Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NPN:A4:A33
Extra
PDB:
ATOM 1 O3' C A 3 112.146 79.372 -1.264 1.00 61.37 O
ATOM 2 P G A 4 112.701 78.519 -2.499 1.00 61.35 P
ATOM 3 OP1 G A 4 111.532 78.018 -3.257 1.00 62.07 O
ATOM 4 OP2 G A 4 113.714 77.557 -2.007 1.00 60.75 O
ATOM 5 O5' G A 4 113.462 79.630 -3.363 1.00 61.42 O
ATOM 6 C5' G A 4 112.712 80.607 -4.081 1.00 62.35 C
ATOM 7 C4' G A 4 113.585 81.760 -4.542 1.00 62.50 C
ATOM 8 O4' G A 4 114.282 82.335 -3.406 1.00 62.40 O
ATOM 9 C3' G A 4 114.708 81.406 -5.507 1.00 62.31 C
ATOM 10 O3' G A 4 114.240 81.267 -6.842 1.00 62.98 O
ATOM 11 C2' G A 4 115.619 82.613 -5.323 1.00 62.57 C
ATOM 12 O2' G A 4 115.137 83.795 -5.935 1.00 63.23 O
ATOM 13 C1' G A 4 115.583 82.734 -3.803 1.00 62.39 C
ATOM 14 N9 G A 4 116.586 81.877 -3.166 1.00 62.21 N
ATOM 15 C8 G A 4 116.387 80.708 -2.470 1.00 61.90 C
ATOM 16 N7 G A 4 117.485 80.162 -2.027 1.00 61.63 N
ATOM 17 C5 G A 4 118.482 81.020 -2.462 1.00 61.97 C
ATOM 18 C6 G A 4 119.885 80.955 -2.287 1.00 62.36 C
ATOM 19 O6 G A 4 120.552 80.095 -1.693 1.00 62.08 O
ATOM 20 N1 G A 4 120.525 82.034 -2.893 1.00 63.10 N
ATOM 21 C2 G A 4 119.902 83.050 -3.580 1.00 63.60 C
ATOM 22 N2 G A 4 120.689 84.006 -4.095 1.00 64.72 N
ATOM 23 N3 G A 4 118.590 83.121 -3.749 1.00 63.29 N
ATOM 24 C4 G A 4 117.946 82.078 -3.166 1.00 62.40 C
ATOM 25 P A A 5 114.890 80.164 -7.808 1.00 63.11 P
ATOM 26 OP1 A A 5 114.129 80.183 -9.079 1.00 64.02 O
ATOM 27 OP2 A A 5 115.031 78.898 -7.049 1.00 61.97 O
ATOM 28 O5' A A 5 116.359 80.736 -8.077 1.00 63.21 O
TER
ATOM 1 O3' U B 32 131.092 81.885 -1.980 1.00 75.34 O
ATOM 2 P A B 33 130.605 82.961 -0.897 1.00 74.86 P
ATOM 3 OP1 A B 33 131.814 83.643 -0.386 1.00 77.14 O
ATOM 4 OP2 A B 33 129.679 82.299 0.050 1.00 73.13 O
ATOM 5 O5' A B 33 129.725 83.993 -1.746 1.00 73.86 O
ATOM 6 C5' A B 33 130.251 84.717 -2.855 1.00 75.33 C
ATOM 7 C4' A B 33 129.156 85.014 -3.865 1.00 74.03 C
ATOM 8 O4' A B 33 128.625 83.757 -4.358 1.00 73.03 O
ATOM 9 C3' A B 33 127.938 85.754 -3.316 1.00 72.64 C
ATOM 10 O3' A B 33 128.083 87.170 -3.379 1.00 73.18 O
ATOM 11 C2' A B 33 126.814 85.249 -4.218 1.00 71.27 C
ATOM 12 O2' A B 33 126.763 85.885 -5.481 1.00 72.02 O
ATOM 13 C1' A B 33 127.208 83.788 -4.367 1.00 71.40 C
ATOM 14 N9 A B 33 126.683 82.971 -3.274 1.00 70.81 N
ATOM 15 C8 A B 33 127.363 82.455 -2.206 1.00 71.76 C
ATOM 16 N7 A B 33 126.635 81.759 -1.370 1.00 70.71 N
ATOM 17 C5 A B 33 125.375 81.827 -1.926 1.00 69.14 C
ATOM 18 C6 A B 33 124.141 81.290 -1.518 1.00 67.93 C
ATOM 19 N6 A B 33 123.985 80.556 -0.412 1.00 67.48 N
ATOM 20 N1 A B 33 123.073 81.544 -2.304 1.00 67.44 N
ATOM 21 C2 A B 33 123.239 82.286 -3.411 1.00 67.65 C
ATOM 22 N3 A B 33 124.343 82.842 -3.898 1.00 68.51 N
ATOM 23 C4 A B 33 125.384 82.571 -3.098 1.00 69.35 C
ATOM 24 P G B 34 127.482 88.100 -2.217 1.00 72.39 P
