Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02037:02494
Extra
PDB:
ATOM 1 O3' G A2036 54.771 149.089 109.171 1.00 41.57 O
ATOM 2 P G A2037 55.709 148.666 107.932 1.00 42.31 P
ATOM 3 OP1 G A2037 56.689 149.759 107.777 1.00 42.54 O
ATOM 4 OP2 G A2037 54.904 148.238 106.766 1.00 44.75 O
ATOM 5 O5' G A2037 56.495 147.402 108.478 1.00 40.63 O
ATOM 6 C5' G A2037 57.245 147.487 109.698 1.00 39.94 C
ATOM 7 C4' G A2037 57.074 146.225 110.502 1.00 39.23 C
ATOM 8 O4' G A2037 55.688 146.076 110.911 1.00 39.12 O
ATOM 9 C3' G A2037 57.328 144.946 109.739 1.00 39.52 C
ATOM 10 O3' G A2037 58.703 144.687 109.547 1.00 38.76 O
ATOM 11 C2' G A2037 56.610 143.920 110.600 1.00 38.97 C
ATOM 12 O2' G A2037 57.310 143.586 111.778 1.00 41.45 O
ATOM 13 C1' G A2037 55.356 144.699 110.978 1.00 37.91 C
ATOM 14 N9 G A2037 54.275 144.437 110.039 1.00 37.91 N
ATOM 15 C8 G A2037 54.146 144.907 108.752 1.00 38.37 C
ATOM 16 N7 G A2037 53.080 144.456 108.146 1.00 39.34 N
ATOM 17 C5 G A2037 52.463 143.645 109.095 1.00 40.18 C
ATOM 18 C6 G A2037 51.273 142.863 109.021 1.00 37.89 C
ATOM 19 O6 G A2037 50.491 142.729 108.072 1.00 38.90 O
ATOM 20 N1 G A2037 51.031 142.196 110.211 1.00 34.59 N
ATOM 21 C2 G A2037 51.814 142.267 111.328 1.00 35.37 C
ATOM 22 N2 G A2037 51.409 141.564 112.373 1.00 35.79 N
ATOM 23 N3 G A2037 52.914 142.979 111.416 1.00 37.95 N
ATOM 24 C4 G A2037 53.183 143.636 110.271 1.00 39.43 C
ATOM 25 P G A2038 59.137 143.604 108.463 1.00 37.06 P
ATOM 26 OP1 G A2038 60.610 143.502 108.521 1.00 37.81 O
ATOM 27 OP2 G A2038 58.479 143.949 107.189 1.00 36.14 O
ATOM 28 O5' G A2038 58.471 142.293 109.058 1.00 34.46 O
TER
ATOM 1 O3' U B2493 41.491 134.655 108.911 1.00 38.81 O
ATOM 2 P A B2494 41.297 135.511 110.255 1.00 39.28 P
ATOM 3 OP1 A B2494 40.427 134.695 111.161 1.00 38.98 O
ATOM 4 OP2 A B2494 40.876 136.885 109.883 1.00 40.75 O
ATOM 5 O5' A B2494 42.764 135.587 110.875 1.00 40.00 O
ATOM 6 C5' A B2494 43.321 134.459 111.592 1.00 38.68 C
ATOM 7 C4' A B2494 44.667 134.807 112.171 1.00 36.31 C
ATOM 8 O4' A B2494 45.594 135.099 111.099 1.00 37.99 O
ATOM 9 C3' A B2494 44.728 136.055 113.021 1.00 36.78 C
ATOM 10 O3' A B2494 44.236 135.806 114.323 1.00 38.01 O
ATOM 11 C2' A B2494 46.216 136.381 112.996 1.00 37.71 C
ATOM 12 O2' A B2494 47.005 135.584 113.858 1.00 37.90 O
ATOM 13 C1' A B2494 46.571 136.015 111.557 1.00 37.60 C
ATOM 14 N9 A B2494 46.589 137.171 110.669 1.00 38.06 N
ATOM 15 C8 A B2494 45.639 137.607 109.784 1.00 38.40 C
ATOM 16 N7 A B2494 45.977 138.699 109.144 1.00 38.98 N
ATOM 17 C5 A B2494 47.236 139.000 109.642 1.00 39.09 C
ATOM 18 C6 A B2494 48.137 140.043 109.377 1.00 39.18 C
ATOM 19 N6 A B2494 47.918 141.015 108.488 1.00 38.81 N
ATOM 20 N1 A B2494 49.294 140.053 110.064 1.00 39.35 N
ATOM 21 C2 A B2494 49.529 139.079 110.944 1.00 38.16 C
ATOM 22 N3 A B2494 48.773 138.046 111.272 1.00 39.08 N
ATOM 23 C4 A B2494 47.623 138.066 110.580 1.00 39.12 C
