (60.822,125.352,26.363)
O5': (62.333,125.995,22.516)
O3': (59.020,123.018,23.315)
OP1: (62.164,126.850,42.693)
OP2: (62.640,127.683,40.318)
C3': (60.878,122.641,39.463)
C1': (59.454,123.970,38.122)
C5': (60.996,124.386,41.363)
O4': (59.602,124.597,39.386)
C8: (61.172,125.688,37.375)
O2': (58.770,121.760,38.614)
C6: (60.996,125.808,33.869)
C5: (60.954,125.640,35.264)
C4: (60.073,124.697,35.760)
P: (61.824,126.868,41.253)
C4': (60.164,123.655,40.336)
C2': (59.915,122.520,38.285)
C2: (59.385,124.162,33.736)
N1: (60.184,125.037,33.118)
N3: (59.252,123.912,35.039)
N6: (61.793,126.686,33.258)
N7: (61.647,126.254,36.296)
N9: (60.206,124.745,37.130)
O5': (61.830,125.362,40.734)
O3': (61.000,121.417,40.182)
Image (generated by PyMOL):
PyMOL image
show in jmol