Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1977:A2328
Extra
PDB:
ATOM 1 O3' A A1976 -78.931 -63.308 18.729 1.00 0.79 O
ATOM 2 P G A1977 -79.456 -61.782 18.701 1.00 0.79 P
ATOM 3 OP1 G A1977 -78.682 -61.079 19.760 1.00 0.79 O
ATOM 4 OP2 G A1977 -80.966 -61.728 18.706 1.00 0.79 O
ATOM 5 O5' G A1977 -78.936 -61.236 17.298 1.00 6.03 O
ATOM 6 C5' G A1977 -79.806 -61.111 16.170 1.00 6.03 C
ATOM 7 C4' G A1977 -79.953 -59.661 15.819 1.00 6.03 C
ATOM 8 O4' G A1977 -80.532 -59.533 14.494 1.00 6.03 O
ATOM 9 C3' G A1977 -80.848 -58.873 16.771 1.00 6.03 C
ATOM 10 O3' G A1977 -80.335 -57.548 16.999 1.00 6.03 O
ATOM 11 C2' G A1977 -82.161 -58.792 16.003 1.00 6.03 C
ATOM 12 O2' G A1977 -82.948 -57.683 16.382 1.00 6.03 O
ATOM 13 C1' G A1977 -81.668 -58.699 14.556 1.00 6.03 C
ATOM 14 N9 G A1977 -82.636 -59.182 13.587 1.00 15.76 N
ATOM 15 C8 G A1977 -83.232 -60.412 13.586 1.00 15.76 C
ATOM 16 N7 G A1977 -84.123 -60.550 12.646 1.00 15.76 N
ATOM 17 C5 G A1977 -84.097 -59.343 11.972 1.00 15.76 C
ATOM 18 C6 G A1977 -84.861 -58.907 10.870 1.00 15.76 C
ATOM 19 O6 G A1977 -85.757 -59.526 10.257 1.00 15.76 O
ATOM 20 N1 G A1977 -84.509 -57.614 10.494 1.00 15.76 N
ATOM 21 C2 G A1977 -83.551 -56.851 11.110 1.00 15.76 C
ATOM 22 N2 G A1977 -83.353 -55.640 10.595 1.00 15.76 N
ATOM 23 N3 G A1977 -82.840 -57.248 12.152 1.00 15.76 N
ATOM 24 C4 G A1977 -83.164 -58.494 12.528 1.00 15.76 C
ATOM 25 P A A1978 -80.539 -56.834 18.437 1.00 26.14 P
ATOM 26 OP1 A A1978 -79.563 -57.413 19.396 1.00126.27 O
ATOM 27 OP2 A A1978 -81.983 -56.816 18.788 1.00126.27 O
ATOM 28 O5' A A1978 -80.096 -55.340 18.154 1.00 21.28 O
TER
ATOM 1 O3' A B2327 -96.331 -53.839 9.594 1.00 5.51 O
ATOM 2 P A B2328 -95.927 -54.461 8.169 1.00 23.24 P
ATOM 3 OP1 A B2328 -96.953 -54.054 7.179 1.00 42.14 O
ATOM 4 OP2 A B2328 -95.619 -55.895 8.359 1.00 42.14 O
ATOM 5 O5' A B2328 -94.554 -53.743 7.800 1.00 0.79 O
ATOM 6 C5' A B2328 -94.481 -52.314 7.710 1.00 0.79 C
ATOM 7 C4' A B2328 -93.074 -51.890 7.436 1.00 0.79 C
ATOM 8 O4' A B2328 -92.249 -52.141 8.592 1.00 0.79 O
ATOM 9 C3' A B2328 -92.399 -52.661 6.326 1.00 0.79 C
ATOM 10 O3' A B2328 -92.761 -52.132 5.066 1.00 0.79 O
ATOM 11 C2' A B2328 -90.923 -52.475 6.646 1.00 0.79 C
ATOM 12 O2' A B2328 -90.396 -51.249 6.181 1.00 0.79 O
ATOM 13 C1' A B2328 -90.936 -52.459 8.173 1.00 0.79 C
ATOM 14 N9 A B2328 -90.543 -53.746 8.744 1.00 9.94 N
ATOM 15 C8 A B2328 -91.331 -54.746 9.256 1.00 9.94 C
ATOM 16 N7 A B2328 -90.652 -55.799 9.658 1.00 9.94 N
ATOM 17 C5 A B2328 -89.337 -55.462 9.393 1.00 9.94 C
ATOM 18 C6 A B2328 -88.144 -56.150 9.576 1.00 9.94 C
ATOM 19 N6 A B2328 -88.073 -57.379 10.074 1.00 9.94 N
ATOM 20 N1 A B2328 -87.002 -55.535 9.222 1.00 9.94 N
ATOM 21 C2 A B2328 -87.076 -54.313 8.714 1.00 9.94 C
ATOM 22 N3 A B2328 -88.143 -53.563 8.482 1.00 9.94 N
ATOM 23 C4 A B2328 -89.254 -54.202 8.847 1.00 9.94 C
