Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:556:523
Extra
PDB:
ATOM 1 O3' G A 55 128.106 -28.590 171.204 1.00 55.65 O
ATOM 2 P G A 56 127.126 -27.687 170.309 1.00 60.22 P
ATOM 3 OP1 G A 56 127.272 -28.147 168.922 1.00 60.96 O
ATOM 4 OP2 G A 56 127.470 -26.263 170.638 1.00 59.74 O
ATOM 5 O5' G A 56 125.649 -28.016 170.885 1.00 60.16 O
ATOM 6 C5' G A 56 125.265 -29.324 171.316 1.00 60.28 C
ATOM 7 C4' G A 56 124.633 -29.346 172.721 1.00 59.71 C
ATOM 8 O4' G A 56 125.351 -28.471 173.637 1.00 59.03 O
ATOM 9 C3' G A 56 123.161 -28.952 172.839 1.00 59.73 C
ATOM 10 O3' G A 56 122.530 -29.792 173.809 1.00 59.54 O
ATOM 11 C2' G A 56 123.250 -27.558 173.437 1.00 59.15 C
ATOM 12 O2' G A 56 122.100 -27.150 174.134 1.00 58.89 O
ATOM 13 C1' G A 56 124.416 -27.728 174.379 1.00 58.64 C
ATOM 14 N9 G A 56 125.036 -26.469 174.801 1.00 58.13 N
ATOM 15 C8 G A 56 125.763 -25.638 174.006 1.00 58.25 C
ATOM 16 N7 G A 56 126.215 -24.593 174.644 1.00 57.71 N
ATOM 17 C5 G A 56 125.753 -24.730 175.946 1.00 57.22 C
ATOM 18 C6 G A 56 125.914 -23.884 177.075 1.00 56.55 C
ATOM 19 O6 G A 56 126.519 -22.805 177.178 1.00 56.25 O
ATOM 20 N1 G A 56 125.281 -24.393 178.176 1.00 56.24 N
ATOM 21 C2 G A 56 124.611 -25.558 178.197 1.00 56.53 C
ATOM 22 N2 G A 56 124.110 -25.887 179.380 1.00 56.15 N
ATOM 23 N3 G A 56 124.431 -26.340 177.157 1.00 57.14 N
ATOM 24 C4 G A 56 125.026 -25.879 176.054 1.00 57.47 C
ATOM 25 P A A 57 121.995 -31.268 173.436 1.00 56.74 P
ATOM 26 OP1 A A 57 122.810 -31.769 172.262 1.00 57.29 O
ATOM 27 OP2 A A 57 120.541 -31.172 173.307 1.00 56.95 O
ATOM 28 O5' A A 57 122.358 -32.105 174.747 1.00 56.30 O
TER
ATOM 1 O3' U B 22 130.224 -19.250 184.279 1.00 69.85 O
ATOM 2 P A B 23 130.334 -18.778 185.822 1.00 58.00 P
ATOM 3 OP1 A B 23 129.792 -17.395 185.906 1.00 57.80 O
ATOM 4 OP2 A B 23 131.736 -19.038 186.255 1.00 57.77 O
ATOM 5 O5' A B 23 129.341 -19.771 186.566 1.00 57.97 O
ATOM 6 C5' A B 23 128.197 -19.286 187.251 1.00 57.73 C
ATOM 7 C4' A B 23 127.102 -20.310 187.243 1.00 58.01 C
ATOM 8 O4' A B 23 126.234 -20.065 186.113 1.00 58.48 O
ATOM 9 C3' A B 23 127.570 -21.740 187.057 1.00 58.28 C
ATOM 10 O3' A B 23 127.901 -22.352 188.274 1.00 57.91 O
ATOM 11 C2' A B 23 126.403 -22.401 186.376 1.00 58.76 C
ATOM 12 O2' A B 23 125.422 -22.714 187.336 1.00 58.56 O
ATOM 13 C1' A B 23 125.874 -21.275 185.505 1.00 58.95 C
ATOM 14 N9 A B 23 126.444 -21.287 184.150 1.00 59.41 N
ATOM 15 C8 A B 23 127.439 -20.463 183.744 1.00 59.33 C
ATOM 16 N7 A B 23 127.752 -20.627 182.500 1.00 59.82 N
ATOM 17 C5 A B 23 126.894 -21.606 182.049 1.00 60.25 C
ATOM 18 C6 A B 23 126.741 -22.209 180.797 1.00 60.88 C
ATOM 19 N6 A B 23 127.487 -21.877 179.754 1.00 61.18 N
ATOM 20 N1 A B 23 125.794 -23.145 180.634 1.00 61.21 N
ATOM 21 C2 A B 23 125.062 -23.467 181.701 1.00 60.91 C
ATOM 22 N3 A B 23 125.111 -22.974 182.939 1.00 60.32 N
ATOM 23 C4 A B 23 126.068 -22.027 183.051 1.00 60.01 C
ATOM 24 P C B 24 129.013 -23.501 188.315 1.00 49.64 P
