Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2422:2409
Extra
PDB:
ATOM 1 O3' G A 421 -36.425 64.343 48.099 1.00 85.98 O
ATOM 2 P G A 422 -37.386 64.125 49.374 1.00 81.80 P
ATOM 3 OP1 G A 422 -38.392 65.212 49.354 1.00 82.47 O
ATOM 4 OP2 G A 422 -36.525 63.972 50.580 1.00 81.02 O
ATOM 5 O5' G A 422 -38.089 62.755 49.033 1.00 81.65 O
ATOM 6 C5' G A 422 -39.290 62.412 49.670 1.00 81.58 C
ATOM 7 C4' G A 422 -39.320 60.974 50.078 1.00 80.93 C
ATOM 8 O4' G A 422 -37.967 60.460 50.221 1.00 80.35 O
ATOM 9 C3' G A 422 -40.008 60.719 51.395 1.00 80.48 C
ATOM 10 O3' G A 422 -40.686 59.475 51.303 1.00 80.32 O
ATOM 11 C2' G A 422 -38.838 60.621 52.342 1.00 79.75 C
ATOM 12 O2' G A 422 -39.116 59.969 53.551 1.00 79.15 O
ATOM 13 C1' G A 422 -37.845 59.861 51.479 1.00 79.60 C
ATOM 14 N9 G A 422 -36.452 59.974 51.911 1.00 79.13 N
ATOM 15 C8 G A 422 -35.775 61.135 52.144 1.00 79.25 C
ATOM 16 N7 G A 422 -34.538 60.965 52.522 1.00 78.77 N
ATOM 17 C5 G A 422 -34.375 59.598 52.545 1.00 78.31 C
ATOM 18 C6 G A 422 -33.233 58.833 52.891 1.00 77.72 C
ATOM 19 O6 G A 422 -32.117 59.220 53.249 1.00 77.50 O
ATOM 20 N1 G A 422 -33.485 57.483 52.784 1.00 77.43 N
ATOM 21 C2 G A 422 -34.678 56.952 52.397 1.00 77.67 C
ATOM 22 N2 G A 422 -34.725 55.617 52.360 1.00 77.34 N
ATOM 23 N3 G A 422 -35.753 57.655 52.076 1.00 78.22 N
ATOM 24 C4 G A 422 -35.543 58.974 52.169 1.00 78.52 C
ATOM 25 P C A 423 -42.019 59.404 50.423 1.00 64.83 P
ATOM 26 OP1 C A 423 -41.713 58.761 49.146 1.00 65.10 O
ATOM 27 OP2 C A 423 -42.533 60.741 50.400 1.00 65.43 O
ATOM 28 O5' C A 423 -42.953 58.469 51.254 1.00 64.49 O
TER
ATOM 1 O3' C B 408 -24.578 52.659 59.015 1.00 53.78 O
ATOM 2 P A B 409 -24.382 52.261 57.480 1.00 58.25 P
ATOM 3 OP1 A B 409 -23.479 51.081 57.459 1.00 57.97 O
ATOM 4 OP2 A B 409 -23.991 53.498 56.749 1.00 58.70 O
ATOM 5 O5' A B 409 -25.831 51.798 57.042 1.00 58.39 O
ATOM 6 C5' A B 409 -26.395 50.632 57.610 1.00 58.04 C
ATOM 7 C4' A B 409 -27.746 50.348 57.031 1.00 58.29 C
ATOM 8 O4' A B 409 -28.714 51.328 57.516 1.00 58.43 O
ATOM 9 C3' A B 409 -27.851 50.444 55.515 1.00 58.80 C
ATOM 10 O3' A B 409 -27.345 49.292 54.843 1.00 58.77 O
ATOM 11 C2' A B 409 -29.343 50.683 55.329 1.00 59.08 C
ATOM 12 O2' A B 409 -30.065 49.491 55.541 1.00 58.89 O
ATOM 13 C1' A B 409 -29.626 51.635 56.489 1.00 58.93 C
ATOM 14 N9 A B 409 -29.387 53.014 56.093 1.00 59.31 N
ATOM 15 C8 A B 409 -28.244 53.719 56.319 1.00 59.26 C
ATOM 16 N7 A B 409 -28.313 54.934 55.827 1.00 59.71 N
ATOM 17 C5 A B 409 -29.581 55.010 55.242 1.00 60.08 C
ATOM 18 C6 A B 409 -30.265 56.028 54.559 1.00 60.67 C
ATOM 19 N6 A B 409 -29.760 57.228 54.331 1.00 60.99 N
ATOM 20 N1 A B 409 -31.512 55.763 54.113 1.00 60.95 N
ATOM 21 C2 A B 409 -32.044 54.553 54.338 1.00 60.66 C
ATOM 22 N3 A B 409 -31.511 53.505 54.964 1.00 60.11 N
ATOM 23 C4 A B 409 -30.258 53.809 55.392 1.00 59.84 C