ATOM 25 OP1 G B 34 128.507 89.117 -1.898 1.00 74.44 O
ATOM 26 OP2 G B 34 126.953 87.242 -1.130 1.00 71.23 O
ATOM 27 O5' G B 34 126.252 88.838 -2.933 1.00 71.14 O
TER
ATOM 2 P G A 4 112.701 78.519 -2.499 1.00 61.35 P
ATOM 3 OP1 G A 4 111.532 78.018 -3.257 1.00 62.07 O
ATOM 4 OP2 G A 4 113.714 77.557 -2.007 1.00 60.75 O
ATOM 5 O5' G A 4 113.462 79.630 -3.363 1.00 61.42 O
ATOM 6 C5' G A 4 112.712 80.607 -4.081 1.00 62.35 C
ATOM 7 C4' G A 4 113.585 81.760 -4.542 1.00 62.50 C
ATOM 8 O4' G A 4 114.282 82.335 -3.406 1.00 62.40 O
ATOM 9 C3' G A 4 114.708 81.406 -5.507 1.00 62.31 C
ATOM 10 O3' G A 4 114.240 81.267 -6.842 1.00 62.98 O
ATOM 11 C2' G A 4 115.619 82.613 -5.323 1.00 62.57 C
ATOM 12 O2' G A 4 115.137 83.795 -5.935 1.00 63.23 O
ATOM 13 C1' G A 4 115.583 82.734 -3.803 1.00 62.39 C
ATOM 14 N9 G A 4 116.586 81.877 -3.166 1.00 62.21 N
ATOM 15 C8 G A 4 116.387 80.708 -2.470 1.00 61.90 C
ATOM 16 N7 G A 4 117.485 80.162 -2.027 1.00 61.63 N
ATOM 17 C5 G A 4 118.482 81.020 -2.462 1.00 61.97 C
ATOM 18 C6 G A 4 119.885 80.955 -2.287 1.00 62.36 C
ATOM 19 O6 G A 4 120.552 80.095 -1.693 1.00 62.08 O
ATOM 20 N1 G A 4 120.525 82.034 -2.893 1.00 63.10 N
ATOM 21 C2 G A 4 119.902 83.050 -3.580 1.00 63.60 C
ATOM 22 N2 G A 4 120.689 84.006 -4.095 1.00 64.72 N
ATOM 23 N3 G A 4 118.590 83.121 -3.749 1.00 63.29 N
ATOM 24 C4 G A 4 117.946 82.078 -3.166 1.00 62.40 C
ATOM 25 P A A 5 114.890 80.164 -7.808 1.00 63.11 P
ATOM 26 OP1 A A 5 114.129 80.183 -9.079 1.00 64.02 O
ATOM 27 OP2 A A 5 115.031 78.898 -7.049 1.00 61.97 O
ATOM 28 O5' A A 5 116.359 80.736 -8.077 1.00 63.21 O
TER
ATOM 1 O3' U B 32 131.092 81.885 -1.980 1.00 75.34 O
ATOM 2 P A B 33 130.605 82.961 -0.897 1.00 74.86 P
ATOM 3 OP1 A B 33 131.814 83.643 -0.386 1.00 77.14 O
ATOM 4 OP2 A B 33 129.679 82.299 0.050 1.00 73.13 O
ATOM 5 O5' A B 33 129.725 83.993 -1.746 1.00 73.86 O
ATOM 6 C5' A B 33 130.251 84.717 -2.855 1.00 75.33 C
ATOM 7 C4' A B 33 129.156 85.014 -3.865 1.00 74.03 C
ATOM 8 O4' A B 33 128.625 83.757 -4.358 1.00 73.03 O
ATOM 9 C3' A B 33 127.938 85.754 -3.316 1.00 72.64 C
ATOM 10 O3' A B 33 128.083 87.170 -3.379 1.00 73.18 O
ATOM 11 C2' A B 33 126.814 85.249 -4.218 1.00 71.27 C
ATOM 12 O2' A B 33 126.763 85.885 -5.481 1.00 72.02 O
ATOM 13 C1' A B 33 127.208 83.788 -4.367 1.00 71.40 C
ATOM 14 N9 A B 33 126.683 82.971 -3.274 1.00 70.81 N
ATOM 15 C8 A B 33 127.363 82.455 -2.206 1.00 71.76 C
ATOM 16 N7 A B 33 126.635 81.759 -1.370 1.00 70.71 N
ATOM 17 C5 A B 33 125.375 81.827 -1.926 1.00 69.14 C
ATOM 18 C6 A B 33 124.141 81.290 -1.518 1.00 67.93 C
ATOM 19 N6 A B 33 123.985 80.556 -0.412 1.00 67.48 N
ATOM 20 N1 A B 33 123.073 81.544 -2.304 1.00 67.44 N
ATOM 21 C2 A B 33 123.239 82.286 -3.411 1.00 67.65 C
ATOM 22 N3 A B 33 124.343 82.842 -3.898 1.00 68.51 N
