ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A61:A96

Extra

PDB:
ATOM 1 O3' A A 60 46.981 158.247 31.989 1.00 44.67 O
ATOM 2 P G A 61 46.463 158.471 30.489 1.00 48.23 P
ATOM 3 OP1 G A 61 45.913 159.855 30.360 1.00 47.76 O
ATOM 4 OP2 G A 61 45.620 157.297 30.130 1.00 48.26 O
ATOM 5 O5' G A 61 47.802 158.387 29.642 1.00 45.99 O
ATOM 6 C5' G A 61 47.911 158.988 28.352 1.00 45.00 C
ATOM 7 C4' G A 61 49.123 159.875 28.311 1.00 44.85 C
ATOM 8 O4' G A 61 50.200 159.288 29.090 1.00 41.71 O
ATOM 9 C3' G A 61 49.696 160.078 26.924 1.00 46.54 C
ATOM 10 O3' G A 61 48.979 161.104 26.234 1.00 49.69 O
ATOM 11 C2' G A 61 51.156 160.399 27.233 1.00 44.16 C
ATOM 12 O2' G A 61 51.346 161.723 27.701 1.00 44.54 O
ATOM 13 C1' G A 61 51.427 159.451 28.406 1.00 41.47 C
ATOM 14 N9 G A 61 51.888 158.118 28.025 1.00 39.15 N
ATOM 15 C8 G A 61 51.215 156.939 28.219 1.00 38.78 C
ATOM 16 N7 G A 61 51.869 155.894 27.787 1.00 38.36 N
ATOM 17 C5 G A 61 53.046 156.411 27.274 1.00 38.37 C
ATOM 18 C6 G A 61 54.152 155.755 26.670 1.00 38.79 C
ATOM 19 O6 G A 61 54.313 154.550 26.463 1.00 40.85 O
ATOM 20 N1 G A 61 55.141 156.655 26.296 1.00 38.64 N
ATOM 21 C2 G A 61 55.080 158.011 26.483 1.00 40.24 C
ATOM 22 N2 G A 61 56.146 158.714 26.065 1.00 41.67 N
ATOM 23 N3 G A 61 54.053 158.638 27.044 1.00 40.02 N
ATOM 24 C4 G A 61 53.078 157.783 27.412 1.00 38.97 C
ATOM 25 P C A 62 48.436 160.837 24.740 1.00 51.02 P
ATOM 26 OP1 C A 62 47.511 161.962 24.433 1.00 50.65 O
ATOM 27 OP2 C A 62 47.955 159.439 24.590 1.00 49.97 O
ATOM 28 O5' C A 62 49.740 160.998 23.841 1.00 49.98 O
TER

ATOM 1 O3' G B 95 59.179 151.688 15.721 1.00 49.99 O
ATOM 2 P A B 96 60.193 152.118 16.900 1.00 49.53 P
ATOM 3 OP1 A B 96 61.518 152.374 16.294 1.00 48.52 O
ATOM 4 OP2 A B 96 60.069 151.147 18.031 1.00 49.46 O
ATOM 5 O5' A B 96 59.635 153.529 17.371 1.00 45.11 O
ATOM 6 C5' A B 96 59.705 154.654 16.490 1.00 43.16 C
ATOM 7 C4' A B 96 59.401 155.926 17.238 1.00 41.93 C
ATOM 8 O4' A B 96 58.020 155.914 17.679 1.00 42.05 O
ATOM 9 C3' A B 96 60.201 156.190 18.506 1.00 40.77 C
ATOM 10 O3' A B 96 61.485 156.744 18.224 1.00 40.33 O
ATOM 11 C2' A B 96 59.297 157.171 19.239 1.00 40.34 C
ATOM 12 O2' A B 96 59.382 158.479 18.739 1.00 38.08 O
ATOM 13 C1' A B 96 57.911 156.615 18.905 1.00 42.06 C
ATOM 14 N9 A B 96 57.456 155.680 19.926 1.00 42.80 N
ATOM 15 C8 A B 96 57.505 154.311 19.896 1.00 43.73 C
ATOM 16 N7 A B 96 57.038 153.742 20.980 1.00 44.84 N
ATOM 17 C5 A B 96 56.656 154.811 21.779 1.00 44.15 C
ATOM 18 C6 A B 96 56.093 154.878 23.067 1.00 44.09 C
ATOM 19 N6 A B 96 55.800 153.808 23.805 1.00 44.00 N
ATOM 20 N1 A B 96 55.838 156.103 23.577 1.00 45.29 N
ATOM 21 C2 A B 96 56.128 157.180 22.833 1.00 44.66 C
ATOM 22 N3 A B 96 56.653 157.243 21.611 1.00 44.32 N
ATOM 23 C4 A B 96 56.900 156.010 21.138 1.00 43.42 C
ATOM 24 P U B 97 62.740 156.398 19.177 1.00 39.96 P
ATOM 25 OP1 U B 97 63.930 157.098 18.630 1.00 40.69 O
ATOM 26 OP2 U B 97 62.788 154.937 19.372 1.00 40.63 O
ATOM 27 O5' U B 97 62.374 157.094 20.563 1.00 39.46 O
TER

Atoms:
OP1: (45.913,159.855,30.360)
OP2: (45.620,157.297,30.130)
C3': (49.696,160.078,26.924)
C1': (51.427,159.451,28.406)
C5': (47.911,158.988,28.352)
O6: (54.313,154.550,26.463)
O4': (50.200,159.288,29.090)
C8: (51.215,156.939,28.219)
C2: (55.080,158.011,26.483)
C6: (54.152,155.755,26.670)
C5: (53.046,156.411,27.274)
C4: (53.078,157.783,27.412)
P: (46.463,158.471,30.489)
C4': (49.123,159.875,28.311)
C2': (51.156,160.399,27.233)
O2': (51.346,161.723,27.701)
N1: (55.141,156.655,26.296)
N2: (56.146,158.714,26.065)
N3: (54.053,158.638,27.044)
N7: (51.869,155.894,27.787)
N9: (51.888,158.118,28.025)
O5': (47.802,158.387,29.642)
O3': (48.979,161.104,26.234)
OP1: (61.518,152.374,16.294)
OP2: (60.069,151.147,18.031)
C3': (60.201,156.190,18.506)
C1': (57.911,156.615,18.905)
C5': (59.705,154.654,16.490)
O4': (58.020,155.914,17.679)
C8: (57.505,154.311,19.896)
O2': (59.382,158.479,18.739)
C6: (56.093,154.878,23.067)
C5: (56.656,154.811,21.779)
C4: (56.900,156.010,21.138)
P: (60.193,152.118,16.900)
C4': (59.401,155.926,17.238)
C2': (59.297,157.171,19.239)
C2: (56.128,157.180,22.833)
N1: (55.838,156.103,23.577)
N3: (56.653,157.243,21.611)
N6: (55.800,153.808,23.805)
N7: (57.038,153.742,20.980)
N9: (57.456,155.680,19.926)
O5': (59.635,153.529,17.371)
O3': (61.485,156.744,18.224)
Image (generated by PyMOL):
PyMOL image
show in jmol