ATOM 25 OP1 C B 24 129.034 -24.014 189.699 1.00 49.23 O
ATOM 26 OP2 C B 24 130.250 -22.934 187.738 1.00 49.64 O
ATOM 27 O5' C B 24 128.438 -24.601 187.318 1.00 50.26 O
TER
ATOM 2 P G A 56 127.126 -27.687 170.309 1.00 60.22 P
ATOM 3 OP1 G A 56 127.272 -28.147 168.922 1.00 60.96 O
ATOM 4 OP2 G A 56 127.470 -26.263 170.638 1.00 59.74 O
ATOM 5 O5' G A 56 125.649 -28.016 170.885 1.00 60.16 O
ATOM 6 C5' G A 56 125.265 -29.324 171.316 1.00 60.28 C
ATOM 7 C4' G A 56 124.633 -29.346 172.721 1.00 59.71 C
ATOM 8 O4' G A 56 125.351 -28.471 173.637 1.00 59.03 O
ATOM 9 C3' G A 56 123.161 -28.952 172.839 1.00 59.73 C
ATOM 10 O3' G A 56 122.530 -29.792 173.809 1.00 59.54 O
ATOM 11 C2' G A 56 123.250 -27.558 173.437 1.00 59.15 C
ATOM 12 O2' G A 56 122.100 -27.150 174.134 1.00 58.89 O
ATOM 13 C1' G A 56 124.416 -27.728 174.379 1.00 58.64 C
ATOM 14 N9 G A 56 125.036 -26.469 174.801 1.00 58.13 N
ATOM 15 C8 G A 56 125.763 -25.638 174.006 1.00 58.25 C
ATOM 16 N7 G A 56 126.215 -24.593 174.644 1.00 57.71 N
ATOM 17 C5 G A 56 125.753 -24.730 175.946 1.00 57.22 C
ATOM 18 C6 G A 56 125.914 -23.884 177.075 1.00 56.55 C
ATOM 19 O6 G A 56 126.519 -22.805 177.178 1.00 56.25 O
ATOM 20 N1 G A 56 125.281 -24.393 178.176 1.00 56.24 N
ATOM 21 C2 G A 56 124.611 -25.558 178.197 1.00 56.53 C
ATOM 22 N2 G A 56 124.110 -25.887 179.380 1.00 56.15 N
ATOM 23 N3 G A 56 124.431 -26.340 177.157 1.00 57.14 N
ATOM 24 C4 G A 56 125.026 -25.879 176.054 1.00 57.47 C
ATOM 25 P A A 57 121.995 -31.268 173.436 1.00 56.74 P
ATOM 26 OP1 A A 57 122.810 -31.769 172.262 1.00 57.29 O
ATOM 27 OP2 A A 57 120.541 -31.172 173.307 1.00 56.95 O
ATOM 28 O5' A A 57 122.358 -32.105 174.747 1.00 56.30 O
TER
ATOM 1 O3' U B 22 130.224 -19.250 184.279 1.00 69.85 O
ATOM 2 P A B 23 130.334 -18.778 185.822 1.00 58.00 P
ATOM 3 OP1 A B 23 129.792 -17.395 185.906 1.00 57.80 O
ATOM 4 OP2 A B 23 131.736 -19.038 186.255 1.00 57.77 O
ATOM 5 O5' A B 23 129.341 -19.771 186.566 1.00 57.97 O
ATOM 6 C5' A B 23 128.197 -19.286 187.251 1.00 57.73 C
ATOM 7 C4' A B 23 127.102 -20.310 187.243 1.00 58.01 C
ATOM 8 O4' A B 23 126.234 -20.065 186.113 1.00 58.48 O
ATOM 9 C3' A B 23 127.570 -21.740 187.057 1.00 58.28 C
ATOM 10 O3' A B 23 127.901 -22.352 188.274 1.00 57.91 O
ATOM 11 C2' A B 23 126.403 -22.401 186.376 1.00 58.76 C
ATOM 12 O2' A B 23 125.422 -22.714 187.336 1.00 58.56 O
ATOM 13 C1' A B 23 125.874 -21.275 185.505 1.00 58.95 C
ATOM 14 N9 A B 23 126.444 -21.287 184.150 1.00 59.41 N
ATOM 15 C8 A B 23 127.439 -20.463 183.744 1.00 59.33 C
ATOM 16 N7 A B 23 127.752 -20.627 182.500 1.00 59.82 N
ATOM 17 C5 A B 23 126.894 -21.606 182.049 1.00 60.25 C
ATOM 18 C6 A B 23 126.741 -22.209 180.797 1.00 60.88 C
ATOM 19 N6 A B 23 127.487 -21.877 179.754 1.00 61.18 N
ATOM 20 N1 A B 23 125.794 -23.145 180.634 1.00 61.21 N
ATOM 21 C2 A B 23 125.062 -23.467 181.701 1.00 60.91 C
ATOM 22 N3 A B 23 125.111 -22.974 182.939 1.00 60.32 N
ATOM 23 C4 A B 23 126.068 -22.027 183.051 1.00 60.01 C