ATOM 23 C4 A B 33 125.384 82.571 -3.098 1.00 69.35 C
ATOM 24 P G B 34 127.482 88.100 -2.217 1.00 72.39 P
ATOM 25 OP1 G B 34 128.507 89.117 -1.898 1.00 74.44 O
ATOM 26 OP2 G B 34 126.953 87.242 -1.130 1.00 71.23 O
ATOM 27 O5' G B 34 126.252 88.838 -2.933 1.00 71.14 O
TER
Atoms:
OP1: (111.532,78.018,-3.257)
OP2: (113.714,77.557,-2.007)
C3': (114.708,81.406,-5.507)
C1': (115.583,82.734,-3.803)
C5': (112.712,80.607,-4.081)
O6: (120.552,80.095,-1.693)
O4': (114.282,82.335,-3.406)
C8: (116.387,80.708,-2.470)
C2: (119.902,83.050,-3.580)
C6: (119.885,80.955,-2.287)
C5: (118.482,81.020,-2.462)
C4: (117.946,82.078,-3.166)
P: (112.701,78.519,-2.499)
C4': (113.585,81.760,-4.542)
C2': (115.619,82.613,-5.323)
O2': (115.137,83.795,-5.935)
N1: (120.525,82.034,-2.893)
N2: (120.689,84.006,-4.095)
N3: (118.590,83.121,-3.749)
N7: (117.485,80.162,-2.027)
N9: (116.586,81.877,-3.166)
O5': (113.462,79.630,-3.363)
O3': (114.240,81.267,-6.842)
OP2: (113.714,77.557,-2.007)
C3': (114.708,81.406,-5.507)
C1': (115.583,82.734,-3.803)
C5': (112.712,80.607,-4.081)
O6: (120.552,80.095,-1.693)
O4': (114.282,82.335,-3.406)
C8: (116.387,80.708,-2.470)
C2: (119.902,83.050,-3.580)
C6: (119.885,80.955,-2.287)
C5: (118.482,81.020,-2.462)
C4: (117.946,82.078,-3.166)
P: (112.701,78.519,-2.499)
C4': (113.585,81.760,-4.542)
C2': (115.619,82.613,-5.323)
O2': (115.137,83.795,-5.935)
N1: (120.525,82.034,-2.893)
N2: (120.689,84.006,-4.095)
N3: (118.590,83.121,-3.749)
N7: (117.485,80.162,-2.027)
N9: (116.586,81.877,-3.166)
O5': (113.462,79.630,-3.363)
O3': (114.240,81.267,-6.842)
OP1: (131.814,83.643,-0.386)
OP2: (129.679,82.299,0.050)
C3': (127.938,85.754,-3.316)
C1': (127.208,83.788,-4.367)
C5': (130.251,84.717,-2.855)
O4': (128.625,83.757,-4.358)
C8: (127.363,82.455,-2.206)
O2': (126.763,85.885,-5.481)
C6: (124.141,81.290,-1.518)
C5: (125.375,81.827,-1.926)
C4: (125.384,82.571,-3.098)
P: (130.605,82.961,-0.897)
C4': (129.156,85.014,-3.865)
C2': (126.814,85.249,-4.218)
C2: (123.239,82.286,-3.411)
N1: (123.073,81.544,-2.304)
N3: (124.343,82.842,-3.898)
N6: (123.985,80.556,-0.412)
N7: (126.635,81.759,-1.370)
N9: (126.683,82.971,-3.274)
O5': (129.725,83.993,-1.746)
O3': (128.083,87.170,-3.379)
OP2: (129.679,82.299,0.050)
C3': (127.938,85.754,-3.316)
C1': (127.208,83.788,-4.367)
C5': (130.251,84.717,-2.855)
O4': (128.625,83.757,-4.358)
C8: (127.363,82.455,-2.206)
O2': (126.763,85.885,-5.481)
C6: (124.141,81.290,-1.518)
C5: (125.375,81.827,-1.926)
C4: (125.384,82.571,-3.098)
P: (130.605,82.961,-0.897)
C4': (129.156,85.014,-3.865)
C2': (126.814,85.249,-4.218)
C2: (123.239,82.286,-3.411)
N1: (123.073,81.544,-2.304)
N3: (124.343,82.842,-3.898)
N6: (123.985,80.556,-0.412)
N7: (126.635,81.759,-1.370)
N9: (126.683,82.971,-3.274)
O5': (129.725,83.993,-1.746)
O3': (128.083,87.170,-3.379)
Image (generated by PyMOL):