ATOM 24 P C B2329 -93.206 -53.129 3.886 1.00 13.13 P
ATOM 25 OP1 C B2329 -93.479 -52.329 2.658 1.00 24.12 O
ATOM 26 OP2 C B2329 -94.268 -54.018 4.437 1.00 24.12 O
ATOM 27 O5' C B2329 -91.877 -53.949 3.609 1.00 3.13 O
TER
ATOM 2 P G A1977 -79.456 -61.782 18.701 1.00 0.79 P
ATOM 3 OP1 G A1977 -78.682 -61.079 19.760 1.00 0.79 O
ATOM 4 OP2 G A1977 -80.966 -61.728 18.706 1.00 0.79 O
ATOM 5 O5' G A1977 -78.936 -61.236 17.298 1.00 6.03 O
ATOM 6 C5' G A1977 -79.806 -61.111 16.170 1.00 6.03 C
ATOM 7 C4' G A1977 -79.953 -59.661 15.819 1.00 6.03 C
ATOM 8 O4' G A1977 -80.532 -59.533 14.494 1.00 6.03 O
ATOM 9 C3' G A1977 -80.848 -58.873 16.771 1.00 6.03 C
ATOM 10 O3' G A1977 -80.335 -57.548 16.999 1.00 6.03 O
ATOM 11 C2' G A1977 -82.161 -58.792 16.003 1.00 6.03 C
ATOM 12 O2' G A1977 -82.948 -57.683 16.382 1.00 6.03 O
ATOM 13 C1' G A1977 -81.668 -58.699 14.556 1.00 6.03 C
ATOM 14 N9 G A1977 -82.636 -59.182 13.587 1.00 15.76 N
ATOM 15 C8 G A1977 -83.232 -60.412 13.586 1.00 15.76 C
ATOM 16 N7 G A1977 -84.123 -60.550 12.646 1.00 15.76 N
ATOM 17 C5 G A1977 -84.097 -59.343 11.972 1.00 15.76 C
ATOM 18 C6 G A1977 -84.861 -58.907 10.870 1.00 15.76 C
ATOM 19 O6 G A1977 -85.757 -59.526 10.257 1.00 15.76 O
ATOM 20 N1 G A1977 -84.509 -57.614 10.494 1.00 15.76 N
ATOM 21 C2 G A1977 -83.551 -56.851 11.110 1.00 15.76 C
ATOM 22 N2 G A1977 -83.353 -55.640 10.595 1.00 15.76 N
ATOM 23 N3 G A1977 -82.840 -57.248 12.152 1.00 15.76 N
ATOM 24 C4 G A1977 -83.164 -58.494 12.528 1.00 15.76 C
ATOM 25 P A A1978 -80.539 -56.834 18.437 1.00 26.14 P
ATOM 26 OP1 A A1978 -79.563 -57.413 19.396 1.00126.27 O
ATOM 27 OP2 A A1978 -81.983 -56.816 18.788 1.00126.27 O
ATOM 28 O5' A A1978 -80.096 -55.340 18.154 1.00 21.28 O
TER
ATOM 1 O3' A B2327 -96.331 -53.839 9.594 1.00 5.51 O
ATOM 2 P A B2328 -95.927 -54.461 8.169 1.00 23.24 P
ATOM 3 OP1 A B2328 -96.953 -54.054 7.179 1.00 42.14 O
ATOM 4 OP2 A B2328 -95.619 -55.895 8.359 1.00 42.14 O
ATOM 5 O5' A B2328 -94.554 -53.743 7.800 1.00 0.79 O
ATOM 6 C5' A B2328 -94.481 -52.314 7.710 1.00 0.79 C
ATOM 7 C4' A B2328 -93.074 -51.890 7.436 1.00 0.79 C
ATOM 8 O4' A B2328 -92.249 -52.141 8.592 1.00 0.79 O
ATOM 9 C3' A B2328 -92.399 -52.661 6.326 1.00 0.79 C
ATOM 10 O3' A B2328 -92.761 -52.132 5.066 1.00 0.79 O
ATOM 11 C2' A B2328 -90.923 -52.475 6.646 1.00 0.79 C
ATOM 12 O2' A B2328 -90.396 -51.249 6.181 1.00 0.79 O
ATOM 13 C1' A B2328 -90.936 -52.459 8.173 1.00 0.79 C
ATOM 14 N9 A B2328 -90.543 -53.746 8.744 1.00 9.94 N
ATOM 15 C8 A B2328 -91.331 -54.746 9.256 1.00 9.94 C
ATOM 16 N7 A B2328 -90.652 -55.799 9.658 1.00 9.94 N
ATOM 17 C5 A B2328 -89.337 -55.462 9.393 1.00 9.94 C
ATOM 18 C6 A B2328 -88.144 -56.150 9.576 1.00 9.94 C
ATOM 19 N6 A B2328 -88.073 -57.379 10.074 1.00 9.94 N
ATOM 20 N1 A B2328 -87.002 -55.535 9.222 1.00 9.94 N
ATOM 21 C2 A B2328 -87.076 -54.313 8.714 1.00 9.94 C
ATOM 22 N3 A B2328 -88.143 -53.563 8.482 1.00 9.94 N