ATOM 24 P C B2495 43.242 136.862 115.013 1.00 39.36 P
ATOM 25 OP1 C B2495 42.456 136.107 116.013 1.00 39.59 O
ATOM 26 OP2 C B2495 42.544 137.665 113.980 1.00 40.30 O
ATOM 27 O5' C B2495 44.200 137.861 115.783 1.00 38.34 O
TER
ATOM 2 P G A2037 55.709 148.666 107.932 1.00 42.31 P
ATOM 3 OP1 G A2037 56.689 149.759 107.777 1.00 42.54 O
ATOM 4 OP2 G A2037 54.904 148.238 106.766 1.00 44.75 O
ATOM 5 O5' G A2037 56.495 147.402 108.478 1.00 40.63 O
ATOM 6 C5' G A2037 57.245 147.487 109.698 1.00 39.94 C
ATOM 7 C4' G A2037 57.074 146.225 110.502 1.00 39.23 C
ATOM 8 O4' G A2037 55.688 146.076 110.911 1.00 39.12 O
ATOM 9 C3' G A2037 57.328 144.946 109.739 1.00 39.52 C
ATOM 10 O3' G A2037 58.703 144.687 109.547 1.00 38.76 O
ATOM 11 C2' G A2037 56.610 143.920 110.600 1.00 38.97 C
ATOM 12 O2' G A2037 57.310 143.586 111.778 1.00 41.45 O
ATOM 13 C1' G A2037 55.356 144.699 110.978 1.00 37.91 C
ATOM 14 N9 G A2037 54.275 144.437 110.039 1.00 37.91 N
ATOM 15 C8 G A2037 54.146 144.907 108.752 1.00 38.37 C
ATOM 16 N7 G A2037 53.080 144.456 108.146 1.00 39.34 N
ATOM 17 C5 G A2037 52.463 143.645 109.095 1.00 40.18 C
ATOM 18 C6 G A2037 51.273 142.863 109.021 1.00 37.89 C
ATOM 19 O6 G A2037 50.491 142.729 108.072 1.00 38.90 O
ATOM 20 N1 G A2037 51.031 142.196 110.211 1.00 34.59 N
ATOM 21 C2 G A2037 51.814 142.267 111.328 1.00 35.37 C
ATOM 22 N2 G A2037 51.409 141.564 112.373 1.00 35.79 N
ATOM 23 N3 G A2037 52.914 142.979 111.416 1.00 37.95 N
ATOM 24 C4 G A2037 53.183 143.636 110.271 1.00 39.43 C
ATOM 25 P G A2038 59.137 143.604 108.463 1.00 37.06 P
ATOM 26 OP1 G A2038 60.610 143.502 108.521 1.00 37.81 O
ATOM 27 OP2 G A2038 58.479 143.949 107.189 1.00 36.14 O
ATOM 28 O5' G A2038 58.471 142.293 109.058 1.00 34.46 O
TER
ATOM 1 O3' U B2493 41.491 134.655 108.911 1.00 38.81 O
ATOM 2 P A B2494 41.297 135.511 110.255 1.00 39.28 P
ATOM 3 OP1 A B2494 40.427 134.695 111.161 1.00 38.98 O
ATOM 4 OP2 A B2494 40.876 136.885 109.883 1.00 40.75 O
ATOM 5 O5' A B2494 42.764 135.587 110.875 1.00 40.00 O
ATOM 6 C5' A B2494 43.321 134.459 111.592 1.00 38.68 C
ATOM 7 C4' A B2494 44.667 134.807 112.171 1.00 36.31 C
ATOM 8 O4' A B2494 45.594 135.099 111.099 1.00 37.99 O
ATOM 9 C3' A B2494 44.728 136.055 113.021 1.00 36.78 C
ATOM 10 O3' A B2494 44.236 135.806 114.323 1.00 38.01 O
ATOM 11 C2' A B2494 46.216 136.381 112.996 1.00 37.71 C
ATOM 12 O2' A B2494 47.005 135.584 113.858 1.00 37.90 O
ATOM 13 C1' A B2494 46.571 136.015 111.557 1.00 37.60 C
ATOM 14 N9 A B2494 46.589 137.171 110.669 1.00 38.06 N
ATOM 15 C8 A B2494 45.639 137.607 109.784 1.00 38.40 C
ATOM 16 N7 A B2494 45.977 138.699 109.144 1.00 38.98 N
ATOM 17 C5 A B2494 47.236 139.000 109.642 1.00 39.09 C
ATOM 18 C6 A B2494 48.137 140.043 109.377 1.00 39.18 C
ATOM 19 N6 A B2494 47.918 141.015 108.488 1.00 38.81 N
ATOM 20 N1 A B2494 49.294 140.053 110.064 1.00 39.35 N
ATOM 21 C2 A B2494 49.529 139.079 110.944 1.00 38.16 C
ATOM 22 N3 A B2494 48.773 138.046 111.272 1.00 39.08 N