ATOM 24 P C B 24 129.013 -23.501 188.315 1.00 49.64 P
ATOM 25 OP1 C B 24 129.034 -24.014 189.699 1.00 49.23 O
ATOM 26 OP2 C B 24 130.250 -22.934 187.738 1.00 49.64 O
ATOM 27 O5' C B 24 128.438 -24.601 187.318 1.00 50.26 O
TER
Atoms:
OP1: (127.272,-28.147,168.922)
OP2: (127.470,-26.263,170.638)
C3': (123.161,-28.952,172.839)
C1': (124.416,-27.728,174.379)
C5': (125.265,-29.324,171.316)
O6: (126.519,-22.805,177.178)
O4': (125.351,-28.471,173.637)
C8: (125.763,-25.638,174.006)
C2: (124.611,-25.558,178.197)
C6: (125.914,-23.884,177.075)
C5: (125.753,-24.730,175.946)
C4: (125.026,-25.879,176.054)
P: (127.126,-27.687,170.309)
C4': (124.633,-29.346,172.721)
C2': (123.250,-27.558,173.437)
O2': (122.100,-27.150,174.134)
N1: (125.281,-24.393,178.176)
N2: (124.110,-25.887,179.380)
N3: (124.431,-26.340,177.157)
N7: (126.215,-24.593,174.644)
N9: (125.036,-26.469,174.801)
O5': (125.649,-28.016,170.885)
O3': (122.530,-29.792,173.809)
OP2: (127.470,-26.263,170.638)
C3': (123.161,-28.952,172.839)
C1': (124.416,-27.728,174.379)
C5': (125.265,-29.324,171.316)
O6: (126.519,-22.805,177.178)
O4': (125.351,-28.471,173.637)
C8: (125.763,-25.638,174.006)
C2: (124.611,-25.558,178.197)
C6: (125.914,-23.884,177.075)
C5: (125.753,-24.730,175.946)
C4: (125.026,-25.879,176.054)
P: (127.126,-27.687,170.309)
C4': (124.633,-29.346,172.721)
C2': (123.250,-27.558,173.437)
O2': (122.100,-27.150,174.134)
N1: (125.281,-24.393,178.176)
N2: (124.110,-25.887,179.380)
N3: (124.431,-26.340,177.157)
N7: (126.215,-24.593,174.644)
N9: (125.036,-26.469,174.801)
O5': (125.649,-28.016,170.885)
O3': (122.530,-29.792,173.809)
OP1: (129.792,-17.395,185.906)
OP2: (131.736,-19.038,186.255)
C3': (127.570,-21.740,187.057)
C1': (125.874,-21.275,185.505)
C5': (128.197,-19.286,187.251)
O4': (126.234,-20.065,186.113)
C8: (127.439,-20.463,183.744)
O2': (125.422,-22.714,187.336)
C6: (126.741,-22.209,180.797)
C5: (126.894,-21.606,182.049)
C4: (126.068,-22.027,183.051)
P: (130.334,-18.778,185.822)
C4': (127.102,-20.310,187.243)
C2': (126.403,-22.401,186.376)
C2: (125.062,-23.467,181.701)
N1: (125.794,-23.145,180.634)
N3: (125.111,-22.974,182.939)
N6: (127.487,-21.877,179.754)
N7: (127.752,-20.627,182.500)
N9: (126.444,-21.287,184.150)
O5': (129.341,-19.771,186.566)
O3': (127.901,-22.352,188.274)
OP2: (131.736,-19.038,186.255)
C3': (127.570,-21.740,187.057)
C1': (125.874,-21.275,185.505)
C5': (128.197,-19.286,187.251)
O4': (126.234,-20.065,186.113)
C8: (127.439,-20.463,183.744)
O2': (125.422,-22.714,187.336)
C6: (126.741,-22.209,180.797)
C5: (126.894,-21.606,182.049)
C4: (126.068,-22.027,183.051)
P: (130.334,-18.778,185.822)
C4': (127.102,-20.310,187.243)
C2': (126.403,-22.401,186.376)
C2: (125.062,-23.467,181.701)
N1: (125.794,-23.145,180.634)
N3: (125.111,-22.974,182.939)
N6: (127.487,-21.877,179.754)
N7: (127.752,-20.627,182.500)
N9: (126.444,-21.287,184.150)
O5': (129.341,-19.771,186.566)
O3': (127.901,-22.352,188.274)
Image (generated by PyMOL):