Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11257:11139
Extra
PDB:
ATOM 1 O3' C A1256 49.223 19.772 23.038 1.00 40.47 O
ATOM 2 P G A1257 47.884 20.216 22.343 1.00 36.08 P
ATOM 3 OP1 G A1257 47.971 21.664 22.056 1.00 36.39 O
ATOM 4 OP2 G A1257 46.819 19.743 23.201 1.00 35.80 O
ATOM 5 O5' G A1257 47.875 19.368 21.002 1.00 36.29 O
ATOM 6 C5' G A1257 48.547 19.772 19.833 1.00 36.66 C
ATOM 7 C4' G A1257 49.160 18.570 19.175 1.00 36.65 C
ATOM 8 O4' G A1257 49.132 17.467 20.109 1.00 36.22 O
ATOM 9 C3' G A1257 48.460 18.003 17.959 1.00 36.91 C
ATOM 10 O3' G A1257 48.748 18.703 16.784 1.00 37.36 O
ATOM 11 C2' G A1257 48.979 16.576 17.931 1.00 36.71 C
ATOM 12 O2' G A1257 50.307 16.524 17.441 1.00 36.82 O
ATOM 13 C1' G A1257 49.017 16.244 19.406 1.00 36.24 C
ATOM 14 N9 G A1257 47.801 15.531 19.857 1.00 36.04 N
ATOM 15 C8 G A1257 46.769 15.996 20.635 1.00 35.91 C
ATOM 16 N7 G A1257 45.822 15.129 20.872 1.00 35.76 N
ATOM 17 C5 G A1257 46.264 14.032 20.197 1.00 35.79 C
ATOM 18 C6 G A1257 45.664 12.795 20.123 1.00 35.67 C
ATOM 19 O6 G A1257 44.625 12.514 20.670 1.00 35.52 O
ATOM 20 N1 G A1257 46.366 11.876 19.380 1.00 35.76 N
ATOM 21 C2 G A1257 47.538 12.183 18.786 1.00 35.93 C
ATOM 22 N2 G A1257 48.078 11.186 18.127 1.00 36.00 N
ATOM 23 N3 G A1257 48.162 13.355 18.826 1.00 36.05 N
ATOM 24 C4 G A1257 47.466 14.237 19.572 1.00 35.96 C
ATOM 25 P C A1258 47.804 18.561 15.501 1.00 40.49 P
ATOM 26 OP1 C A1258 48.263 19.554 14.489 1.00 40.94 O
ATOM 27 OP2 C A1258 46.415 18.644 16.008 1.00 40.39 O
ATOM 28 O5' C A1258 48.094 17.103 14.983 1.00 40.43 O
TER
ATOM 1 O3' G B1138 38.957 3.373 17.652 1.00 44.97 O
ATOM 2 P A B1139 39.210 2.969 19.162 1.00 40.77 P
ATOM 3 OP1 A B1139 38.696 1.597 19.341 1.00 40.67 O
ATOM 4 OP2 A B1139 38.641 4.071 19.992 1.00 40.63 O
ATOM 5 O5' A B1139 40.798 2.958 19.231 1.00 40.67 O
ATOM 6 C5' A B1139 41.509 2.060 18.399 1.00 40.83 C
ATOM 7 C4' A B1139 42.945 2.406 18.296 1.00 40.82 C
ATOM 8 O4' A B1139 43.087 3.654 17.584 1.00 41.10 O
ATOM 9 C3' A B1139 43.639 2.650 19.597 1.00 40.43 C
ATOM 10 O3' A B1139 43.974 1.445 20.271 1.00 40.17 O
ATOM 11 C2' A B1139 44.836 3.487 19.161 1.00 40.57 C
ATOM 12 O2' A B1139 45.818 2.679 18.552 1.00 40.67 O
ATOM 13 C1' A B1139 44.193 4.370 18.085 1.00 40.95 C
ATOM 14 N9 A B1139 43.711 5.643 18.665 1.00 40.89 N
ATOM 15 C8 A B1139 42.618 5.808 19.465 1.00 40.71 C
ATOM 16 N7 A B1139 42.448 7.019 19.904 1.00 40.69 N
ATOM 17 C5 A B1139 43.520 7.710 19.366 1.00 40.86 C
ATOM 18 C6 A B1139 43.923 9.037 19.495 1.00 40.93 C
ATOM 19 N6 A B1139 43.256 9.933 20.198 1.00 40.84 N
ATOM 20 N1 A B1139 45.035 9.414 18.871 1.00 41.11 N
ATOM 21 C2 A B1139 45.683 8.493 18.169 1.00 41.21 C
ATOM 22 N3 A B1139 45.428 7.203 17.962 1.00 41.16 N
ATOM 23 C4 A B1139 44.306 6.874 18.605 1.00 40.98 C