ATOM 23 C4 A B2494 47.623 138.066 110.580 1.00 39.12 C
ATOM 24 P C B2495 43.242 136.862 115.013 1.00 39.36 P
ATOM 25 OP1 C B2495 42.456 136.107 116.013 1.00 39.59 O
ATOM 26 OP2 C B2495 42.544 137.665 113.980 1.00 40.30 O
ATOM 27 O5' C B2495 44.200 137.861 115.783 1.00 38.34 O
TER
Atoms:
OP1: (56.689,149.759,107.777)
OP2: (54.904,148.238,106.766)
C3': (57.328,144.946,109.739)
C1': (55.356,144.699,110.978)
C5': (57.245,147.487,109.698)
O6: (50.491,142.729,108.072)
O4': (55.688,146.076,110.911)
C8: (54.146,144.907,108.752)
C2: (51.814,142.267,111.328)
C6: (51.273,142.863,109.021)
C5: (52.463,143.645,109.095)
C4: (53.183,143.636,110.271)
P: (55.709,148.666,107.932)
C4': (57.074,146.225,110.502)
C2': (56.610,143.920,110.600)
O2': (57.310,143.586,111.778)
N1: (51.031,142.196,110.211)
N2: (51.409,141.564,112.373)
N3: (52.914,142.979,111.416)
N7: (53.080,144.456,108.146)
N9: (54.275,144.437,110.039)
O5': (56.495,147.402,108.478)
O3': (58.703,144.687,109.547)
OP2: (54.904,148.238,106.766)
C3': (57.328,144.946,109.739)
C1': (55.356,144.699,110.978)
C5': (57.245,147.487,109.698)
O6: (50.491,142.729,108.072)
O4': (55.688,146.076,110.911)
C8: (54.146,144.907,108.752)
C2: (51.814,142.267,111.328)
C6: (51.273,142.863,109.021)
C5: (52.463,143.645,109.095)
C4: (53.183,143.636,110.271)
P: (55.709,148.666,107.932)
C4': (57.074,146.225,110.502)
C2': (56.610,143.920,110.600)
O2': (57.310,143.586,111.778)
N1: (51.031,142.196,110.211)
N2: (51.409,141.564,112.373)
N3: (52.914,142.979,111.416)
N7: (53.080,144.456,108.146)
N9: (54.275,144.437,110.039)
O5': (56.495,147.402,108.478)
O3': (58.703,144.687,109.547)
OP1: (40.427,134.695,111.161)
OP2: (40.876,136.885,109.883)
C3': (44.728,136.055,113.021)
C1': (46.571,136.015,111.557)
C5': (43.321,134.459,111.592)
O4': (45.594,135.099,111.099)
C8: (45.639,137.607,109.784)
O2': (47.005,135.584,113.858)
C6: (48.137,140.043,109.377)
C5: (47.236,139.000,109.642)
C4: (47.623,138.066,110.580)
P: (41.297,135.511,110.255)
C4': (44.667,134.807,112.171)
C2': (46.216,136.381,112.996)
C2: (49.529,139.079,110.944)
N1: (49.294,140.053,110.064)
N3: (48.773,138.046,111.272)
N6: (47.918,141.015,108.488)
N7: (45.977,138.699,109.144)
N9: (46.589,137.171,110.669)
O5': (42.764,135.587,110.875)
O3': (44.236,135.806,114.323)
OP2: (40.876,136.885,109.883)
C3': (44.728,136.055,113.021)
C1': (46.571,136.015,111.557)
C5': (43.321,134.459,111.592)
O4': (45.594,135.099,111.099)
C8: (45.639,137.607,109.784)
O2': (47.005,135.584,113.858)
C6: (48.137,140.043,109.377)
C5: (47.236,139.000,109.642)
C4: (47.623,138.066,110.580)
P: (41.297,135.511,110.255)
C4': (44.667,134.807,112.171)
C2': (46.216,136.381,112.996)
C2: (49.529,139.079,110.944)
N1: (49.294,140.053,110.064)
N3: (48.773,138.046,111.272)
N6: (47.918,141.015,108.488)
N7: (45.977,138.699,109.144)
N9: (46.589,137.171,110.669)
O5': (42.764,135.587,110.875)
O3': (44.236,135.806,114.323)
Image (generated by PyMOL):