ATOM 23 C4 A B2328 -89.254 -54.202 8.847 1.00 9.94 C
ATOM 24 P C B2329 -93.206 -53.129 3.886 1.00 13.13 P
ATOM 25 OP1 C B2329 -93.479 -52.329 2.658 1.00 24.12 O
ATOM 26 OP2 C B2329 -94.268 -54.018 4.437 1.00 24.12 O
ATOM 27 O5' C B2329 -91.877 -53.949 3.609 1.00 3.13 O
TER
Atoms:
OP1: (-78.682,-61.079,19.760)
OP2: (-80.966,-61.728,18.706)
C3': (-80.848,-58.873,16.771)
C1': (-81.668,-58.699,14.556)
C5': (-79.806,-61.111,16.170)
O6: (-85.757,-59.526,10.257)
O4': (-80.532,-59.533,14.494)
C8: (-83.232,-60.412,13.586)
C2: (-83.551,-56.851,11.110)
C6: (-84.861,-58.907,10.870)
C5: (-84.097,-59.343,11.972)
C4: (-83.164,-58.494,12.528)
P: (-79.456,-61.782,18.701)
C4': (-79.953,-59.661,15.819)
C2': (-82.161,-58.792,16.003)
O2': (-82.948,-57.683,16.382)
N1: (-84.509,-57.614,10.494)
N2: (-83.353,-55.640,10.595)
N3: (-82.840,-57.248,12.152)
N7: (-84.123,-60.550,12.646)
N9: (-82.636,-59.182,13.587)
O5': (-78.936,-61.236,17.298)
O3': (-80.335,-57.548,16.999)
OP2: (-80.966,-61.728,18.706)
C3': (-80.848,-58.873,16.771)
C1': (-81.668,-58.699,14.556)
C5': (-79.806,-61.111,16.170)
O6: (-85.757,-59.526,10.257)
O4': (-80.532,-59.533,14.494)
C8: (-83.232,-60.412,13.586)
C2: (-83.551,-56.851,11.110)
C6: (-84.861,-58.907,10.870)
C5: (-84.097,-59.343,11.972)
C4: (-83.164,-58.494,12.528)
P: (-79.456,-61.782,18.701)
C4': (-79.953,-59.661,15.819)
C2': (-82.161,-58.792,16.003)
O2': (-82.948,-57.683,16.382)
N1: (-84.509,-57.614,10.494)
N2: (-83.353,-55.640,10.595)
N3: (-82.840,-57.248,12.152)
N7: (-84.123,-60.550,12.646)
N9: (-82.636,-59.182,13.587)
O5': (-78.936,-61.236,17.298)
O3': (-80.335,-57.548,16.999)
OP1: (-96.953,-54.054,7.179)
OP2: (-95.619,-55.895,8.359)
C3': (-92.399,-52.661,6.326)
C1': (-90.936,-52.459,8.173)
C5': (-94.481,-52.314,7.710)
O4': (-92.249,-52.141,8.592)
C8: (-91.331,-54.746,9.256)
O2': (-90.396,-51.249,6.181)
C6: (-88.144,-56.150,9.576)
C5: (-89.337,-55.462,9.393)
C4: (-89.254,-54.202,8.847)
P: (-95.927,-54.461,8.169)
C4': (-93.074,-51.890,7.436)
C2': (-90.923,-52.475,6.646)
C2: (-87.076,-54.313,8.714)
N1: (-87.002,-55.535,9.222)
N3: (-88.143,-53.563,8.482)
N6: (-88.073,-57.379,10.074)
N7: (-90.652,-55.799,9.658)
N9: (-90.543,-53.746,8.744)
O5': (-94.554,-53.743,7.800)
O3': (-92.761,-52.132,5.066)
OP2: (-95.619,-55.895,8.359)
C3': (-92.399,-52.661,6.326)
C1': (-90.936,-52.459,8.173)
C5': (-94.481,-52.314,7.710)
O4': (-92.249,-52.141,8.592)
C8: (-91.331,-54.746,9.256)
O2': (-90.396,-51.249,6.181)
C6: (-88.144,-56.150,9.576)
C5: (-89.337,-55.462,9.393)
C4: (-89.254,-54.202,8.847)
P: (-95.927,-54.461,8.169)
C4': (-93.074,-51.890,7.436)
C2': (-90.923,-52.475,6.646)
C2: (-87.076,-54.313,8.714)
N1: (-87.002,-55.535,9.222)
N3: (-88.143,-53.563,8.482)
N6: (-88.073,-57.379,10.074)
N7: (-90.652,-55.799,9.658)
N9: (-90.543,-53.746,8.744)
O5': (-94.554,-53.743,7.800)
O3': (-92.761,-52.132,5.066)
Image (generated by PyMOL):