ATOM 24 P C B1140 44.184 1.430 21.870 1.00 73.37 P
ATOM 25 OP1 C B1140 42.864 1.604 22.490 1.00 73.25 O
ATOM 26 OP2 C B1140 45.269 2.398 22.184 1.00 73.31 O
ATOM 27 O5' C B1140 44.688 -0.010 22.147 1.00 73.22 O
TER
ATOM 2 P G A1257 47.884 20.216 22.343 1.00 36.08 P
ATOM 3 OP1 G A1257 47.971 21.664 22.056 1.00 36.39 O
ATOM 4 OP2 G A1257 46.819 19.743 23.201 1.00 35.80 O
ATOM 5 O5' G A1257 47.875 19.368 21.002 1.00 36.29 O
ATOM 6 C5' G A1257 48.547 19.772 19.833 1.00 36.66 C
ATOM 7 C4' G A1257 49.160 18.570 19.175 1.00 36.65 C
ATOM 8 O4' G A1257 49.132 17.467 20.109 1.00 36.22 O
ATOM 9 C3' G A1257 48.460 18.003 17.959 1.00 36.91 C
ATOM 10 O3' G A1257 48.748 18.703 16.784 1.00 37.36 O
ATOM 11 C2' G A1257 48.979 16.576 17.931 1.00 36.71 C
ATOM 12 O2' G A1257 50.307 16.524 17.441 1.00 36.82 O
ATOM 13 C1' G A1257 49.017 16.244 19.406 1.00 36.24 C
ATOM 14 N9 G A1257 47.801 15.531 19.857 1.00 36.04 N
ATOM 15 C8 G A1257 46.769 15.996 20.635 1.00 35.91 C
ATOM 16 N7 G A1257 45.822 15.129 20.872 1.00 35.76 N
ATOM 17 C5 G A1257 46.264 14.032 20.197 1.00 35.79 C
ATOM 18 C6 G A1257 45.664 12.795 20.123 1.00 35.67 C
ATOM 19 O6 G A1257 44.625 12.514 20.670 1.00 35.52 O
ATOM 20 N1 G A1257 46.366 11.876 19.380 1.00 35.76 N
ATOM 21 C2 G A1257 47.538 12.183 18.786 1.00 35.93 C
ATOM 22 N2 G A1257 48.078 11.186 18.127 1.00 36.00 N
ATOM 23 N3 G A1257 48.162 13.355 18.826 1.00 36.05 N
ATOM 24 C4 G A1257 47.466 14.237 19.572 1.00 35.96 C
ATOM 25 P C A1258 47.804 18.561 15.501 1.00 40.49 P
ATOM 26 OP1 C A1258 48.263 19.554 14.489 1.00 40.94 O
ATOM 27 OP2 C A1258 46.415 18.644 16.008 1.00 40.39 O
ATOM 28 O5' C A1258 48.094 17.103 14.983 1.00 40.43 O
TER
ATOM 1 O3' G B1138 38.957 3.373 17.652 1.00 44.97 O
ATOM 2 P A B1139 39.210 2.969 19.162 1.00 40.77 P
ATOM 3 OP1 A B1139 38.696 1.597 19.341 1.00 40.67 O
ATOM 4 OP2 A B1139 38.641 4.071 19.992 1.00 40.63 O
ATOM 5 O5' A B1139 40.798 2.958 19.231 1.00 40.67 O
ATOM 6 C5' A B1139 41.509 2.060 18.399 1.00 40.83 C
ATOM 7 C4' A B1139 42.945 2.406 18.296 1.00 40.82 C
ATOM 8 O4' A B1139 43.087 3.654 17.584 1.00 41.10 O
ATOM 9 C3' A B1139 43.639 2.650 19.597 1.00 40.43 C
ATOM 10 O3' A B1139 43.974 1.445 20.271 1.00 40.17 O
ATOM 11 C2' A B1139 44.836 3.487 19.161 1.00 40.57 C
ATOM 12 O2' A B1139 45.818 2.679 18.552 1.00 40.67 O
ATOM 13 C1' A B1139 44.193 4.370 18.085 1.00 40.95 C
ATOM 14 N9 A B1139 43.711 5.643 18.665 1.00 40.89 N
ATOM 15 C8 A B1139 42.618 5.808 19.465 1.00 40.71 C
ATOM 16 N7 A B1139 42.448 7.019 19.904 1.00 40.69 N
ATOM 17 C5 A B1139 43.520 7.710 19.366 1.00 40.86 C
ATOM 18 C6 A B1139 43.923 9.037 19.495 1.00 40.93 C
ATOM 19 N6 A B1139 43.256 9.933 20.198 1.00 40.84 N
ATOM 20 N1 A B1139 45.035 9.414 18.871 1.00 41.11 N
ATOM 21 C2 A B1139 45.683 8.493 18.169 1.00 41.21 C