ATOM 24 P C B 410 -27.265 49.230 53.223 1.00 65.75 P
ATOM 25 OP1 C B 410 -26.910 47.826 52.864 1.00 65.62 O
ATOM 26 OP2 C B 410 -26.388 50.331 52.755 1.00 66.03 O
ATOM 27 O5' C B 410 -28.767 49.533 52.798 1.00 66.13 O
TER
ATOM 2 P G A 422 -37.386 64.125 49.374 1.00 81.80 P
ATOM 3 OP1 G A 422 -38.392 65.212 49.354 1.00 82.47 O
ATOM 4 OP2 G A 422 -36.525 63.972 50.580 1.00 81.02 O
ATOM 5 O5' G A 422 -38.089 62.755 49.033 1.00 81.65 O
ATOM 6 C5' G A 422 -39.290 62.412 49.670 1.00 81.58 C
ATOM 7 C4' G A 422 -39.320 60.974 50.078 1.00 80.93 C
ATOM 8 O4' G A 422 -37.967 60.460 50.221 1.00 80.35 O
ATOM 9 C3' G A 422 -40.008 60.719 51.395 1.00 80.48 C
ATOM 10 O3' G A 422 -40.686 59.475 51.303 1.00 80.32 O
ATOM 11 C2' G A 422 -38.838 60.621 52.342 1.00 79.75 C
ATOM 12 O2' G A 422 -39.116 59.969 53.551 1.00 79.15 O
ATOM 13 C1' G A 422 -37.845 59.861 51.479 1.00 79.60 C
ATOM 14 N9 G A 422 -36.452 59.974 51.911 1.00 79.13 N
ATOM 15 C8 G A 422 -35.775 61.135 52.144 1.00 79.25 C
ATOM 16 N7 G A 422 -34.538 60.965 52.522 1.00 78.77 N
ATOM 17 C5 G A 422 -34.375 59.598 52.545 1.00 78.31 C
ATOM 18 C6 G A 422 -33.233 58.833 52.891 1.00 77.72 C
ATOM 19 O6 G A 422 -32.117 59.220 53.249 1.00 77.50 O
ATOM 20 N1 G A 422 -33.485 57.483 52.784 1.00 77.43 N
ATOM 21 C2 G A 422 -34.678 56.952 52.397 1.00 77.67 C
ATOM 22 N2 G A 422 -34.725 55.617 52.360 1.00 77.34 N
ATOM 23 N3 G A 422 -35.753 57.655 52.076 1.00 78.22 N
ATOM 24 C4 G A 422 -35.543 58.974 52.169 1.00 78.52 C
ATOM 25 P C A 423 -42.019 59.404 50.423 1.00 64.83 P
ATOM 26 OP1 C A 423 -41.713 58.761 49.146 1.00 65.10 O
ATOM 27 OP2 C A 423 -42.533 60.741 50.400 1.00 65.43 O
ATOM 28 O5' C A 423 -42.953 58.469 51.254 1.00 64.49 O
TER
ATOM 1 O3' C B 408 -24.578 52.659 59.015 1.00 53.78 O
ATOM 2 P A B 409 -24.382 52.261 57.480 1.00 58.25 P
ATOM 3 OP1 A B 409 -23.479 51.081 57.459 1.00 57.97 O
ATOM 4 OP2 A B 409 -23.991 53.498 56.749 1.00 58.70 O
ATOM 5 O5' A B 409 -25.831 51.798 57.042 1.00 58.39 O
ATOM 6 C5' A B 409 -26.395 50.632 57.610 1.00 58.04 C
ATOM 7 C4' A B 409 -27.746 50.348 57.031 1.00 58.29 C
ATOM 8 O4' A B 409 -28.714 51.328 57.516 1.00 58.43 O
ATOM 9 C3' A B 409 -27.851 50.444 55.515 1.00 58.80 C
ATOM 10 O3' A B 409 -27.345 49.292 54.843 1.00 58.77 O
ATOM 11 C2' A B 409 -29.343 50.683 55.329 1.00 59.08 C
ATOM 12 O2' A B 409 -30.065 49.491 55.541 1.00 58.89 O
ATOM 13 C1' A B 409 -29.626 51.635 56.489 1.00 58.93 C
ATOM 14 N9 A B 409 -29.387 53.014 56.093 1.00 59.31 N
ATOM 15 C8 A B 409 -28.244 53.719 56.319 1.00 59.26 C
ATOM 16 N7 A B 409 -28.313 54.934 55.827 1.00 59.71 N
ATOM 17 C5 A B 409 -29.581 55.010 55.242 1.00 60.08 C
ATOM 18 C6 A B 409 -30.265 56.028 54.559 1.00 60.67 C
ATOM 19 N6 A B 409 -29.760 57.228 54.331 1.00 60.99 N
ATOM 20 N1 A B 409 -31.512 55.763 54.113 1.00 60.95 N
ATOM 21 C2 A B 409 -32.044 54.553 54.338 1.00 60.66 C