ATOM 22 N3 A B1139 45.428 7.203 17.962 1.00 41.16 N
ATOM 23 C4 A B1139 44.306 6.874 18.605 1.00 40.98 C
ATOM 24 P C B1140 44.184 1.430 21.870 1.00 73.37 P
ATOM 25 OP1 C B1140 42.864 1.604 22.490 1.00 73.25 O
ATOM 26 OP2 C B1140 45.269 2.398 22.184 1.00 73.31 O
ATOM 27 O5' C B1140 44.688 -0.010 22.147 1.00 73.22 O
TER
Atoms:
OP1: (47.971,21.664,22.056)
OP2: (46.819,19.743,23.201)
C3': (48.460,18.003,17.959)
C1': (49.017,16.244,19.406)
C5': (48.547,19.772,19.833)
O6: (44.625,12.514,20.670)
O4': (49.132,17.467,20.109)
C8: (46.769,15.996,20.635)
C2: (47.538,12.183,18.786)
C6: (45.664,12.795,20.123)
C5: (46.264,14.032,20.197)
C4: (47.466,14.237,19.572)
P: (47.884,20.216,22.343)
C4': (49.160,18.570,19.175)
C2': (48.979,16.576,17.931)
O2': (50.307,16.524,17.441)
N1: (46.366,11.876,19.380)
N2: (48.078,11.186,18.127)
N3: (48.162,13.355,18.826)
N7: (45.822,15.129,20.872)
N9: (47.801,15.531,19.857)
O5': (47.875,19.368,21.002)
O3': (48.748,18.703,16.784)
OP2: (46.819,19.743,23.201)
C3': (48.460,18.003,17.959)
C1': (49.017,16.244,19.406)
C5': (48.547,19.772,19.833)
O6: (44.625,12.514,20.670)
O4': (49.132,17.467,20.109)
C8: (46.769,15.996,20.635)
C2: (47.538,12.183,18.786)
C6: (45.664,12.795,20.123)
C5: (46.264,14.032,20.197)
C4: (47.466,14.237,19.572)
P: (47.884,20.216,22.343)
C4': (49.160,18.570,19.175)
C2': (48.979,16.576,17.931)
O2': (50.307,16.524,17.441)
N1: (46.366,11.876,19.380)
N2: (48.078,11.186,18.127)
N3: (48.162,13.355,18.826)
N7: (45.822,15.129,20.872)
N9: (47.801,15.531,19.857)
O5': (47.875,19.368,21.002)
O3': (48.748,18.703,16.784)
OP1: (38.696,1.597,19.341)
OP2: (38.641,4.071,19.992)
C3': (43.639,2.650,19.597)
C1': (44.193,4.370,18.085)
C5': (41.509,2.060,18.399)
O4': (43.087,3.654,17.584)
C8: (42.618,5.808,19.465)
O2': (45.818,2.679,18.552)
C6: (43.923,9.037,19.495)
C5: (43.520,7.710,19.366)
C4: (44.306,6.874,18.605)
P: (39.210,2.969,19.162)
C4': (42.945,2.406,18.296)
C2': (44.836,3.487,19.161)
C2: (45.683,8.493,18.169)
N1: (45.035,9.414,18.871)
N3: (45.428,7.203,17.962)
N6: (43.256,9.933,20.198)
N7: (42.448,7.019,19.904)
N9: (43.711,5.643,18.665)
O5': (40.798,2.958,19.231)
O3': (43.974,1.445,20.271)
OP2: (38.641,4.071,19.992)
C3': (43.639,2.650,19.597)
C1': (44.193,4.370,18.085)
C5': (41.509,2.060,18.399)
O4': (43.087,3.654,17.584)
C8: (42.618,5.808,19.465)
O2': (45.818,2.679,18.552)
C6: (43.923,9.037,19.495)
C5: (43.520,7.710,19.366)
C4: (44.306,6.874,18.605)
P: (39.210,2.969,19.162)
C4': (42.945,2.406,18.296)
C2': (44.836,3.487,19.161)
C2: (45.683,8.493,18.169)
N1: (45.035,9.414,18.871)
N3: (45.428,7.203,17.962)
N6: (43.256,9.933,20.198)
N7: (42.448,7.019,19.904)
N9: (43.711,5.643,18.665)
O5': (40.798,2.958,19.231)
O3': (43.974,1.445,20.271)
Image (generated by PyMOL):