ATOM 22 N3 A B 409 -31.511 53.505 54.964 1.00 60.11 N
ATOM 23 C4 A B 409 -30.258 53.809 55.392 1.00 59.84 C
ATOM 24 P C B 410 -27.265 49.230 53.223 1.00 65.75 P
ATOM 25 OP1 C B 410 -26.910 47.826 52.864 1.00 65.62 O
ATOM 26 OP2 C B 410 -26.388 50.331 52.755 1.00 66.03 O
ATOM 27 O5' C B 410 -28.767 49.533 52.798 1.00 66.13 O
TER
Atoms:
OP1: (-38.392,65.212,49.354)
OP2: (-36.525,63.972,50.580)
C3': (-40.008,60.719,51.395)
C1': (-37.845,59.861,51.479)
C5': (-39.290,62.412,49.670)
O6: (-32.117,59.220,53.249)
O4': (-37.967,60.460,50.221)
C8: (-35.775,61.135,52.144)
C2: (-34.678,56.952,52.397)
C6: (-33.233,58.833,52.891)
C5: (-34.375,59.598,52.545)
C4: (-35.543,58.974,52.169)
P: (-37.386,64.125,49.374)
C4': (-39.320,60.974,50.078)
C2': (-38.838,60.621,52.342)
O2': (-39.116,59.969,53.551)
N1: (-33.485,57.483,52.784)
N2: (-34.725,55.617,52.360)
N3: (-35.753,57.655,52.076)
N7: (-34.538,60.965,52.522)
N9: (-36.452,59.974,51.911)
O5': (-38.089,62.755,49.033)
O3': (-40.686,59.475,51.303)
OP2: (-36.525,63.972,50.580)
C3': (-40.008,60.719,51.395)
C1': (-37.845,59.861,51.479)
C5': (-39.290,62.412,49.670)
O6: (-32.117,59.220,53.249)
O4': (-37.967,60.460,50.221)
C8: (-35.775,61.135,52.144)
C2: (-34.678,56.952,52.397)
C6: (-33.233,58.833,52.891)
C5: (-34.375,59.598,52.545)
C4: (-35.543,58.974,52.169)
P: (-37.386,64.125,49.374)
C4': (-39.320,60.974,50.078)
C2': (-38.838,60.621,52.342)
O2': (-39.116,59.969,53.551)
N1: (-33.485,57.483,52.784)
N2: (-34.725,55.617,52.360)
N3: (-35.753,57.655,52.076)
N7: (-34.538,60.965,52.522)
N9: (-36.452,59.974,51.911)
O5': (-38.089,62.755,49.033)
O3': (-40.686,59.475,51.303)
OP1: (-23.479,51.081,57.459)
OP2: (-23.991,53.498,56.749)
C3': (-27.851,50.444,55.515)
C1': (-29.626,51.635,56.489)
C5': (-26.395,50.632,57.610)
O4': (-28.714,51.328,57.516)
C8: (-28.244,53.719,56.319)
O2': (-30.065,49.491,55.541)
C6: (-30.265,56.028,54.559)
C5: (-29.581,55.010,55.242)
C4: (-30.258,53.809,55.392)
P: (-24.382,52.261,57.480)
C4': (-27.746,50.348,57.031)
C2': (-29.343,50.683,55.329)
C2: (-32.044,54.553,54.338)
N1: (-31.512,55.763,54.113)
N3: (-31.511,53.505,54.964)
N6: (-29.760,57.228,54.331)
N7: (-28.313,54.934,55.827)
N9: (-29.387,53.014,56.093)
O5': (-25.831,51.798,57.042)
O3': (-27.345,49.292,54.843)
OP2: (-23.991,53.498,56.749)
C3': (-27.851,50.444,55.515)
C1': (-29.626,51.635,56.489)
C5': (-26.395,50.632,57.610)
O4': (-28.714,51.328,57.516)
C8: (-28.244,53.719,56.319)
O2': (-30.065,49.491,55.541)
C6: (-30.265,56.028,54.559)
C5: (-29.581,55.010,55.242)
C4: (-30.258,53.809,55.392)
P: (-24.382,52.261,57.480)
C4': (-27.746,50.348,57.031)
C2': (-29.343,50.683,55.329)
C2: (-32.044,54.553,54.338)
N1: (-31.512,55.763,54.113)
N3: (-31.511,53.505,54.964)
N6: (-29.760,57.228,54.331)
N7: (-28.313,54.934,55.827)
N9: (-29.387,53.014,56.093)
O5': (-25.831,51.798,57.042)
O3': (-27.345,49.292,54.843)
Image (generated by PyMOL):